Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18748 Striga asiatica HOM05D006515 ORTHO05D008125 6.8e-114 414.1 219 100.0
Migut.H02429 Erythranthe guttata HOM05D006515 ORTHO05D008125 4.3e-76 288.5 321 55.5
Oeu028372.3 Olea europaea HOM05D006515 ORTHO05D008125 9.9e-73 277.3 327 52.9
MSTRG.2534 Avicennia marina HOM05D006515 ORTHO05D008125 3.5e-70 268.9 328 53.0
TWI74G0473 Tripterygium wilfordii HOM05D006515 ORTHO05D008125 5.1e-69 265.0 294 53.4
Potri.005G084400 Populus trichocarpa HOM05D006515 ORTHO05D008125 8.7e-69 264.2 288 53.8
Rhsim08G0006500 Rhododendron simsii HOM05D006515 ORTHO05D008125 1.1e-68 263.8 288 53.5
GSVIVG01022225001 Vitis vinifera HOM05D006515 ORTHO05D008125 1.9e-68 263.1 288 53.8
Cfa002752 Carpinus fangiana HOM05D006515 ORTHO05D008125 5.6e-68 261.5 288 53.8
CANSAT01G1885 Cannabis sativa HOM05D006515 ORTHO05D008125 1.3e-67 260.4 317 50.5
VMungo0251G1698 Vigna mungo HOM05D006515 ORTHO05D008125 1.6e-67 260.0 288 53.5
Ca_17696_v3 Cicer arietinum L. HOM05D006515 ORTHO05D008125 2.1e-67 259.6 290 52.4
Cc07_g16230 Coffea canephora HOM05D006515 ORTHO05D008125 2.8e-67 259.2 296 51.7
Manes.12G142600 Manihot esculenta HOM05D006515 ORTHO05D008125 2.8e-67 259.2 288 53.1
Duzib264G0250 Durio zibethinus HOM05D006515 ORTHO05D008125 3.7e-67 258.8 331 49.8
ECA238G1556 Erigeron canadensis HOM05D006515 ORTHO05D008125 3.7e-67 258.8 291 52.2
Glyma.08G141400 Glycine max HOM05D006515 ORTHO05D008125 4.8e-67 258.5 288 53.1
TAR628G1388 Trochodendron aralioides HOM05D006515 ORTHO05D008125 4.8e-67 258.5 327 51.1
Lj4g0022266 Lotus japonicus HOM05D006515 ORTHO05D008125 6.2e-67 258.1 286 52.4
Phvul.002G264700 Phaseolus vulgaris HOM05D006515 ORTHO05D008125 1.1e-66 257.3 288 53.1
Haze_25038 Corylus avellana HOM05D006515 ORTHO05D008125 1.4e-66 256.9 288 52.8
Thecc.01G112600 Theobroma cacao HOM05D006515 ORTHO05D008125 2.4e-66 256.1 289 52.6
TPR.G2156 Trifolium pratense HOM05D006515 ORTHO05D008125 2.4e-66 256.1 294 50.7
arahy.Tifrunner.gnm1.ann1.L5WCB3 Arachis hypogaea HOM05D006515 ORTHO05D008125 3.1e-66 255.8 288 52.1
MBI02_g20709_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 3.1e-66 255.8 288 52.8
MBI02_g45733_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 3.1e-66 255.8 288 52.8
Eucgr.I00323 Eucalyptus grandis HOM05D006515 ORTHO05D008125 4.0e-66 255.4 289 52.2
FvH4_1g22260 Fragaria vesca HOM05D006515 ORTHO05D008125 5.3e-66 255.0 289 50.5
Lj4A877G29 Lonicera japonica HOM05D006515 ORTHO05D008125 5.3e-66 255.0 282 53.9
Nn5g28914 Nelumbo nucifera HOM05D006515 ORTHO05D008125 5.3e-66 255.0 325 49.5
