Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold528G52732 Striga asiatica HOM05D004615 ORTHO05D000385 1.3e-140 503.1 254 100.0
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 5.2e-49 198.7 440 35.0
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 9.2e-30 134.8 168 44.6
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 1.7e-28 130.6 201 37.8
SGA_v2.0_scaffold279G46788 Striga asiatica HOM05D004615 ORTHO05D000385 2.4e-25 120.2 153 43.8
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.2e-25 119.0 202 35.6
AUR62037964 Chenopodium quinoa HOM05D014060 ORTHO05D000385 7.6e-24 115.2 202 35.6
SGA_v2.0_scaffold11G05529 Striga asiatica HOM05D004615 ORTHO05D000385 7.6e-24 115.2 129 47.3
AUR62031351 Chenopodium quinoa HOM05D014060 ORTHO05D000385 6.4e-23 112.1 201 35.3
AUR62027608 Chenopodium quinoa HOM05D014060 ORTHO05D000385 2.4e-22 110.2 134 43.3
AUR62027663 Chenopodium quinoa HOM05D014060 ORTHO05D000385 9.3e-22 108.2 134 42.5
AUR62004861 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-21 105.9 78 53.8
AUR62040355 Chenopodium quinoa HOM05D014060 ORTHO05D000385 4.6e-21 105.9 123 42.3
AUR62024348 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.0e-20 103.2 194 32.5
SGA_v2.0_scaffold251G45054 Striga asiatica HOM05D004615 ORTHO05D000385 1.1e-19 101.3 385 26.2
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 1.6e-18 97.4 212 29.2
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 2.1e-18 97.1 212 29.2
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 2.8e-18 96.7 166 32.5
AUR62042476 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.8e-18 96.7 76 53.9
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 2.8e-18 96.7 213 31.0
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 4.8e-18 95.9 165 32.7
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 4.8e-18 95.9 165 32.7
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 6.2e-18 95.5 165 32.7
AUR62005789 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.1e-18 95.1 85 48.2
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 2.4e-17 93.6 165 32.1
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 5.3e-17 92.4 145 34.5
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 6.9e-17 92.0 165 31.5
AUR62035483 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.2e-16 91.3 144 36.8
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.0e-16 90.5 92 42.4
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.0e-16 90.5 98 42.9
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 3.4e-16 89.7 165 32.1
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 4.5e-16 89.4 145 33.1
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 5.8e-16 89.0 87 51.7
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 1.3e-15 87.8 79 49.4
AUR62002779 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.7e-15 87.4 225 32.0
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 2.2e-15 87.0 113 37.2
Sc07g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.8e-15 86.3 149 34.2
AUR62037174 Chenopodium quinoa HOM05D009343 ORTHO05D000385 4.9e-15 85.9 213 29.1
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.9e-15 85.9 148 33.8
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 6.4e-15 85.5 174 30.5
AUR62030145 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.4e-15 85.1 96 41.7
AUR62031112 Chenopodium quinoa HOM05D009343 ORTHO05D000385 8.4e-15 85.1 216 29.2
AUR62037264 Chenopodium quinoa HOM05D004615 ORTHO05D000062 8.4e-15 85.1 87 44.8
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.1e-14 84.7 91 44.0
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 1.9e-14 84.0 170 31.8
AUR62040424 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.4e-14 83.6 86 44.2
Hund03863 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.4e-14 83.6 209 29.2
AUR62042814 Chenopodium quinoa HOM05D010065 ORTHO05D000385 3.2e-14 83.2 135 37.8
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 3.2e-14 83.2 201 30.8
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.2e-14 83.2 132 33.3
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.2e-14 82.8 95 44.2
AUR62036837 Chenopodium quinoa HOM05D009343 ORTHO05D011970 4.2e-14 82.8 102 37.3
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 7.1e-14 82.0 96 40.6
AUR62013324 Chenopodium quinoa HOM05D010065 ORTHO05D000385 9.3e-14 81.6 135 37.0
Sc06g0003990 Simmondsia chinensis HOM05D004615 ORTHO05D000385 9.3e-14 81.6 131 38.9
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.2e-13 81.3 116 37.1
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.2e-13 81.3 76 47.4
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 3.5e-13 79.7 199 29.6
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-13 79.3 85 43.5
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-13 79.3 121 36.4
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 4.6e-13 79.3 192 30.7
