Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18860 Striga asiatica HOM05D006461 ORTHO05D008199 5.9e-86 320.9 166 100.0
Migut.F00927 Erythranthe guttata HOM05D006461 ORTHO05D008199 7.6e-41 171.0 164 65.2
SalBow2G0694 Salvia bowleyana HOM05D006461 ORTHO05D008199 7.6e-41 171.0 166 63.9
MSTRG.8560 Avicennia marina HOM05D006461 ORTHO05D008199 2.2e-40 169.5 164 64.0
unitig_62.g23822 Utricularia gibba HOM05D006461 ORTHO05D008199 2.9e-40 169.1 106 82.1
Dinv19309 Davidia involucrata HOM05D006461 ORTHO05D008199 2.5e-36 156.0 100 80.0
Peaxi162Scf00516g00428 Petunia axillaris HOM05D006461 ORTHO05D008199 5.6e-36 154.8 164 57.3
PGSC0003DMG400026478 Solanum tuberosum HOM05D006461 ORTHO05D008199 5.6e-36 154.8 158 55.7
Nitab4.5_0000021g0870 Nicotiana tabacum HOM05D006461 ORTHO05D008199 7.4e-36 154.5 168 56.0
DCAR_020437 Daucus carota HOM05D006461 ORTHO05D008199 9.6e-36 154.1 161 55.9
Sopen03g028120 Solanum pennellii HOM05D006461 ORTHO05D008199 2.1e-35 152.9 158 55.1
CAN.G732.29 Capsicum annuum HOM05D006461 ORTHO05D008199 3.7e-35 152.1 166 57.8
MELO3C005387.2 Cucumis melo HOM05D006461 ORTHO05D008199 3.7e-35 152.1 103 78.6
CsaV3_5G005660 Cucumis sativus L. HOM05D006461 ORTHO05D008199 3.7e-35 152.1 103 78.6
ClCG01G005420 Citrullus lanatus HOM05D006461 ORTHO05D008199 6.2e-35 151.4 155 58.1
Nitab4.5_0005545g0020 Nicotiana tabacum HOM05D006461 ORTHO05D008199 6.2e-35 151.4 168 54.2
Sed0021956 Sechium edule HOM05D006461 ORTHO05D008199 1.1e-34 150.6 97 81.4
Atru.chr2.1733 Acer truncatum HOM05D006461 ORTHO05D008199 1.8e-34 149.8 100 78.0
Solyc03g097360.3 Solanum lycopersicum HOM05D006461 ORTHO05D008199 4.0e-34 148.7 158 55.7
Rhsim03G0225700 Rhododendron simsii HOM05D006461 ORTHO05D008199 6.9e-34 147.9 168 56.5
Aqoxy3G01574 Aquilegia oxysepala HOM05D006461 ORTHO05D008199 9.0e-34 147.5 102 74.5
Manes.08G158500 Manihot esculenta HOM05D006461 ORTHO05D008199 9.0e-34 147.5 97 79.4
Nn3g19117 Nelumbo nucifera HOM05D006461 ORTHO05D008199 2.0e-33 146.4 170 54.7
Actinidia08786 Actinidia chinensis HOM05D006461 ORTHO05D008199 2.6e-33 146.0 165 57.0
Lsat_1_v5_gn_9_48000 Lactuca sativa HOM05D006461 ORTHO05D008199 2.6e-33 146.0 159 57.2
TAR375G0815 Trochodendron aralioides HOM05D006461 ORTHO05D008199 2.6e-33 146.0 167 55.1
QL09p005902 Quercus lobata HOM05D006461 ORTHO05D008199 3.4e-33 145.6 174 52.9
Duzib106G1824 Durio zibethinus HOM05D006461 ORTHO05D008199 4.5e-33 145.2 102 76.5
arahy.Tifrunner.gnm1.ann1.8SK5FU Arachis hypogaea HOM05D006461 ORTHO05D008199 5.8e-33 144.8 97 79.4
arahy.Tifrunner.gnm1.ann1.W7YZT9 Arachis hypogaea HOM05D006461 ORTHO05D008199 5.8e-33 144.8 97 79.4
