Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold521G52700 Striga asiatica HOM05D004280 ORTHO05D005059 1.1e-105 386.7 200 100.0
SGA_v2.0_scaffold674G53431 Striga asiatica HOM05D004280 ORTHO05D005059 1.1e-105 386.7 200 100.0
SGA_v2.0_scaffold674G53436 Striga asiatica HOM05D004280 ORTHO05D005059 8.4e-103 377.1 200 97.5
SGA_v2.0_scaffold329G48825 Striga asiatica HOM05D004280 ORTHO05D005059 5.1e-92 341.3 200 91.5
SGA_v2.0_scaffold552G52891 Striga asiatica HOM05D004280 ORTHO05D005059 6.7e-92 340.9 199 91.5
SGA_v2.0_scaffold693G53465 Striga asiatica HOM05D004280 ORTHO05D005059 1.9e-91 339.3 199 91.0
SGA_v2.0_scaffold738G53541 Striga asiatica HOM05D004280 ORTHO05D005059 4.3e-91 338.2 200 90.5
MSTRG.18872 Avicennia marina HOM05D004280 ORTHO05D005059 1.6e-69 266.5 219 72.6
SalBow6G7108 Salvia bowleyana HOM05D004280 ORTHO05D005059 5.7e-67 258.1 219 70.3
SGA_v2.0_scaffold13G06338 Striga asiatica HOM05D004280 ORTHO05D005059 6.3e-66 254.6 153 88.9
Migut.D02547 Erythranthe guttata HOM05D004280 ORTHO05D005059 8.2e-66 254.2 220 70.0
CSS0019811 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 1.2e-61 240.4 209 66.5
Dinv23876 Davidia involucrata HOM05D004280 ORTHO05D005059 1.6e-61 240.0 220 65.5
CSS0019544 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 3.0e-60 235.7 218 63.8
Nn7g35895 Nelumbo nucifera HOM05D004280 ORTHO05D005059 4.0e-60 235.3 215 65.6
SalBow4G3146 Salvia bowleyana HOM05D004280 ORTHO05D005059 6.7e-60 234.6 265 58.5
RcHm_v2.0_Chr5g0083141 Rosa chinensis HOM05D004280 ORTHO05D005059 9.7e-59 230.7 213 62.9
RcHm_v2.0_Chr4g0431981 Rosa chinensis HOM05D004280 ORTHO05D005059 1.7e-58 229.9 213 62.4
Ah.04g157750 Amaranthus hybridus HOM05D004280 ORTHO05D005059 6.3e-58 228.0 207 66.2
RhsimUnG0194900 Rhododendron simsii HOM05D004280 ORTHO05D005059 6.3e-58 228.0 218 63.8
Rhsim09G0027500 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.8e-57 226.5 218 63.3
Cpa.g.sc119.63 Carica papaya HOM05D004280 ORTHO05D005059 7.0e-57 224.6 218 62.4
Ah.04g157660 Amaranthus hybridus HOM05D004280 ORTHO05D005059 1.6e-56 223.4 207 65.2
Lsat_1_v5_gn_6_54260 Lactuca sativa HOM05D004280 ORTHO05D005059 1.6e-56 223.4 189 67.7
FAN21G3004 Fragaria x ananassa HOM05D004280 ORTHO05D005059 3.5e-56 222.2 211 62.6
Sc10g0001010 Simmondsia chinensis HOM05D004280 ORTHO05D005059 5.9e-56 221.5 213 63.4
VMungo0647G2277 Vigna mungo HOM05D004280 ORTHO05D005059 7.7e-56 221.1 217 63.6
Hma1.2p1_0843F.1_g227335 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 1.0e-55 220.7 193 67.4
Hma1.2p1_0843F.1_g227340 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 1.0e-55 220.7 193 67.4
ECA233G4188 Erigeron canadensis HOM05D004280 ORTHO05D005059 1.7e-55 219.9 218 61.9
ECA248G0362 Erigeron canadensis HOM05D004280 ORTHO05D005059 1.7e-55 219.9 220 61.8