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 6.0e-13 79.0 98 40.8
AUR62043436 Chenopodium quinoa HOM05D009343 ORTHO05D000385 6.0e-13 79.0 78 46.2
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 6.0e-13 79.0 147 32.7
AUR62002100 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.0e-12 78.2 207 27.5
AUR62040771 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.0e-12 78.2 85 42.4
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-12 77.8 85 42.4
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-12 77.8 85 42.4
AUR62032537 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.3e-12 77.8 189 29.1
AUR62036502 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.8e-12 77.4 191 28.8
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.8e-12 77.4 188 30.9
AUR62006471 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.3e-12 77.0 95 40.0
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-12 77.0 85 42.4
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 2.3e-12 77.0 166 28.3
AUR62031149 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.0e-12 76.6 149 34.2
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 3.0e-12 76.6 136 34.6
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 3.0e-12 76.6 104 39.4
Sc22g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.9e-12 76.3 67 53.7
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 3.9e-12 76.3 149 30.9
AUR62037194 Chenopodium quinoa HOM05D009343 ORTHO05D011970 8.7e-12 75.1 189 30.7
Sc20g0003820 Simmondsia chinensis HOM05D004615 ORTHO05D000385 8.7e-12 75.1 144 33.3
PGSC0003DMG400046273 Solanum tuberosum HOM05D008041 ORTHO05D000385 8.7e-12 75.1 170 28.8
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-11 74.7 89 39.3
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 1.1e-11 74.7 95 38.9
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 1.1e-11 74.7 159 31.4
Sc11g0005200 Simmondsia chinensis HOM05D014970 ORTHO05D019369 1.1e-11 74.7 119 34.5
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 1.1e-11 74.7 191 28.3
AUR62022305 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.5e-11 74.3 78 42.3
AUR62034499 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.5e-11 74.3 85 44.7
AUR62037118 Chenopodium quinoa HOM05D010065 ORTHO05D000385 1.5e-11 74.3 91 42.9
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 2.5e-11 73.6 98 38.8
Psat0s776g0040 Pisum sativum HOM05D004615 ORTHO05D000385 2.5e-11 73.6 100 36.0
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.3e-11 73.2 148 30.4
HanXRQChr02g0040071 Helianthus annuus HOM05D004615 ORTHO05D000385 4.3e-11 72.8 86 44.2
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 5.6e-11 72.4 96 38.5
AUR62041732 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.4e-11 72.0 160 31.2
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 7.4e-11 72.0 98 38.8
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 7.4e-11 72.0 148 30.4
Psat5g250640 Pisum sativum HOM05D008859 ORTHO05D007166 7.4e-11 72.0 164 28.0
Sc09g0007350 Simmondsia chinensis HOM05D009343 ORTHO05D000385 7.4e-11 72.0 83 45.8
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 9.6e-11 71.6 192 28.6
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 9.6e-11 71.6 90 38.9
Psat7g143560 Pisum sativum HOM05D008859 ORTHO05D000385 9.6e-11 71.6 157 28.7
Sc08g0005540 Simmondsia chinensis HOM05D004615 ORTHO05D000385 1.3e-10 71.2 77 41.6
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.1e-10 70.5 163 31.3
Sc03g0005370 Simmondsia chinensis HOM05D009343 ORTHO05D000385 2.1e-10 70.5 69 47.8
Sopen08g013620 Solanum pennellii HOM05D008041 ORTHO05D000385 2.1e-10 70.5 147 30.6
AUR62042260 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.6e-10 69.7 86 39.5
Psat0s130g0040 Pisum sativum HOM05D008859 ORTHO05D000385 6.2e-10 68.9 182 26.9
AUR62010806 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.1e-10 68.6 150 28.0
AUR62019804 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.1e-10 68.6 151 28.5
AUR62026239 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.1e-10 68.6 79 43.0
AUR62028446 Chenopodium quinoa HOM05D009343 ORTHO05D011970 8.1e-10 68.6 83 38.6
AUR62022712 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.4e-09 67.8 112 31.2
Sc22g0004480 Simmondsia chinensis HOM05D014970 ORTHO05D000385 1.8e-09 67.4 136 30.1
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 1.8e-09 67.4 85 38.8
Hund03726 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.4e-09 67.0 81 39.5
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.1e-09 66.6 125 32.8
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 3.1e-09 66.6 125 32.8
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 3.1e-09 66.6 125 32.8
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 3.1e-09 66.6 125 32.8
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 3.1e-09 66.6 125 32.8