Glyma.02G000900 Glycine max HOM05D006461 ORTHO05D008199 5.8e-33 144.8 143 60.8
Prupe.1G398900 Prunus persica HOM05D006461 ORTHO05D008199 7.6e-33 144.4 171 52.6
Psat6g101920 Pisum sativum HOM05D006461 ORTHO05D008199 1.0e-32 144.1 168 55.4
Cfa016120 Carpinus fangiana HOM05D006461 ORTHO05D008199 2.2e-32 142.9 179 54.2
Lj6g0024347 Lotus japonicus HOM05D006461 ORTHO05D008199 2.2e-32 142.9 100 76.0
FvH4_4g10840 Fragaria vesca HOM05D006461 ORTHO05D008199 2.9e-32 142.5 100 75.0
Thecc.05G228900 Theobroma cacao HOM05D006461 ORTHO05D008199 2.9e-32 142.5 97 77.3
Hma1.2p1_0074F.1_g039100 Hydrangea macrophylla HOM05D006461 ORTHO05D008199 3.8e-32 142.1 159 56.0
Potri.013G074100 Populus trichocarpa HOM05D006461 ORTHO05D008199 3.8e-32 142.1 101 74.3
PSO063G2738 Papaver somniferum HOM05D006461 ORTHO05D008199 8.4e-32 141.0 168 53.6
Cc02_g00020 Coffea canephora HOM05D006461 ORTHO05D008199 1.1e-31 140.6 165 56.4
PGR119G0757 Punica granatum HOM05D006461 ORTHO05D008199 1.1e-31 140.6 86 83.7
FAN12G0004 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.4e-31 140.2 98 75.5
FAN17G2347 Fragaria x ananassa HOM05D006461 ORTHO05D008199 1.4e-31 140.2 98 75.5
VMungo0720G0947 Vigna mungo HOM05D006461 ORTHO05D008199 1.4e-31 140.2 97 77.3
Phvul.007G281100 Phaseolus vulgaris HOM05D006461 ORTHO05D008199 1.9e-31 139.8 98 76.5
Medtr1g040145 Medicago truncatula HOM05D006461 ORTHO05D008199 2.5e-31 139.4 169 55.0
Ca_26296_v3 Cicer arietinum L. HOM05D006461 ORTHO05D008199 3.2e-31 139.0 167 55.1
Gohir.D13G163800 Gossypium hirsutum HOM05D006461 ORTHO05D008199 3.2e-31 139.0 97 73.2
CiPaw.05G210400 Carya illinoinensis HOM05D006461 ORTHO05D008199 4.2e-31 138.7 170 56.5
SEGI_06006 Sequoiadendron giganteum HOM05D006461 ORTHO05D008199 4.2e-31 138.7 167 53.9
CANSAT54G2891 Cannabis sativa HOM05D006461 ORTHO05D008199 5.5e-31 138.3 87 79.3
Gorai.013G199400 Gossypium raimondii HOM05D006461 ORTHO05D008199 5.5e-31 138.3 97 73.2
RcHm_v2.0_Chr4g0406641 Rosa chinensis HOM05D006461 ORTHO05D008199 5.5e-31 138.3 171 53.2
Sp6g26660 Schrenkiella parvula HOM05D006461 ORTHO05D008199 7.1e-31 137.9 149 56.4
TPR.G30220 Trifolium pratense HOM05D006461 ORTHO05D008199 9.3e-31 137.5 144 60.4
GSVIVG01024255001 Vitis vinifera HOM05D006461 ORTHO05D008199 9.3e-31 137.5 75 90.7
C09p59590 Brassica napus HOM05D006461 ORTHO05D008199 1.2e-30 137.1 170 52.9
Ciclev10032825m.g Citrus clementina HOM05D006461 ORTHO05D008199 1.2e-30 137.1 181 49.7
Ah.08g222190 Amaranthus hybridus HOM05D006461 ORTHO05D008199 2.1e-30 136.3 100 72.0
BraA10t44244Z Brassica rapa HOM05D006461 ORTHO05D008199 2.1e-30 136.3 179 50.8
Manes.09G131300 Manihot esculenta HOM05D006461 ORTHO05D008199 2.7e-30 136.0 100 71.0