vmacro00623 Vaccinium macrocarpon HOM05D004280 ORTHO05D005059 1.7e-55 219.9 225 60.4
ClCG09G019650 Citrullus lanatus HOM05D004280 ORTHO05D005059 2.2e-55 219.5 222 62.2
Lj2A726G7 Lonicera japonica HOM05D004280 ORTHO05D005059 2.2e-55 219.5 221 62.0
Medtr3g083880 Medicago truncatula HOM05D004280 ORTHO05D005059 5.0e-55 218.4 219 62.1
FvH4_3g45340 Fragaria vesca HOM05D004280 ORTHO05D005059 6.5e-55 218.0 221 60.2
SGA_v2.0_scaffold6G03409 Striga asiatica HOM05D004280 ORTHO05D005059 6.5e-55 218.0 157 77.7
Manes.01G036600 Manihot esculenta HOM05D004280 ORTHO05D005059 1.1e-54 217.2 219 62.1
unitig_749.g13584 Utricularia gibba HOM05D004280 ORTHO05D005059 1.1e-54 217.2 178 71.3
CAN.G193.6 Capsicum annuum HOM05D004280 ORTHO05D005059 1.9e-54 216.5 217 59.4
GSVIVG01025433001 Vitis vinifera HOM05D004280 ORTHO05D005059 2.5e-54 216.1 155 76.8
Prupe.6G007100 Prunus persica HOM05D004280 ORTHO05D005059 3.2e-54 215.7 219 58.4
PGR102G2828 Punica granatum HOM05D004280 ORTHO05D005059 4.2e-54 215.3 216 62.0
DCAR_009024 Daucus carota HOM05D004280 ORTHO05D005059 5.5e-54 214.9 222 59.5
Solyc04g076580.4 Solanum lycopersicum HOM05D004280 ORTHO05D005059 7.2e-54 214.5 218 60.6
Glyma.06G309800 Glycine max HOM05D004280 ORTHO05D005059 9.4e-54 214.2 219 62.1
Glyma.14G130400 Glycine max HOM05D004280 ORTHO05D005059 9.4e-54 214.2 219 62.1
Lsat_1_v5_gn_1_67700 Lactuca sativa HOM05D004280 ORTHO05D005059 1.2e-53 213.8 212 62.7
Phvul.001G056600 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 1.2e-53 213.8 218 61.5
TWI60G1521 Tripterygium wilfordii HOM05D004280 ORTHO05D005059 1.6e-53 213.4 216 60.6
Haze_22956 Corylus avellana HOM05D004280 ORTHO05D005059 2.1e-53 213.0 222 59.5
Haze_22962 Corylus avellana HOM05D004280 ORTHO05D005059 2.1e-53 213.0 222 59.5
Lj6g0003060 Lotus japonicus HOM05D004280 ORTHO05D005059 2.7e-53 212.6 218 61.5
Glyma.14G154000 Glycine max HOM05D004280 ORTHO05D005059 3.6e-53 212.2 219 61.6
Aqoxy7G03617 Aquilegia oxysepala HOM05D004280 ORTHO05D005059 4.7e-53 211.8 155 74.2
QL01p008475 Quercus lobata HOM05D004280 ORTHO05D005059 4.7e-53 211.8 220 59.5
TAR623G1159 Trochodendron aralioides HOM05D004280 ORTHO05D005059 1.0e-52 210.7 155 74.2
Ca_16394_v3 Cicer arietinum L. HOM05D004280 ORTHO05D005059 3.0e-52 209.1 218 60.6
TPR.G24159 Trifolium pratense HOM05D004280 ORTHO05D005059 3.0e-52 209.1 225 58.7
CiPaw.13G175600 Carya illinoinensis HOM05D004280 ORTHO05D005059 4.0e-52 208.8 221 59.7
MBI05_g32463_MAGBIO Magnolia biondii HOM05D004280 ORTHO05D005059 4.0e-52 208.8 155 76.1
arahy.Tifrunner.gnm1.ann1.0AF3IJ Arachis hypogaea HOM05D004280 ORTHO05D005059 5.2e-52 208.4 158 74.1
Potri.003G218700 Populus trichocarpa HOM05D004280 ORTHO05D005059 5.2e-52 208.4 219 58.9
Thecc.09G208500 Theobroma cacao HOM05D004280 ORTHO05D005059 8.8e-52 207.6 178 65.7