Sc18g0005230 Simmondsia chinensis HOM05D010414 ORTHO05D000385 4.0e-09 66.2 60 53.3
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 4.0e-09 66.2 131 35.9
EL10Ac1g01725 Beta vulgaris HOM05D004615 ORTHO05D000385 5.3e-09 65.9 82 41.5
AUR62019515 Chenopodium quinoa HOM05D010065 ORTHO05D000385 5.3e-09 65.9 77 45.5
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 5.3e-09 65.9 94 36.2
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 5.3e-09 65.9 175 26.9
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 9.0e-09 65.1 125 32.0
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 9.0e-09 65.1 125 32.0
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 9.0e-09 65.1 111 32.4
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 1.2e-08 64.7 125 32.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.5e-08 64.3 98 37.8
AUR62029474 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.0e-08 63.9 65 46.2
SGA_v2.0_scaffold107G30768 Striga asiatica HOM05D004615 ORTHO05D000385 2.0e-08 63.9 97 39.2
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.6e-08 63.5 95 37.9
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.6e-08 63.5 81 39.5
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 3.4e-08 63.2 111 31.5
AUR62042034 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.5e-08 62.8 65 47.7
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.5e-08 62.8 94 35.1
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.8e-08 62.4 109 34.9
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 5.8e-08 62.4 127 28.3
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 5.8e-08 62.4 115 35.7
Solyc01g034040.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 7.6e-08 62.0 94 35.1
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.9e-08 61.6 174 28.2
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 9.9e-08 61.6 110 30.0
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.3e-07 61.2 85 38.8
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 1.3e-07 61.2 123 33.3
DCAR_023704 Daucus carota HOM05D004615 ORTHO05D000385 1.7e-07 60.8 90 35.6
Solyc10g018713.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.7e-07 60.8 112 33.0
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.2e-07 60.5 145 31.0
arahy.Tifrunner.gnm1.ann1.JJQZ3I Arachis hypogaea HOM05D009636 ORTHO05D011783 2.9e-07 60.1 121 36.4
PGSC0003DMG400034515 Solanum tuberosum HOM05D008041 ORTHO05D000385 2.9e-07 60.1 148 30.4
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.8e-07 59.7 148 29.7
AUR62015616 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.8e-07 59.7 66 39.4
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 3.8e-07 59.7 104 33.7
Hund12189 Selenicereus undatus HOM05D004615 ORTHO05D000385 3.8e-07 59.7 62 40.3
Thecc.02G018900 Theobroma cacao HOM05D005763 ORTHO05D005970 3.8e-07 59.7 98 37.8
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 4.9e-07 59.3 97 38.1
PGSC0003DMG400042422 Solanum tuberosum HOM05D008041 ORTHO05D000385 4.9e-07 59.3 79 34.2
ECA248G3239 Erigeron canadensis HOM05D004615 ORTHO05D000385 6.4e-07 58.9 186 27.4
AUR62027501 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.4e-07 58.5 67 41.8
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 8.4e-07 58.5 132 29.5
EL10Ac9g20762 Beta vulgaris HOM05D004615 ORTHO05D000385 1.4e-06 57.8 171 29.2
AUR62020674 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-06 57.8 62 46.8
DCAR_031271 Daucus carota HOM05D022224 ORTHO05D000385 1.4e-06 57.8 128 32.8
AUR62029526 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.9e-06 57.4 107 29.0
Medtr7g027580 Medicago truncatula HOM05D010482 ORTHO05D000385 1.9e-06 57.4 78 38.5
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 1.9e-06 57.4 171 22.8
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.9e-06 57.4 112 33.0
Solyc05g032825.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.4e-06 57.0 94 33.0
Solyc07g020915.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.4e-06 57.0 116 33.6
Sopen04g010730 Solanum pennellii HOM05D008041 ORTHO05D000385 2.4e-06 57.0 87 34.5
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 3.2e-06 56.6 138 31.9
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.2e-06 56.6 125 30.4
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 3.2e-06 56.6 101 31.7
Solyc11g042873.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.2e-06 56.2 73 42.5
AUR62039813 Chenopodium quinoa HOM05D009343 ORTHO05D011970 5.5e-06 55.8 149 30.2
AUR62041975 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.5e-06 55.8 268 25.4
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 5.5e-06 55.8 135 31.9
MBI08_g25554_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.5e-06 55.8 115 33.0
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.3e-06 55.1 92 34.8


User provided reference genes

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