BcaC04g18779 Brassica carinata HOM05D006461 ORTHO05D008199 3.5e-30 135.6 177 50.8
A10p21840 Brassica napus HOM05D006461 ORTHO05D008199 3.5e-30 135.6 115 65.2
ECA232G1267 Erigeron canadensis HOM05D006461 ORTHO05D008199 3.5e-30 135.6 162 53.7
Gohir.A13G158700 Gossypium hirsutum HOM05D006461 ORTHO05D008199 3.5e-30 135.6 99 72.7
BcaB08g36762 Brassica carinata HOM05D006461 ORTHO05D008199 6.0e-30 134.8 174 51.1
BolC9t58798H Brassica oleracea HOM05D006461 ORTHO05D008199 7.9e-30 134.4 170 52.4
HanXRQChr05g0140271 Helianthus annuus HOM05D006461 ORTHO05D008199 1.0e-29 134.0 104 70.2
Hund20961 Selenicereus undatus HOM05D006461 ORTHO05D008199 1.8e-29 133.3 85 77.6
CARHR195620 Cardamine hirsuta HOM05D006461 ORTHO05D008199 2.3e-29 132.9 101 71.3
EL10Ac7g16271 Beta vulgaris HOM05D006461 ORTHO05D008199 3.0e-29 132.5 150 56.0
AL6G28650 Arabidopsis lyrata HOM05D006461 ORTHO05D008199 3.9e-29 132.1 101 70.3
CDE12G0687 Ceratophyllum demersum HOM05D006461 ORTHO05D008199 3.9e-29 132.1 97 72.2
Cc11_g04930 Coffea canephora HOM05D006461 ORTHO05D008199 3.9e-29 132.1 100 70.0
MD08G1049500 Malus domestica HOM05D006461 ORTHO05D008199 3.9e-29 132.1 171 49.7
MD15G1045100 Malus domestica HOM05D006461 ORTHO05D008199 3.9e-29 132.1 168 51.2
AUR62001576 Chenopodium quinoa HOM05D006461 ORTHO05D008199 5.1e-29 131.7 119 63.9
Thhalv10014786m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 5.1e-29 131.7 101 70.3
BcaB01g05208 Brassica carinata HOM05D006461 ORTHO05D008199 8.7e-29 131.0 98 71.4
A03p08420 Brassica napus HOM05D006461 ORTHO05D008199 8.7e-29 131.0 98 71.4
C03p09820 Brassica napus HOM05D006461 ORTHO05D008199 8.7e-29 131.0 98 71.4
BolC3t13470H Brassica oleracea HOM05D006461 ORTHO05D008199 8.7e-29 131.0 98 71.4
BraA03t10165Z Brassica rapa HOM05D006461 ORTHO05D008199 8.7e-29 131.0 98 71.4
THA.LOC104802902 Tarenaya hassleriana HOM05D006461 ORTHO05D008199 1.1e-28 130.6 101 69.3
BcaB01g04940 Brassica carinata HOM05D006461 ORTHO05D008199 1.5e-28 130.2 86 79.1
CiPaw.06G037900 Carya illinoinensis HOM05D006461 ORTHO05D008199 1.5e-28 130.2 183 51.4
Mapoly0098s0024 Marchantia polymorpha HOM05D006461 ORTHO05D008199 1.5e-28 130.2 104 68.3
Sc03g0004610 Simmondsia chinensis HOM05D006461 ORTHO05D008199 1.5e-28 130.2 96 71.9
AUR62020207 Chenopodium quinoa HOM05D006461 ORTHO05D008199 2.5e-28 129.4 119 63.0
Carub.0006s1580 Capsella rubella HOM05D006461 ORTHO05D008199 5.7e-28 128.3 101 69.3
Aa31LG11G12100 Aethionema arabicum HOM05D006461 ORTHO05D008199 7.4e-28 127.9 128 57.8
Lj7P538T25 Lonicera japonica HOM05D006461 ORTHO05D008199 7.4e-28 127.9 75 84.0
Sabra13G0064300 Salix brachista HOM05D006461 ORTHO05D008199 1.3e-27 127.1 98 70.4
