Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18702 Striga asiatica HOM05D005893 ORTHO05D007295 1.2e-104 383.3 196 100.0
SGA_v2.0_scaffold223G42811 Striga asiatica HOM05D005893 ORTHO05D007295 2.4e-54 216.1 189 65.6
SGA_v2.0_scaffold2G01368 Striga asiatica HOM05D005893 ORTHO05D007295 7.4e-35 151.4 217 47.0
SGA_v2.0_scaffold211G42109 Striga asiatica HOM05D005893 ORTHO05D007295 4.9e-31 138.7 205 48.3
Migut.F01727 Erythranthe guttata HOM05D005893 ORTHO05D007295 3.5e-29 132.5 181 44.2
MSTRG.382 Avicennia marina HOM05D005893 ORTHO05D007295 1.9e-27 126.7 193 40.4
SalBow6G7151 Salvia bowleyana HOM05D005893 ORTHO05D007295 6.9e-25 118.2 181 40.9
Dinv31297 Davidia involucrata HOM05D005893 ORTHO05D007295 1.5e-24 117.1 168 40.5
SalBow7G0798 Salvia bowleyana HOM05D005893 ORTHO05D007295 5.8e-24 115.2 151 42.4
Eucgr.G02856 Eucalyptus grandis HOM05D005893 ORTHO05D007295 2.2e-23 113.2 168 40.5
Thecc.10G078600 Theobroma cacao HOM05D005893 ORTHO05D002604 2.9e-23 112.8 181 39.8
Dinv31211 Davidia involucrata HOM05D005893 ORTHO05D007295 1.4e-22 110.5 162 40.1
Ciclev10030991m.g Citrus clementina HOM05D003292 ORTHO05D004237 4.2e-22 109.0 151 44.4
unitig_46.g18354 Utricularia gibba HOM05D005893 ORTHO05D007295 4.2e-22 109.0 165 43.0
Oeu021200.1 Olea europaea HOM05D005893 ORTHO05D007295 5.5e-22 108.6 102 52.0
Atru.chr12.817 Acer truncatum HOM05D005893 ORTHO05D007295 7.1e-22 108.2 168 39.9
Cfa001666 Carpinus fangiana HOM05D005893 ORTHO05D007295 9.3e-22 107.8 94 54.3
COL.COLO4_38473 Corchorus olitorius HOM05D005893 ORTHO05D007295 9.3e-22 107.8 182 39.6
Manes.07G096800 Manihot esculenta HOM05D005893 ORTHO05D007295 9.3e-22 107.8 142 40.1
Glyma.20G181200 Glycine max HOM05D005893 ORTHO05D007295 1.2e-21 107.5 143 42.0
Glyma.10G209400 Glycine max HOM05D005893 ORTHO05D007295 1.6e-21 107.1 114 48.2
CiPaw.01G270700 Carya illinoinensis HOM05D005893 ORTHO05D007295 2.1e-21 106.7 94 52.1
Gohir.A05G295100 Gossypium hirsutum HOM05D005893 ORTHO05D007295 2.1e-21 106.7 181 39.8
PSO339G3974 Papaver somniferum HOM05D005893 ORTHO05D007295 2.1e-21 106.7 127 42.5
QL08p055159 Quercus lobata HOM05D005893 ORTHO05D007295 2.1e-21 106.7 110 46.4
CAN.G305.42 Capsicum annuum HOM05D005893 ORTHO05D007295 2.7e-21 106.3 108 47.2
Psat6g182280 Pisum sativum HOM05D005893 ORTHO05D007295 2.7e-21 106.3 133 41.4
Ca_10554_v3 Cicer arietinum L. HOM05D005893 ORTHO05D007295 3.5e-21 105.9 133 42.9
MELO3C012415.2 Cucumis melo HOM05D005893 ORTHO05D007295 3.5e-21 105.9 150 40.7
CsaV3_5G036140 Cucumis sativus L. HOM05D005893 ORTHO05D007295 3.5e-21 105.9 108 50.0
VMungo0720G1965 Vigna mungo HOM05D005893 ORTHO05D007295 4.6e-21 105.5 123 44.7
Phvul.007G096700 Phaseolus vulgaris HOM05D005893 ORTHO05D007295 6.0e-21 105.1 123 44.7
Cfa014465 Carpinus fangiana HOM05D005893 ORTHO05D007295 7.9e-21 104.8 90 53.3
Nitab4.5_0002194g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 7.9e-21 104.8 131 41.2
Haze_16866 Corylus avellana HOM05D005893 ORTHO05D007295 1.0e-20 104.4 94 52.1
