Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 6.9e-99 364.0 186 100.0
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 7.4e-69 264.2 185 72.4
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 1.7e-65 253.1 185 68.6
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 2.5e-61 239.2 181 68.5
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 6.1e-55 218.0 193 59.1
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 1.8e-54 216.5 187 60.4
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 3.0e-54 215.7 200 57.5
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 3.9e-54 215.3 186 60.8
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 8.8e-54 214.2 185 56.8
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 5.7e-53 211.5 184 59.8
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 5.7e-53 211.5 157 66.9
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.8e-52 209.1 185 58.9
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 2.8e-52 209.1 203 56.2
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 3.7e-52 208.8 150 67.3
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 6.3e-52 208.0 149 67.1
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 8.2e-52 207.6 188 56.9
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.4e-51 206.8 190 55.8
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 3.1e-51 205.7 195 56.9
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 3.1e-51 205.7 187 58.3
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 4.1e-51 205.3 187 57.2
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 7.0e-51 204.5 196 57.1
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 9.1e-51 204.1 194 57.2
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 9.1e-51 204.1 195 57.9
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 1.2e-50 203.8 187 56.1
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 1.2e-50 203.8 188 56.4
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 4.5e-50 201.8 203 52.7
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 4.5e-50 201.8 203 55.7
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 5.9e-50 201.4 142 67.6
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 5.9e-50 201.4 195 57.4
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 7.7e-50 201.1 194 55.7
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 7.7e-50 201.1 202 55.0
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 7.7e-50 201.1 195 56.9
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 1.0e-49 200.7 150 67.3
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 1.3e-49 200.3 194 55.2
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 1.3e-49 200.3 187 57.8
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 2.2e-49 199.5 184 56.0
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 2.2e-49 199.5 183 56.3
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 2.9e-49 199.1 194 55.7
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 3.8e-49 198.7 190 53.7
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 5.0e-49 198.4 190 56.8
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 5.0e-49 198.4 174 60.3
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 5.0e-49 198.4 175 60.6
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 5.0e-49 198.4 175 60.6
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.4e-48 196.8 192 54.7
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 2.5e-48 196.1 162 61.7
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.5e-48 196.1 190 54.7
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 3.2e-48 195.7 194 54.6
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 3.2e-48 195.7 187 55.1
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 4.2e-48 195.3 202 53.0
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 5.5e-48 194.9 202 53.0
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 7.2e-48 194.5 190 54.7
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 9.4e-48 194.1 183 55.7
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 1.2e-47 193.7 194 54.6
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 2.7e-47 192.6 170 56.5
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 3.6e-47 192.2 149 61.7
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 3.6e-47 192.2 149 61.7
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 4.7e-47 191.8 195 53.8
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 4.7e-47 191.8 196 52.0
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 6.1e-47 191.4 186 54.8
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 6.1e-47 191.4 186 55.4
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.0e-46 190.7 190 53.7
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 2.3e-46 189.5 150 64.7
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 3.9e-46 188.7 161 60.9
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 3.9e-46 188.7 161 59.6
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 5.2e-46 188.3 183 55.2
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 5.2e-46 188.3 201 55.2
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 6.7e-46 188.0 199 50.3
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 1.1e-45 187.2 203 53.7
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 1.1e-45 187.2 169 59.8
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 1.1e-45 187.2 169 59.8
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 1.1e-45 187.2 169 59.8
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 1.1e-45 187.2 169 59.8
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 2.0e-45 186.4 170 60.0
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 2.6e-45 186.0 179 54.2
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 3.3e-45 185.7 196 52.6
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 7.4e-45 184.5 178 57.9
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 7.4e-45 184.5 198 53.0
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 9.7e-45 184.1 169 59.2
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 9.7e-45 184.1 180 55.0
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 1.7e-44 183.3 180 55.0
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 2.2e-44 183.0 152 62.5
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 2.8e-44 182.6 175 57.1
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 2.8e-44 182.6 158 58.9
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 4.8e-44 181.8 155 58.1
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 6.3e-44 181.4 158 58.2
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 1.1e-43 180.6 189 55.6
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 1.8e-43 179.9 169 49.7
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.8e-43 179.9 151 59.6
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 2.4e-43 179.5 191 53.9
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.5e-42 175.6 188 50.5
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 3.5e-42 175.6 160 55.0
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 4.5e-42 175.3 197 49.2
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 5.9e-42 174.9 197 47.2
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 7.7e-42 174.5 191 47.6
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 3.8e-41 172.2 188 50.0
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 3.8e-41 172.2 150 56.0
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 6.5e-41 171.4 180 52.2
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 4.2e-40 168.7 193 45.1
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 7.2e-40 167.9 138 58.7
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 6.1e-39 164.9 193 45.1
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 5.9e-34 148.3 145 51.0
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 4.7e-31 138.7 141 48.2
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.9e-24 116.7 89 62.9
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 2.5e-24 116.3 153 46.4
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 1.6e-23 113.6 125 45.6
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 6.8e-22 108.2 153 39.2
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 3.5e-18 95.9 160 36.2
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 2.3e-17 93.2 141 33.3
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 3.3e-16 89.4 136 37.5
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 1.4e-14 84.0 96 42.7
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 8.9e-14 81.3 139 29.5
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 1.2e-13 80.9 136 35.3
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 2.6e-13 79.7 63 60.3
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 3.7e-12 75.9 148 31.8
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 2.4e-11 73.2 114 45.6
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 1.6e-10 70.5 71 54.9


User provided reference genes

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