Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold5289G54624 Striga asiatica HOM05D046958 ORTHO05D025248 7.7e-52 206.8 102 100.0
SGA_v2.0_scaffold129G34157 Striga asiatica HOM05D046958 ORTHO05D025248 2.5e-42 175.3 86 97.7
SGA_v2.0_scaffold132G34549 Striga asiatica HOM05D000026 ORTHO05D001436 3.1e-21 105.1 70 75.7
Migut.D02008 Erythranthe guttata HOM05D000026 ORTHO05D001436 6.4e-14 80.9 66 63.6
PGSC0003DMG401009415 Solanum tuberosum HOM05D000026 ORTHO05D001436 1.2e-12 76.6 65 61.5
Peaxi162Scf00981g00110 Petunia axillaris HOM05D000026 ORTHO05D001436 2.0e-12 75.9 71 56.3
CAN.G883.11 Capsicum annuum HOM05D000026 ORTHO05D001436 4.6e-12 74.7 65 60.0
Nitab4.5_0011544g0040 Nicotiana tabacum HOM05D000026 ORTHO05D001436 4.6e-12 74.7 65 58.5
Solyc02g068300.3 Solanum lycopersicum HOM05D000026 ORTHO05D001436 4.6e-12 74.7 65 58.5
Sopen02g017400 Solanum pennellii HOM05D000026 ORTHO05D001436 4.6e-12 74.7 65 58.5
Oeu023347.1 Olea europaea HOM05D000026 ORTHO05D001436 2.3e-11 72.4 71 54.9
Nitab4.5_0012341g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001436 3.9e-11 71.6 65 61.5
Nitab4.5_0000304g0060 Nicotiana tabacum HOM05D000026 ORTHO05D001436 8.6e-11 70.5 73 50.7
Dinv19110 Davidia involucrata HOM05D000026 ORTHO05D001436 4.3e-10 68.2 73 53.4
Nitab4.5_0007373g0020 Nicotiana tabacum HOM05D000026 ORTHO05D001436 4.3e-10 68.2 73 46.6
PGSC0003DMG400018677 Solanum tuberosum HOM05D000026 ORTHO05D001436 4.3e-10 68.2 67 52.2
Solyc03g031980.4 Solanum lycopersicum HOM05D000026 ORTHO05D001436 5.6e-10 67.8 66 51.5
vmacro18481 Vaccinium macrocarpon HOM05D000026 ORTHO05D001436 5.6e-10 67.8 65 58.5
Actinidia35693 Actinidia chinensis HOM05D000026 ORTHO05D001436 7.3e-10 67.4 69 50.7
Hund03556 Selenicereus undatus HOM05D000026 ORTHO05D001436 7.3e-10 67.4 66 60.6
Nitab4.5_0000304g0040 Nicotiana tabacum HOM05D000026 ORTHO05D001436 1.6e-09 66.2 64 53.1
Potri.001G455500 Populus trichocarpa HOM05D000026 ORTHO05D001436 1.6e-09 66.2 67 50.7
Sopen03g005830 Solanum pennellii HOM05D000026 ORTHO05D001436 1.6e-09 66.2 66 50.0
Sopen12g018640 Solanum pennellii HOM05D000026 ORTHO05D001436 1.6e-09 66.2 66 50.0
CAN.G801.16 Capsicum annuum HOM05D000026 ORTHO05D001436 3.6e-09 65.1 73 49.3
Cc07_g12360 Coffea canephora HOM05D000026 ORTHO05D001436 3.6e-09 65.1 67 53.7
Eucgr.L02496 Eucalyptus grandis HOM05D000026 ORTHO05D001436 3.6e-09 65.1 64 53.1
Dinv28287 Davidia involucrata HOM05D000026 ORTHO05D001436 6.2e-09 64.3 68 52.9
Sabra11G0131400 Salix brachista HOM05D000026 ORTHO05D001436 8.0e-09 63.9 65 47.7
Sabra16G0308100 Salix brachista HOM05D000026 ORTHO05D001436 1.4e-08 63.2 67 49.3
CANSAT56G1422 Cannabis sativa HOM05D000026 ORTHO05D001436 1.8e-08 62.8 64 50.0
Potri.011G146500 Populus trichocarpa HOM05D000026 ORTHO05D001436 1.8e-08 62.8 65 47.7
Nitab4.5_0004507g0010 Nicotiana tabacum HOM05D000026 ORTHO05D001436 3.1e-08 62.0 61 52.5
AUR62003328 Chenopodium quinoa HOM05D000026 ORTHO05D001436 4.0e-08 61.6 73 50.7