Atru.chr1.3614 Acer truncatum HOM05D004280 ORTHO05D005059 1.2e-51 207.2 219 58.0
CANSAT01G2556 Cannabis sativa HOM05D004280 ORTHO05D005059 2.0e-51 206.5 224 59.4
Sed0023881 Sechium edule HOM05D004280 ORTHO05D005059 2.0e-51 206.5 155 75.5
PGSC0003DMG401025662 Solanum tuberosum HOM05D004280 ORTHO05D005059 2.0e-51 206.5 154 72.7
Hund03769 Selenicereus undatus HOM05D004280 ORTHO05D005059 2.6e-51 206.1 154 74.7
HPP92_017297 Vanilla planifolia HOM05D004280 ORTHO05D005059 2.6e-51 206.1 155 73.5
Cc01_g00630 Coffea canephora HOM05D004280 ORTHO05D005059 3.4e-51 205.7 156 73.1
FAN16G1471 Fragaria x ananassa HOM05D004280 ORTHO05D005059 3.4e-51 205.7 251 52.2
Peaxi162Scf01112g00112 Petunia axillaris HOM05D004280 ORTHO05D005059 4.4e-51 205.3 213 59.2
Cc05_g01230 Coffea canephora HOM05D004280 ORTHO05D005059 5.7e-51 204.9 156 72.4
Glyma.11G173655 Glycine max HOM05D004280 ORTHO05D005059 9.8e-51 204.1 220 60.9
Zm00001eb233380 Zea mays HOM05D004280 ORTHO05D005059 9.8e-51 204.1 213 58.7
Duzib150G0115 Durio zibethinus HOM05D004280 ORTHO05D005059 1.3e-50 203.8 178 64.0
Psat5g102320 Pisum sativum HOM05D004280 ORTHO05D005059 1.3e-50 203.8 219 59.4
CiPaw.16G086400 Carya illinoinensis HOM05D004280 ORTHO05D005059 1.7e-50 203.4 221 58.4
FAN25G1542 Fragaria x ananassa HOM05D004280 ORTHO05D005059 1.7e-50 203.4 155 71.6
Ciclev10016632m.g Citrus clementina HOM05D004280 ORTHO05D005059 2.8e-50 202.6 220 58.6
Gorai.004G017100 Gossypium raimondii HOM05D004280 ORTHO05D005059 2.8e-50 202.6 173 65.9
MD11G1008600 Malus domestica HOM05D004280 ORTHO05D005059 2.8e-50 202.6 152 70.4
AT1G55300 Arabidopsis thaliana HOM05D004280 ORTHO05D005059 3.7e-50 202.2 220 56.8
MELO3C021620.2 Cucumis melo HOM05D004280 ORTHO05D005059 3.7e-50 202.2 216 59.3
Os05g0347000 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 3.7e-50 202.2 215 59.5
Duzib170G0536 Durio zibethinus HOM05D004280 ORTHO05D005059 8.3e-50 201.1 178 63.5
Manes.04G095700 Manihot esculenta HOM05D004280 ORTHO05D005059 8.3e-50 201.1 219 58.0
Thhalv10011786m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 1.1e-49 200.7 222 56.3
FAN11G0747 Fragaria x ananassa HOM05D004280 ORTHO05D005059 1.1e-49 200.7 155 71.0
Gohir.D08G021800 Gossypium hirsutum HOM05D004280 ORTHO05D005059 1.1e-49 200.7 182 62.6
Gohir.A08G011300 Gossypium hirsutum HOM05D004280 ORTHO05D005059 1.4e-49 200.3 169 66.3
MD03G1005700 Malus domestica HOM05D004280 ORTHO05D005059 1.4e-49 200.3 152 69.7
ATR0681G021 Amborella trichopoda HOM05D004280 ORTHO05D005059 1.8e-49 199.9 155 71.6
BraA05t20650Z Brassica rapa HOM05D004280 ORTHO05D005059 1.8e-49 199.9 227 54.6
COL.COLO4_35029 Corchorus olitorius HOM05D004280 ORTHO05D005059 2.4e-49 199.5 154 69.5
CsaV3_5G026740 Cucumis sativus L. HOM05D004280 ORTHO05D005059 2.4e-49 199.5 216 56.9
Potri.001G006300 Populus trichocarpa HOM05D004280 ORTHO05D005059 2.4e-49 199.5 197 59.9