TWI32G0808 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 1.3e-27 127.1 100 68.0
Hund18806 Selenicereus undatus HOM05D006461 ORTHO05D008199 2.8e-27 125.9 85 75.3
Pp3c1_12810 Physcomitrium patens HOM05D006461 ORTHO05D008199 8.2e-27 124.4 105 61.9
Actinidia24631 Actinidia chinensis HOM05D006461 ORTHO05D008199 1.4e-26 123.6 91 69.2
HPP92_003741 Vanilla planifolia HOM05D001207 ORTHO05D007056 3.1e-26 122.5 73 83.6
Os06g0484600 Oryza sativa ssp. japonica HOM05D006461 ORTHO05D008199 6.9e-26 121.3 97 62.9
Haze_00341 Corylus avellana HOM05D006461 ORTHO05D000508 4.5e-25 118.6 147 51.7
SMO358G0572 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 4.5e-25 118.6 121 57.0
TWI60G1716 Tripterygium wilfordii HOM05D006461 ORTHO05D008199 7.6e-25 117.9 100 66.0
Zm00001eb278180 Zea mays HOM05D006461 ORTHO05D008199 1.7e-24 116.7 166 46.4
AagrBONN_evm.TU.Sc2ySwM_117.1385 Anthoceros agrestis HOM05D006461 ORTHO05D008199 6.5e-24 114.8 100 58.0
Cre09.g394701 Chlamydomonas reinhardtii HOM05D006461 ORTHO05D008199 2.2e-19 99.8 78 62.8
PRCOL_00004611 Prasinoderma coloniale HOM05D006461 ORTHO05D008199 2.2e-19 99.8 108 50.9
Sed0001670 Sechium edule HOM05D006461 ORTHO05D008199 9.0e-18 94.4 97 58.8
MCO16G354 Micromonas commoda HOM05D006461 ORTHO05D008199 2.0e-17 93.2 100 53.0
SMO358G0215 Selaginella moellendorffii HOM05D006461 ORTHO05D008199 7.7e-17 91.3 84 47.6
CSS0025765 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.1e-15 87.4 154 39.6
CSS0040075 Camellia sinensis var. sinensis HOM05D006461 ORTHO05D008199 1.1e-15 87.4 154 39.6
Eucgr.A02995 Eucalyptus grandis HOM05D006461 ORTHO05D008199 2.1e-14 83.2 46 87.0
Lalb_Chr19g0127781 Lupinus albus HOM05D006461 ORTHO05D008199 2.7e-14 82.8 46 89.1
SHI39095 Sapria himalayana HOM05D006461 ORTHO05D008199 8.8e-13 77.8 83 53.0
Actinidia28897 Actinidia chinensis HOM05D006461 ORTHO05D008199 9.7e-12 74.3 117 44.4
Cpa.g.sc2589.1 Carica papaya HOM05D006461 ORTHO05D008199 2.7e-06 56.2 54 59.3
MELO3C002161.2 Cucumis melo HOM05D002854 ORTHO05D003051 2.7e-06 56.2 75 42.7
Thhalv10002241m.g Eutrema salsugineum HOM05D006461 ORTHO05D008199 2.7e-06 56.2 62 56.5
Sc16g0010190 Simmondsia chinensis HOM05D002854 ORTHO05D003051 2.7e-06 56.2 86 39.5
ClCG01G014880 Citrullus lanatus HOM05D002854 ORTHO05D003051 4.7e-06 55.5 67 44.8
CsaV3_1G007440 Cucumis sativus L. HOM05D002854 ORTHO05D003051 4.7e-06 55.5 67 44.8
Migut.D02063 Erythranthe guttata HOM05D002854 ORTHO05D003051 4.7e-06 55.5 99 34.3
Sed0019664 Sechium edule HOM05D002854 ORTHO05D003051 4.7e-06 55.5 75 40.0


User provided reference genes

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