AUR62029521 Chenopodium quinoa HOM05D000026 ORTHO05D001436 4.0e-08 61.6 72 50.0
Nitab4.5_0002860g0030 Nicotiana tabacum HOM05D000026 ORTHO05D001436 4.0e-08 61.6 61 52.5
Nitab4.5_0008108g0020 Nicotiana tabacum HOM05D000026 ORTHO05D001436 4.0e-08 61.6 64 48.4
Hma1.2p1_0085F.1_g044200 Hydrangea macrophylla HOM05D000026 ORTHO05D001436 5.2e-08 61.2 61 52.5
Dinv23636 Davidia involucrata HOM05D043598 ORTHO05D025248 6.8e-08 60.8 60 55.0
RcHm_v2.0_Chr2g0096621 Rosa chinensis HOM05D000026 ORTHO05D001436 6.8e-08 60.8 75 45.3
EL10Ac6g14720 Beta vulgaris HOM05D000026 ORTHO05D001436 8.9e-08 60.5 73 50.7
Cfa007122 Carpinus fangiana HOM05D000026 ORTHO05D001436 8.9e-08 60.5 73 46.6
GSVIVG01026418001 Vitis vinifera HOM05D000026 ORTHO05D001436 8.9e-08 60.5 66 54.5
Haze_03651 Corylus avellana HOM05D000026 ORTHO05D001436 2.0e-07 59.3 73 46.6
Eucgr.J02577 Eucalyptus grandis HOM05D000026 ORTHO05D001436 2.0e-07 59.3 65 52.3
Manes.02G117800 Manihot esculenta HOM05D000026 ORTHO05D001436 2.6e-07 58.9 68 50.0
PGR119G1866 Punica granatum HOM05D000026 ORTHO05D001436 2.6e-07 58.9 64 53.1
MBI04_g23328_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D001436 3.4e-07 58.5 66 45.5
Thecc.04G122600 Theobroma cacao HOM05D000026 ORTHO05D001436 3.4e-07 58.5 69 49.3
QL06p053545 Quercus lobata HOM05D000026 ORTHO05D001436 4.4e-07 58.2 69 52.2
Peaxi162Scf00918g00415 Petunia axillaris HOM05D000026 ORTHO05D001436 5.8e-07 57.8 69 49.3
Prupe.7G188700 Prunus persica HOM05D000026 ORTHO05D001436 5.8e-07 57.8 75 44.0
Rhsim10G0190000 Rhododendron simsii HOM05D000026 ORTHO05D001436 5.8e-07 57.8 62 43.5
Hund19675 Selenicereus undatus HOM05D000026 ORTHO05D001436 5.8e-07 57.8 64 53.1
TWI09G0726 Tripterygium wilfordii HOM05D000026 ORTHO05D001436 5.8e-07 57.8 57 56.1
ATR0605G290 Amborella trichopoda HOM05D000026 ORTHO05D001436 1.3e-06 56.6 58 46.6
Gohir.A07G076600 Gossypium hirsutum HOM05D000026 ORTHO05D001436 2.2e-06 55.8 65 47.7
Lj4A246T77 Lonicera japonica HOM05D000026 ORTHO05D001436 2.2e-06 55.8 67 44.8
Lj2g0015695 Lotus japonicus HOM05D000026 ORTHO05D001436 2.2e-06 55.8 72 45.8
Ah.02g119240 Amaranthus hybridus HOM05D000026 ORTHO05D001436 2.9e-06 55.5 72 45.8
Eucgr.J02576 Eucalyptus grandis HOM05D000026 ORTHO05D001436 2.9e-06 55.5 63 50.8
TPR.G33751 Trifolium pratense HOM05D000026 ORTHO05D001436 3.7e-06 55.1 57 47.4
CiPaw.05G095700 Carya illinoinensis HOM05D000026 ORTHO05D001436 6.4e-06 54.3 64 40.6
Gohir.D07G081400 Gossypium hirsutum HOM05D000026 ORTHO05D001436 6.4e-06 54.3 65 46.2
Gorai.001G086500 Gossypium raimondii HOM05D000026 ORTHO05D001436 6.4e-06 54.3 65 46.2
MD15G1226500 Malus domestica HOM05D000026 ORTHO05D001436 6.4e-06 54.3 74 44.6
Rhsim08G0025000 Rhododendron simsii HOM05D000026 ORTHO05D001436 6.4e-06 54.3 73 45.2
Peaxi162Scf00920g00026 Petunia axillaris HOM05D000026 ORTHO05D001436 8.3e-06 53.9 74 40.5


User provided reference genes

Program Settings