Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 4.9e-301 1036.9 504 100.0
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.2e-185 653.7 476 68.9
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 4.5e-177 625.2 462 68.0
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 7.7e-161 571.2 482 61.8
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.1e-156 557.4 459 60.6
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 4.4e-156 555.4 465 59.1
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 5.7e-156 555.1 468 58.3
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 9.7e-156 554.3 465 58.9
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 1.2e-153 547.4 470 58.7
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.0e-148 530.0 457 58.2
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 2.8e-147 526.2 465 56.3
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 3.7e-147 525.8 490 55.1
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 4.5e-145 518.8 461 56.6
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 7.7e-145 518.1 463 56.6
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 8.5e-144 514.6 466 55.8
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 4.2e-143 512.3 462 56.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 2.1e-142 510.0 462 55.6
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 2.7e-142 509.6 465 54.6
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 3.6e-142 509.2 462 55.0
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 1.8e-141 506.9 467 54.4
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 3.0e-141 506.1 478 54.6
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 5.2e-141 505.4 460 55.0
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 5.2e-141 505.4 459 55.8
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 8.8e-141 504.6 453 55.8
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 8.8e-141 504.6 458 55.7
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 3.3e-140 502.7 457 55.4
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 3.3e-140 502.7 458 53.9
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.4e-140 502.3 459 55.6
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 4.4e-140 502.3 442 55.2
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 5.7e-140 501.9 460 55.0
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 7.5e-140 501.5 493 52.9
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 1.7e-139 500.4 442 54.1
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 4.8e-139 498.8 453 55.2
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.1e-138 497.7 466 54.9
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.4e-138 496.5 456 55.7
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.4e-138 496.5 467 54.2
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 3.1e-138 496.1 445 55.3
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 4.1e-138 495.7 460 53.9
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 5.3e-138 495.4 448 55.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 7.0e-138 495.0 465 54.6
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 3.5e-137 492.7 460 54.3
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.3e-136 490.7 457 54.0
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 1.7e-136 490.3 464 54.3
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 2.2e-136 490.0 469 52.9
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 2.9e-136 489.6 460 53.9
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 5.0e-136 488.8 458 53.7
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 8.5e-136 488.0 460 53.7
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 1.5e-135 487.3 456 54.2
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.9e-135 486.9 458 53.5
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.2e-135 486.1 469 52.5
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 3.2e-135 486.1 447 52.8
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 9.4e-135 484.6 460 53.9
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 9.4e-135 484.6 461 52.3
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 8.0e-134 481.5 463 52.3
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 3.0e-133 479.6 460 53.0
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 5.2e-133 478.8 472 50.8
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 6.8e-133 478.4 448 53.8
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 8.8e-133 478.0 466 53.0
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 7.5e-132 474.9 455 53.2
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 9.8e-132 474.6 470 51.3
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 2.2e-131 473.4 482 50.6
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 4.8e-131 472.2 486 51.4
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 8.3e-131 471.5 415 56.9
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 1.4e-130 470.7 458 52.0
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 7.0e-130 468.4 463 51.6
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 4.5e-129 465.7 513 50.1
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 1.3e-128 464.2 467 50.3
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 2.9e-128 463.0 429 53.1
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 3.8e-128 462.6 468 50.0
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 1.5e-127 460.7 421 53.7
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.6e-126 457.2 454 53.7
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 2.1e-126 456.8 457 51.2
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 2.6e-124 449.9 411 55.0
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 9.8e-124 448.0 464 51.1
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 5.4e-122 442.2 407 55.5
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.5e-121 439.5 467 49.3
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 1.5e-116 424.1 444 50.5
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 2.6e-116 423.3 440 49.8
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.3e-115 421.0 405 50.6
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 8.3e-115 418.3 473 48.8
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 5.0e-112 409.1 513 43.9
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 8.0e-110 401.7 261 79.7
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 4.0e-109 399.4 410 49.5
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.2e-108 397.9 476 48.1
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.1e-103 381.3 348 56.0
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 5.6e-103 379.0 401 50.1
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 4.4e-100 369.4 419 47.5
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.9e-96 356.3 468 44.0
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 3.3e-95 353.2 396 47.0
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.2e-94 351.3 367 49.6
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 5.8e-92 342.4 304 57.6
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 5.6e-79 299.3 301 52.5
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 3.6e-78 296.6 301 53.2
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 4.8e-78 296.2 270 54.8
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 1.7e-75 287.7 474 38.0
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 2.1e-73 280.8 450 36.4
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 7.9e-73 278.9 450 37.1
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 4.3e-71 273.1 415 37.3
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 7.6e-68 262.3 465 35.5
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.8e-67 260.0 444 35.1
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 2.1e-65 254.2 278 50.7
TPR.G21535 Trifolium pratense HOM05D006805 ORTHO05D008656 7.4e-63 245.7 173 65.9
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 6.2e-62 242.7 449 35.9
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 5.7e-55 219.5 207 54.6
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 6.5e-51 206.1 221 47.1
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 8.5e-51 205.7 261 42.1
AL6G38800 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 4.2e-50 203.4 164 60.4
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 6.5e-43 179.5 340 34.7
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.6e-41 174.9 187 48.7
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 3.3e-39 167.2 136 62.5
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.3e-38 165.2 122 60.7
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 1.7e-38 164.9 131 59.5
Lj2g0002148 Lotus japonicus HOM05D006805 ORTHO05D008656 4.1e-37 160.2 111 66.7
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 3.1e-29 134.0 104 58.7
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 2.5e-26 124.4 94 60.6
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 3.3e-23 114.0 103 54.4
Os01g0262700 Oryza sativa ssp. japonica HOM05D006805 ORTHO05D008656 7.5e-23 112.8 126 44.4
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 2.6e-15 87.8 78 55.1
Pp3c26_9360 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.2e-10 70.5 95 38.9


User provided reference genes

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