Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 1.8e-137 492.7 268 100.0
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 7.2e-33 145.2 333 39.0
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 2.6e-30 136.7 308 41.9
Migut.C01082 Erythranthe guttata HOM05D007988 ORTHO05D009824 2.8e-29 133.3 310 42.6
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 3.7e-29 132.9 319 41.1
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 2.7e-27 126.7 306 40.5
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 3.5e-27 126.3 326 39.9
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 3.5e-27 126.3 326 39.9
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 5.9e-27 125.6 293 36.9
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 5.9e-27 125.6 301 41.5
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 5.9e-27 125.6 317 42.0
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 7.7e-27 125.2 309 40.5
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 7.7e-27 125.2 319 38.2
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 1.3e-26 124.4 312 41.0
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 2.9e-26 123.2 309 39.2
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 2.9e-26 123.2 326 39.6
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 3.2e-25 119.8 310 37.4
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 9.4e-25 118.2 318 37.4
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 1.2e-24 117.9 301 40.5
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 2.1e-24 117.1 315 34.6
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 3.6e-24 116.3 314 36.3
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 6.1e-24 115.5 286 40.6
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 2.3e-23 113.6 305 38.4
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 3.0e-23 113.2 314 37.6
Eucgr.F02525 Eucalyptus grandis HOM05D007988 ORTHO05D009824 4.0e-23 112.8 334 36.8
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 4.0e-23 112.8 304 38.2
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 1.2e-22 111.3 326 39.9
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 1.2e-22 111.3 298 39.3
CiPaw.16G021200 Carya illinoinensis HOM05D007988 ORTHO05D009824 2.0e-22 110.5 311 37.6
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 2.0e-22 110.5 301 39.2
Nn1g08990 Nelumbo nucifera HOM05D007988 ORTHO05D009824 3.4e-22 109.8 305 32.1
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 3.4e-22 109.8 307 37.8
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 7.5e-22 108.6 317 39.7
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 2.8e-21 106.7 310 38.7
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 4.8e-21 105.9 312 38.1
Nn5g28477 Nelumbo nucifera HOM05D007988 ORTHO05D009824 4.8e-21 105.9 313 37.1
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 6.3e-21 105.5 332 36.1
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 1.4e-20 104.4 285 39.6
FAN27G1764 Fragaria x ananassa HOM05D007988 ORTHO05D009824 5.9e-19 99.0 302 40.4
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 7.7e-19 98.6 320 36.2
Sopen04g026140 Solanum pennellii HOM05D007988 ORTHO05D009824 6.6e-18 95.5 332 36.4
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 1.9e-17 94.0 332 35.2
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 3.3e-17 93.2 308 35.7
Psat0s3071g0240 Pisum sativum HOM05D007988 ORTHO05D009824 9.5e-17 91.7 208 38.0
DCAR_003597 Daucus carota HOM05D007988 ORTHO05D009824 1.2e-16 91.3 310 39.0
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 4.7e-16 89.4 204 40.2
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 6.1e-16 89.0 316 35.8
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 8.0e-16 88.6 311 32.8
Cpa.g.sc64.159 Carica papaya HOM05D007988 ORTHO05D009824 1.0e-15 88.2 340 37.4
HanXRQChr09g0256671 Helianthus annuus HOM05D007988 ORTHO05D009824 1.8e-15 87.4 290 33.8
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 2.3e-15 87.0 307 34.2
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 8.9e-15 85.1 337 32.9
arahy.Tifrunner.gnm1.ann1.1JY9DA Arachis hypogaea HOM05D007988 ORTHO05D009824 1.2e-14 84.7 310 34.5
arahy.Tifrunner.gnm1.ann1.GX31L7 Arachis hypogaea HOM05D007988 ORTHO05D009824 1.2e-14 84.7 309 34.3
CANSAT25G2204 Cannabis sativa HOM05D007988 ORTHO05D009824 1.5e-14 84.3 372 30.4
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 2.8e-13 80.1 321 32.7
AUR62007686 Chenopodium quinoa HOM05D007988 ORTHO05D009824 1.4e-12 77.8 235 32.8
MBI06_g32176_MAGBIO Magnolia biondii HOM05D007988 ORTHO05D009824 2.4e-12 77.0 189 41.3
ECA232G2067 Erigeron canadensis HOM05D007988 ORTHO05D009824 7.0e-12 75.5 306 33.0
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 1.2e-11 74.7 331 33.8
Sed0016946 Sechium edule HOM05D007988 ORTHO05D009824 1.6e-11 74.3 286 32.2
PGSC0003DMG400002385 Solanum tuberosum HOM05D007988 ORTHO05D009824 5.9e-11 72.4 194 38.1
THA.LOC104813286 Tarenaya hassleriana HOM05D012069 ORTHO05D009824 2.9e-10 70.1 321 29.6
MELO3C008455.2 Cucumis melo HOM05D007988 ORTHO05D009824 3.9e-10 69.7 286 31.1
Aqoxy5G02290 Aquilegia oxysepala HOM05D007988 ORTHO05D009824 6.6e-10 68.9 173 40.5
EL10Ac1g01385 Beta vulgaris HOM05D007988 ORTHO05D009824 2.8e-08 63.5 351 32.5
AT1G21510 Arabidopsis thaliana HOM05D012069 ORTHO05D009824 6.1e-08 62.4 324 28.1
FAN20G0590 Fragaria x ananassa HOM05D007988 ORTHO05D009824 8.0e-08 62.0 142 40.1
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 3.1e-07 60.1 183 39.3
ClCG08G006150 Citrullus lanatus HOM05D007988 ORTHO05D009824 6.8e-07 58.9 283 30.4
Lalb_Chr04g0253601 Lupinus albus HOM05D007988 ORTHO05D009824 7.5e-06 55.5 153 35.3
Carub.0001s2093 Capsella rubella HOM05D012069 ORTHO05D009824 9.8e-06 55.1 341 29.3


User provided reference genes

Program Settings