CiPaw.04G091900 Carya illinoinensis HOM05D006515 ORTHO05D008125 6.9e-66 254.6 332 48.5
Lalb_Chr12g0203541 Lupinus albus HOM05D006515 ORTHO05D008125 6.9e-66 254.6 288 52.4
Psat7g051400 Pisum sativum HOM05D006515 ORTHO05D008125 6.9e-66 254.6 290 51.0
CSS0008392 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 9.0e-66 254.2 293 52.6
RcHm_v2.0_Chr2g0116401 Rosa chinensis HOM05D006515 ORTHO05D008125 1.2e-65 253.8 289 51.2
QL06p032194 Quercus lobata HOM05D006515 ORTHO05D008125 2.0e-65 253.1 300 50.3
Gohir.D03G046000 Gossypium hirsutum HOM05D006515 ORTHO05D008125 3.4e-65 252.3 330 48.8
Gorai.003G047200 Gossypium raimondii HOM05D006515 ORTHO05D008125 3.4e-65 252.3 330 48.8
THA.LOC104807722 Tarenaya hassleriana HOM05D006515 ORTHO05D008125 4.5e-65 251.9 289 51.2
Zm00001eb069020 Zea mays HOM05D006515 ORTHO05D008125 4.5e-65 251.9 291 51.5
Peaxi162Scf00133g01415 Petunia axillaris HOM05D006515 ORTHO05D008125 5.8e-65 251.5 326 48.8
Atru.chr4.394 Acer truncatum HOM05D006515 ORTHO05D008125 7.6e-65 251.1 286 51.7
EL10Ac6g14754 Beta vulgaris HOM05D006515 ORTHO05D008125 1.7e-64 250.0 320 48.1
FAN19G0752 Fragaria x ananassa HOM05D006515 ORTHO05D008125 2.2e-64 249.6 294 50.0
CSS0014645 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 2.9e-64 249.2 287 52.3
COL.COLO4_11014 Corchorus olitorius HOM05D006515 ORTHO05D008125 2.9e-64 249.2 296 50.0
Nitab4.5_0000431g0160 Nicotiana tabacum HOM05D006515 ORTHO05D008125 3.8e-64 248.8 336 48.5
Sabra05G0069400 Salix brachista HOM05D006515 ORTHO05D008125 4.9e-64 248.4 308 49.0
MELO3C020948.2 Cucumis melo HOM05D006515 ORTHO05D008125 6.5e-64 248.1 288 50.7
CsaV3_2G017540 Cucumis sativus L. HOM05D006515 ORTHO05D008125 6.5e-64 248.1 288 50.7
SalBow6G3287 Salvia bowleyana HOM05D006515 ORTHO05D008125 1.1e-63 247.3 271 54.2
Ah.02g125970 Amaranthus hybridus HOM05D006515 ORTHO05D008125 1.9e-63 246.5 252 54.8
HanXRQChr15g0484391 Helianthus annuus HOM05D006515 ORTHO05D008125 1.9e-63 246.5 324 48.8
MD15G1333200 Malus domestica HOM05D006515 ORTHO05D008125 1.9e-63 246.5 298 49.0
Ciclev10026110m.g Citrus clementina HOM05D006515 ORTHO05D008125 2.5e-63 246.1 290 51.7
CAN.G1056.2 Capsicum annuum HOM05D006515 ORTHO05D008125 7.1e-63 244.6 282 51.1
ATR0564G276 Amborella trichopoda HOM05D000080 ORTHO05D008125 9.3e-63 244.2 306 49.7
BraA04t17291Z Brassica rapa HOM05D006515 ORTHO05D008125 9.3e-63 244.2 327 45.6
BcaB06g27799 Brassica carinata HOM05D006515 ORTHO05D008125 1.2e-62 243.8 298 48.3
BolC4t26701H Brassica oleracea HOM05D006515 ORTHO05D008125 1.6e-62 243.4 327 45.3
Sopen04g006040 Solanum pennellii HOM05D006515 ORTHO05D008125 2.7e-62 242.7 327 47.7