HanXRQChr13g0405321 Helianthus annuus HOM05D004280 ORTHO05D005059 3.1e-49 199.1 162 69.1
Oeu059672.2 Olea europaea HOM05D004280 ORTHO05D005059 1.6e-48 196.8 138 76.8
Carub.0001s4380 Capsella rubella HOM05D004280 ORTHO05D005059 3.5e-48 195.7 219 55.7
C06p10250 Brassica napus HOM05D004280 ORTHO05D005059 5.9e-48 194.9 200 58.0
Eucgr.B03612 Eucalyptus grandis HOM05D004280 ORTHO05D005059 5.9e-48 194.9 155 71.6
SGA_v2.0_scaffold2280G54098 Striga asiatica HOM05D004280 ORTHO05D005059 5.9e-48 194.9 98 99.0
BcaB02g10831 Brassica carinata HOM05D004280 ORTHO05D005059 1.0e-47 194.1 155 67.7
CARHR044950 Cardamine hirsuta HOM05D004280 ORTHO05D005059 1.0e-47 194.1 222 55.0
PSO210G5203 Papaver somniferum HOM05D004280 ORTHO05D005059 1.7e-47 193.4 158 69.6
PSO761G0405 Papaver somniferum HOM05D004280 ORTHO05D005059 1.7e-47 193.4 158 69.6
Sabra03G0163100 Salix brachista HOM05D004280 ORTHO05D005059 1.7e-47 193.4 155 68.4
Sp1g40960 Schrenkiella parvula HOM05D004280 ORTHO05D005059 1.7e-47 193.4 227 54.6
THA.LOC104822674 Tarenaya hassleriana HOM05D004280 ORTHO05D005059 1.7e-47 193.4 154 68.8
Aa31LG10G1060 Aethionema arabicum HOM05D004280 ORTHO05D005059 2.9e-47 192.6 189 58.7
A05p17570 Brassica napus HOM05D004280 ORTHO05D005059 2.9e-47 192.6 226 54.0
Sabra01G0004700 Salix brachista HOM05D004280 ORTHO05D005059 5.0e-47 191.8 184 59.8
BcaC08g44186 Brassica carinata HOM05D004280 ORTHO05D005059 8.6e-47 191.0 201 58.2
BolC6t36098H Brassica oleracea HOM05D004280 ORTHO05D005059 1.1e-46 190.7 155 66.5
BolC6t36783H Brassica oleracea HOM05D004280 ORTHO05D005059 1.1e-46 190.7 155 67.1
AagrBONN_evm.TU.Sc2ySwM_344.2640 Anthoceros agrestis HOM05D004280 ORTHO05D005059 1.9e-46 189.9 155 66.5
Rhsim02G0077200 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.9e-46 189.9 155 69.0
C06p15910 Brassica napus HOM05D004280 ORTHO05D005059 2.5e-46 189.5 155 65.8
BraA06t23245Z Brassica rapa HOM05D004280 ORTHO05D005059 2.5e-46 189.5 198 57.1
A06p00280 Brassica napus HOM05D004280 ORTHO05D005059 4.2e-46 188.7 155 65.2
Mapoly0011s0044 Marchantia polymorpha HOM05D004280 ORTHO05D005059 1.2e-45 187.2 155 67.1
Zm00001eb059570 Zea mays HOM05D004280 ORTHO05D005059 3.6e-45 185.7 157 66.9
SEGI_26181 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 8.0e-45 184.5 221 52.5
Lalb_Chr08g0230321 Lupinus albus HOM05D004280 ORTHO05D005059 1.0e-44 184.1 167 64.7
Zm00001eb395740 Zea mays HOM05D004280 ORTHO05D005059 1.4e-44 183.7 153 67.3
Os01g0648500 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 4.0e-44 182.2 201 57.2
Pp3c14_18710 Physcomitrium patens HOM05D004280 ORTHO05D005059 4.0e-44 182.2 155 63.2
Nitab4.5_0000131g0050 Nicotiana tabacum HOM05D004280 ORTHO05D005059 5.2e-44 181.8 155 65.8
SEGI_04342 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 8.9e-44 181.0 167 61.1
