Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 8.6e-235 816.6 412 100.0
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 1.0e-126 457.6 406 57.6
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 4.0e-123 445.7 403 56.6
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.5e-122 443.7 403 56.6
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 3.5e-119 432.6 412 55.8
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.2e-116 424.1 396 55.3
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.1e-116 423.3 396 55.1
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 1.3e-113 414.1 423 53.0
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 2.2e-113 413.3 385 55.3
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 1.5e-109 400.6 402 52.5
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 9.5e-109 397.9 397 52.9
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 9.5e-109 397.9 406 52.2
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.8e-108 396.4 378 54.2
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 4.7e-108 395.6 404 53.0
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 1.0e-107 394.4 377 54.1
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.3e-107 393.3 393 51.1
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 4.4e-106 389.0 396 52.0
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 7.5e-106 388.3 383 52.2
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.2e-105 386.7 380 53.2
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 2.2e-105 386.7 407 50.1
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.9e-105 386.3 390 51.8
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 2.9e-105 386.3 407 49.4
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.7e-105 386.0 376 53.5
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 6.4e-105 385.2 396 52.0
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 8.3e-105 384.8 396 52.0
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 1.9e-104 383.6 398 51.3
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 3.2e-104 382.9 406 51.2
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 1.6e-103 380.6 407 51.4
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.6e-103 380.6 396 50.3
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 2.0e-103 380.2 396 50.8
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 3.5e-103 379.4 413 48.7
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 4.6e-103 379.0 386 51.0
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 7.8e-103 378.3 397 50.1
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 1.3e-102 377.5 320 57.2
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.7e-102 377.1 399 50.6
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 3.0e-102 376.3 396 50.8
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 5.0e-102 375.6 282 60.6
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 8.6e-102 374.8 407 48.6
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.5e-101 374.0 396 49.0
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 2.5e-101 373.2 387 50.4
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 3.3e-101 372.9 387 50.4
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 3.3e-101 372.9 402 49.8
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 1.6e-100 370.5 414 50.0
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.6e-100 370.5 406 50.5
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 2.8e-100 369.8 406 48.8
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 4.7e-100 369.0 411 50.6
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 6.2e-100 368.6 389 51.2
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 6.2e-100 368.6 411 50.4
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 1.4e-99 367.5 384 50.3
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.4e-99 367.5 396 49.0
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.4e-99 367.5 396 50.8
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 1.8e-99 367.1 411 49.4
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 6.8e-99 365.2 411 47.9
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 1.2e-98 364.4 411 49.4
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.5e-98 364.0 264 62.5
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 2.0e-98 363.6 407 47.4
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 3.4e-98 362.8 404 50.0
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 7.5e-98 361.7 396 49.7
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 9.8e-98 361.3 393 48.6
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 9.8e-98 361.3 365 51.5
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.7e-97 360.5 384 49.5
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 6.4e-97 358.6 387 50.1
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 8.3e-97 358.2 404 49.8
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 8.3e-97 358.2 409 49.4
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 3.2e-96 356.3 381 50.9
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 5.4e-96 355.5 363 51.2
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 7.1e-96 355.1 406 49.8
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 7.1e-96 355.1 408 49.5
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 7.1e-96 355.1 406 49.8
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 7.1e-96 355.1 406 49.8
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 7.1e-96 355.1 361 52.1
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 9.2e-96 354.8 405 48.4
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 1.2e-95 354.4 409 49.4
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 1.6e-95 354.0 393 49.1
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 2.1e-95 353.6 406 49.5
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 2.1e-95 353.6 400 47.0
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 2.1e-95 353.6 404 48.0
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 2.7e-95 353.2 404 49.5
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 3.5e-95 352.8 316 54.7
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 1.0e-94 351.3 356 50.0
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.7e-94 350.5 361 53.5
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 5.1e-94 349.0 281 58.4
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 6.6e-94 348.6 375 49.6
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 6.6e-94 348.6 416 47.8
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 1.1e-93 347.8 409 49.1
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.9e-93 347.1 381 48.8
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 4.9e-89 332.4 396 45.5
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 1.6e-87 327.4 357 51.5
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 3.9e-86 322.8 249 60.2
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.5e-85 320.9 337 50.4
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 2.4e-80 303.5 245 58.0
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 2.8e-76 290.0 212 62.7
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 2.8e-76 290.0 384 43.0
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.9e-72 277.3 296 49.7
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 4.0e-67 259.6 394 41.6
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.8e-51 207.6 409 36.2
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 1.5e-50 204.5 147 62.6
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 1.7e-49 201.1 315 38.4
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 5.0e-49 199.5 363 35.8
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 2.8e-44 183.7 286 35.3
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.8e-43 181.0 302 37.1
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 3.2e-40 170.2 252 43.7
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.3e-37 159.8 208 46.6
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 3.1e-35 153.7 131 58.0
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 3.1e-35 153.7 131 58.0
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.2e-33 147.5 258 34.1
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 4.2e-32 143.3 116 54.3
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 2.8e-28 130.6 198 40.4
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 2.2e-25 120.9 290 32.8
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 1.1e-24 118.6 96 60.4
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.1e-24 118.6 203 39.4
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 2.7e-23 114.0 152 44.1
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 3.1e-19 100.5 209 31.1
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 4.5e-10 70.1 225 30.7
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 8.0e-07 59.3 94 39.4
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 8.0e-07 59.3 92 40.2


User provided reference genes

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