unitig_899.g15001 Utricularia gibba HOM05D006515 ORTHO05D008125 3.5e-62 242.3 290 49.7
A04p16560 Brassica napus HOM05D006515 ORTHO05D008125 4.6e-62 241.9 327 45.3
PGSC0003DMG400023598 Solanum tuberosum HOM05D006515 ORTHO05D008125 4.6e-62 241.9 327 47.4
AUR62016278 Chenopodium quinoa HOM05D006515 ORTHO05D008125 7.9e-62 241.1 291 49.1
BcaC02g08749 Brassica carinata HOM05D006515 ORTHO05D008125 1.3e-61 240.4 327 45.0
Solyc04g011900.4 Solanum lycopersicum HOM05D006515 ORTHO05D008125 1.3e-61 240.4 293 49.8
Aqoxy6G00481 Aquilegia oxysepala HOM05D006515 ORTHO05D008125 1.8e-61 240.0 319 46.7
AL4G11280 Arabidopsis lyrata HOM05D006515 ORTHO05D008125 3.0e-61 239.2 291 48.5
AT2G21960 Arabidopsis thaliana HOM05D006515 ORTHO05D008125 3.0e-61 239.2 303 47.5
Carub.0004s0110 Capsella rubella HOM05D006515 ORTHO05D008125 3.0e-61 239.2 291 48.5
Sp4g01040 Schrenkiella parvula HOM05D006515 ORTHO05D008125 3.9e-61 238.8 291 48.8
C04p51080 Brassica napus HOM05D006515 ORTHO05D008125 1.1e-60 237.3 311 46.9
FAN28G2568 Fragaria x ananassa HOM05D006515 ORTHO05D008125 1.5e-60 236.9 323 45.2
Thhalv10000230m.g Eutrema salsugineum HOM05D006515 ORTHO05D008125 1.9e-60 236.5 291 47.8
Nitab4.5_0013619g0010 Nicotiana tabacum HOM05D005315 ORTHO05D008125 4.3e-60 235.3 283 50.2
CARHR113040 Cardamine hirsuta HOM05D006515 ORTHO05D008125 7.4e-60 234.6 287 48.1
Aa31LG7G14680 Aethionema arabicum HOM05D006515 ORTHO05D008125 6.3e-59 231.5 305 46.2
Cpa.g.sc196.13 Carica papaya HOM05D006515 ORTHO05D008125 6.3e-59 231.5 272 49.6
PSO675G2678 Papaver somniferum HOM05D006515 ORTHO05D008125 8.2e-59 231.1 295 46.8
Rhsim08G0007200 Rhododendron simsii HOM05D006515 ORTHO05D008125 1.4e-58 230.3 354 42.9
PSO541G0558 Papaver somniferum HOM05D006515 ORTHO05D008125 1.8e-58 229.9 295 46.8
Hund19656 Selenicereus undatus HOM05D006515 ORTHO05D008125 1.2e-57 227.3 314 45.5
HPP92_004318 Vanilla planifolia HOM05D006515 ORTHO05D008125 1.2e-57 227.3 308 44.5
TPR.G34384 Trifolium pratense HOM05D006515 ORTHO05D008125 3.2e-55 219.2 131 82.4
DCAR_010076 Daucus carota HOM05D006515 ORTHO05D008125 4.2e-55 218.8 274 48.9
AUR62003307 Chenopodium quinoa HOM05D006515 ORTHO05D008125 7.2e-55 218.0 269 49.1
Sed0016096 Sechium edule HOM05D006515 ORTHO05D008125 1.8e-53 213.4 125 85.6
PGR004G2121 Punica granatum HOM05D006515 ORTHO05D008125 1.1e-52 210.7 125 84.8
Sc07g0001530 Simmondsia chinensis HOM05D006515 ORTHO05D008125 9.1e-50 201.1 128 78.9
arahy.Tifrunner.gnm1.ann1.M7EXEZ Arachis hypogaea HOM05D006515 ORTHO05D008125 5.9e-49 198.4 288 44.1
Lsat_1_v5_gn_1_15020 Lactuca sativa HOM05D006515 ORTHO05D008125 5.9e-49 198.4 291 44.3