HanXRQChr01g0021661 Helianthus annuus HOM05D004280 ORTHO05D005059 2.0e-43 179.9 138 71.0
PGSC0003DMG400009351 Solanum tuberosum HOM05D004280 ORTHO05D005059 4.4e-43 178.7 213 54.0
AUR62032745 Chenopodium quinoa HOM05D004280 ORTHO05D005059 7.5e-43 177.9 176 60.8
AUR62015306 Chenopodium quinoa HOM05D004280 ORTHO05D005059 1.7e-42 176.8 191 56.5
Zm00001eb068820 Zea mays HOM05D004280 ORTHO05D005059 4.9e-42 175.3 192 57.3
Pp3c1_41986 Physcomitrium patens HOM05D004280 ORTHO05D005059 6.3e-42 174.9 155 62.6
CBR_g22380 Chara braunii HOM05D004280 ORTHO05D005059 1.3e-39 167.2 195 52.8
SMO146G0138 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 1.5e-38 163.7 156 55.8
Cc01_g02840 Coffea canephora HOM05D004280 ORTHO05D005059 2.5e-38 162.9 156 62.2
Nitab4.5_0006954g0010 Nicotiana tabacum HOM05D004280 ORTHO05D005059 8.0e-37 157.9 137 65.0
AL1G63340 Arabidopsis lyrata HOM05D004280 ORTHO05D005059 1.4e-36 157.1 157 59.9
Cfa009582 Carpinus fangiana HOM05D004280 ORTHO05D005059 1.4e-36 157.1 235 48.1
Phvul.001G056500 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 2.3e-36 156.4 155 62.6
Sed0016974 Sechium edule HOM05D004280 ORTHO05D005059 2.3e-36 156.4 189 52.4
Cc00_g23960 Coffea canephora HOM05D004280 ORTHO05D005059 3.0e-36 156.0 96 83.3
SMO169G0010 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 1.1e-33 147.5 156 53.2
Haze_22967 Corylus avellana HOM05D004280 ORTHO05D005059 9.2e-33 144.4 122 65.6
Actinidia11301 Actinidia chinensis HOM05D004280 ORTHO05D005059 1.1e-30 137.5 106 71.7
Dinv13451 Davidia involucrata HOM05D004280 ORTHO05D005059 1.9e-30 136.7 109 68.8
Glyma.17G202802 Glycine max HOM05D004280 ORTHO05D005059 1.2e-27 127.5 82 81.7
Atru.chr7.1077 Acer truncatum HOM05D004280 ORTHO05D005059 1.6e-24 117.1 131 55.0
Zm00001eb211560 Zea mays HOM05D004280 ORTHO05D005059 1.7e-23 113.6 159 50.3
Sopen00g013070 Solanum pennellii HOM05D004280 ORTHO05D005059 2.6e-19 99.8 137 50.4
Cc00_g20490 Coffea canephora HOM05D004280 ORTHO05D005059 7.5e-19 98.2 63 81.0
AagrBONN_evm.TU.Sc2ySwM_362.2805 Anthoceros agrestis HOM05D004280 ORTHO05D005059 2.9e-18 96.3 119 46.2
Cre01.g011200 Chlamydomonas reinhardtii HOM05D004280 ORTHO05D005059 5.1e-15 85.5 154 35.1
PRCOL_00003189 Prasinoderma coloniale HOM05D004280 ORTHO05D005059 6.6e-15 85.1 168 34.5
EL10Ac4g09635 Beta vulgaris HOM05D004280 ORTHO05D005059 7.6e-11 71.6 75 56.0
Cfa024345 Carpinus fangiana HOM05D004280 ORTHO05D122617 2.9e-10 69.7 125 32.8
Thhalv10012232m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 3.2e-09 66.2 68 58.8
unitig_26.g9445 Utricularia gibba HOM05D004280 ORTHO05D005059 6.6e-07 58.5 99 46.5
Sopen04g030300 Solanum pennellii HOM05D004280 ORTHO05D005059 2.5e-06 56.6 41 73.2


User provided reference genes

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