Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 4.4e-58 227.6 107 100.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 7.1e-40 167.2 104 69.2
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 7.8e-39 163.7 98 71.4
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 9.6e-37 156.8 101 66.3
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 4.4e-34 147.9 107 60.7
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 6.2e-28 127.5 96 58.3
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 2.4e-27 125.6 99 52.5
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 9.0e-27 123.6 111 55.0
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 1.2e-26 123.2 96 53.1
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 2.6e-26 122.1 96 51.0
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 5.8e-26 120.9 96 50.0
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.7e-25 119.4 108 50.0
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 3.8e-25 118.2 103 51.5
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 1.4e-24 116.3 92 55.4
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 1.4e-24 116.3 105 49.5
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 1.4e-24 116.3 111 53.2
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.9e-24 115.9 99 53.5
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 2.4e-24 115.5 101 49.5
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 3.2e-24 115.2 104 51.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 5.4e-24 114.4 104 51.0
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 5.4e-24 114.4 104 51.0
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 7.1e-24 114.0 99 50.5
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 7.1e-24 114.0 95 52.6
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 7.1e-24 114.0 102 52.0
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 7.1e-24 114.0 101 51.5
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 9.3e-24 113.6 104 50.0
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 9.3e-24 113.6 101 48.5
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 1.6e-23 112.8 78 56.4
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.6e-23 112.8 104 50.0
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 1.6e-23 112.8 95 48.4
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 3.5e-23 111.7 99 49.5
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 3.5e-23 111.7 99 48.5
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 4.6e-23 111.3 101 47.5
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 4.6e-23 111.3 70 64.3
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 7.9e-23 110.5 97 52.6
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 1.0e-22 110.2 109 46.8
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 1.0e-22 110.2 109 46.8
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 1.0e-22 110.2 89 53.9
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 1.0e-22 110.2 99 49.5
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.3e-22 109.8 99 50.5
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 1.3e-22 109.8 64 65.6
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 1.3e-22 109.8 64 65.6
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.3e-22 109.8 89 57.3
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 1.3e-22 109.8 101 48.5
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.3e-22 109.8 101 48.5
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.8e-22 109.4 101 48.5
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 1.8e-22 109.4 101 48.5
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 2.3e-22 109.0 96 50.0
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 2.3e-22 109.0 96 50.0
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 2.3e-22 109.0 89 49.4
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 2.3e-22 109.0 94 47.9
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 3.0e-22 108.6 64 64.1
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 3.0e-22 108.6 88 54.5
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.9e-22 108.2 92 52.2
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 3.9e-22 108.2 99 49.5
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 3.9e-22 108.2 101 47.5
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 6.7e-22 107.5 93 51.6
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 8.7e-22 107.1 95 48.4
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 8.7e-22 107.1 93 48.4
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 8.7e-22 107.1 93 51.6
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.1e-21 106.7 84 54.8
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 1.1e-21 106.7 101 46.5
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 1.1e-21 106.7 105 47.6
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 1.1e-21 106.7 91 51.6
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 1.9e-21 105.9 92 53.3
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 1.9e-21 105.9 112 46.4
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 2.5e-21 105.5 68 60.3
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 2.5e-21 105.5 102 49.0
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 3.3e-21 105.1 93 47.3
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.3e-21 105.1 62 62.9
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 3.3e-21 105.1 95 49.5
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 3.3e-21 105.1 95 48.4
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 5.6e-21 104.4 89 49.4
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 9.6e-21 103.6 100 49.0
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 9.6e-21 103.6 97 47.4
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.6e-20 102.8 90 47.8
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 1.6e-20 102.8 99 45.5
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 2.1e-20 102.4 99 46.5
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 2.1e-20 102.4 83 48.2
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 2.8e-20 102.1 86 48.8
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.1e-19 98.6 103 43.7
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 4.0e-19 98.2 101 45.5
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 4.0e-19 98.2 104 44.2
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 1.2e-18 96.7 88 52.3
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 1.2e-18 96.7 88 52.3
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 1.2e-18 96.7 108 40.7
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 2.0e-18 95.9 101 41.6
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.0e-18 95.9 88 47.7
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 5.8e-18 94.4 79 50.6
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.3e-17 93.2 66 54.5
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.7e-17 92.8 66 54.5
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 2.9e-17 92.0 89 48.3
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 3.8e-17 91.7 109 38.5
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 4.9e-17 91.3 93 47.3
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 4.9e-17 91.3 93 47.3
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 6.4e-17 90.9 99 43.4
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 1.4e-16 89.7 91 49.5
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 1.4e-16 89.7 93 46.2
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 2.4e-16 89.0 93 46.2
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 4.2e-16 88.2 112 37.5
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 1.6e-15 86.3 82 43.9
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 7.9e-15 84.0 47 63.8
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 5.1e-14 81.3 82 41.5
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 5.1e-14 81.3 82 41.5
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 4.3e-13 78.2 120 37.5
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 7.4e-13 77.4 85 42.4
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 1.4e-11 73.2 44 59.1
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 4.2e-08 61.6 98 32.7
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 5.1e-06 54.7 85 32.9


User provided reference genes

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