FAN23G2782 Fragaria x ananassa HOM05D006515 ORTHO05D008125 2.9e-48 196.1 277 45.1
Mapoly0125s0032 Marchantia polymorpha HOM05D006515 ORTHO05D008125 2.9e-48 196.1 293 42.3
Actinidia28893 Actinidia chinensis HOM05D006515 ORTHO05D008125 3.8e-48 195.7 311 44.7
SMO356G0225 Selaginella moellendorffii HOM05D006515 ORTHO05D008125 5.5e-47 191.8 268 42.9
AagrBONN_evm.TU.Sc2ySwM_344.4911 Anthoceros agrestis HOM05D006515 ORTHO05D008125 2.7e-46 189.5 288 41.7
CSS0013135 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 4.6e-46 188.7 237 49.8
Dinv19488 Davidia involucrata HOM05D006515 ORTHO05D008125 3.0e-45 186.0 237 49.4
ClCG02G013380 Citrullus lanatus HOM05D006515 ORTHO05D008125 7.4e-44 181.4 312 40.1
Prupe.6G173100 Prunus persica HOM05D006515 ORTHO05D008125 1.2e-41 174.1 237 45.6
vmacro18633 Vaccinium macrocarpon HOM05D006515 ORTHO05D008125 1.2e-41 174.1 129 74.4
Pp3c15_14640 Physcomitrium patens HOM05D006515 ORTHO05D008125 1.1e-39 167.5 290 39.0
Duzib264G0715 Durio zibethinus HOM05D006515 ORTHO05D008125 3.0e-37 159.5 241 43.6
Gohir.A02G135100 Gossypium hirsutum HOM05D006515 ORTHO05D008125 7.4e-36 154.8 237 44.3
CDE04G2056 Ceratophyllum demersum HOM05D006515 ORTHO05D008125 9.1e-34 147.9 99 74.7
CSS0007670 Camellia sinensis var. sinensis HOM05D006515 ORTHO05D008125 1.3e-32 144.1 74 97.3
SEGI_30317 Sequoiadendron giganteum HOM05D006515 ORTHO05D008125 3.6e-30 136.0 81 79.0
Cre08.g379200 Chlamydomonas reinhardtii HOM05D006515 ORTHO05D008125 1.2e-25 120.9 269 32.7
FAN26G2558 Fragaria x ananassa HOM05D006515 ORTHO05D008125 1.6e-25 120.6 79 72.2
PRCOL_00002642 Prasinoderma coloniale HOM05D006515 ORTHO05D008125 2.2e-19 100.1 120 47.5
Glyma.05G183600 Glycine max HOM05D006515 ORTHO05D008125 5.4e-18 95.5 189 37.0
vmacro18632 Vaccinium macrocarpon HOM05D006515 ORTHO05D008125 2.7e-17 93.2 54 81.5
MCO16G115 Micromonas commoda HOM05D006515 ORTHO05D008125 3.8e-16 89.4 283 26.1
Os04g0639300 Oryza sativa ssp. japonica HOM05D006515 ORTHO05D008125 3.8e-16 89.4 57 78.9
HPP92_004304 Vanilla planifolia HOM05D006515 ORTHO05D008125 1.1e-15 87.8 121 44.6
CDE04G2335 Ceratophyllum demersum HOM05D006515 ORTHO05D008125 2.3e-13 80.1 189 31.2
Os09g0436500 Oryza sativa ssp. japonica HOM05D006515 ORTHO05D008125 2.3e-13 80.1 50 72.0
MBI06_g27505_MAGBIO Magnolia biondii HOM05D006515 ORTHO05D008125 5.0e-08 62.4 71 49.3
SEGI_33484 Sequoiadendron giganteum HOM05D006515 ORTHO05D008125 8.6e-08 61.6 37 78.4
Cre08.g379175 Chlamydomonas reinhardtii HOM05D006515 ORTHO05D008125 5.6e-07 58.9 55 52.7


User provided reference genes

Program Settings