Duzib106G0129 Durio zibethinus HOM05D005893 ORTHO05D007295 1.0e-20 104.4 184 39.1
Lj2C17T1 Lonicera japonica HOM05D005893 ORTHO05D007295 1.3e-20 104.0 121 46.3
Peaxi162Scf00431g00001 Petunia axillaris HOM05D005893 ORTHO05D007295 1.3e-20 104.0 142 38.0
Sed0005810 Sechium edule HOM05D005893 ORTHO05D007295 1.3e-20 104.0 104 49.0
PGR142G3224 Punica granatum HOM05D005893 ORTHO05D007295 1.8e-20 103.6 161 40.4
Lj5g0004254 Lotus japonicus HOM05D005893 ORTHO05D007295 2.3e-20 103.2 115 45.2
Lj5g0008044 Lotus japonicus HOM05D005893 ORTHO05D007295 2.3e-20 103.2 115 45.2
Lj5g0026776 Lotus japonicus HOM05D005893 ORTHO05D007295 2.3e-20 103.2 115 45.2
Nitab4.5_0007148g0010 Nicotiana tabacum HOM05D005893 ORTHO05D007295 2.3e-20 103.2 131 41.2
TPR.G1908 Trifolium pratense HOM05D005893 ORTHO05D007295 2.3e-20 103.2 108 50.0
THA.LOC104825224 Tarenaya hassleriana HOM05D005893 ORTHO05D007295 3.0e-20 102.8 139 40.3
Cc02_g11140 Coffea canephora HOM05D005893 ORTHO05D007295 3.9e-20 102.4 183 37.7
Gorai.009G312400 Gossypium raimondii HOM05D005893 ORTHO05D007295 3.9e-20 102.4 179 38.5
Hma1.2p1_1458F.1_g284765 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 3.9e-20 102.4 158 39.2
PGSC0003DMG400027152 Solanum tuberosum HOM05D005893 ORTHO05D007295 3.9e-20 102.4 91 50.5
Lsat_1_v5_gn_8_20480 Lactuca sativa HOM05D005893 ORTHO05D007295 5.1e-20 102.1 169 36.7
Nn2g11535 Nelumbo nucifera HOM05D005893 ORTHO05D007295 5.1e-20 102.1 135 41.5
HPP92_025345 Vanilla planifolia HOM05D005893 ORTHO05D007295 5.1e-20 102.1 100 50.0
CSS0031267 Camellia sinensis var. sinensis HOM05D005182 ORTHO05D006631 6.7e-20 101.7 154 40.3
Carub.0005s2142 Capsella rubella HOM05D005893 ORTHO05D007295 6.7e-20 101.7 182 37.4
ClCG05G021120 Citrullus lanatus HOM05D005893 ORTHO05D007295 6.7e-20 101.7 89 52.8
HanXRQChr08g0218681 Helianthus annuus HOM05D005893 ORTHO05D007295 6.7e-20 101.7 146 39.7
Sopen05g031760 Solanum pennellii HOM05D005893 ORTHO05D007295 6.7e-20 101.7 90 51.1
DCAR_019095 Daucus carota HOM05D005893 ORTHO05D007295 8.7e-20 101.3 131 41.2
Lalb_Chr02g0152261 Lupinus albus HOM05D005893 ORTHO05D007295 8.7e-20 101.3 123 40.7
Actinidia06754 Actinidia chinensis HOM05D005893 ORTHO05D007295 1.1e-19 100.9 131 42.0
TWI15G0972 Tripterygium wilfordii HOM05D005893 ORTHO05D007295 1.1e-19 100.9 101 51.5
Ah.01g004770 Amaranthus hybridus HOM05D005893 ORTHO05D007295 1.5e-19 100.5 88 53.4
Thhalv10010741m.g Eutrema salsugineum HOM05D005893 ORTHO05D007295 1.5e-19 100.5 127 43.3
Gohir.D05G295800 Gossypium hirsutum HOM05D005893 ORTHO05D007295 1.5e-19 100.5 177 37.3
Sed0025931 Sechium edule HOM05D005893 ORTHO05D007295 1.9e-19 100.1 104 48.1
Hund09872 Selenicereus undatus HOM05D005893 ORTHO05D007295 1.9e-19 100.1 164 37.2
SEGI_03670 Sequoiadendron giganteum HOM05D005893 ORTHO05D007295 1.9e-19 100.1 80 57.5
unitig_37.g12607 Utricularia gibba HOM05D000329 ORTHO05D002132 2.5e-19 99.8 82 53.7
Os02g0819700 Oryza sativa ssp. japonica HOM05D005893 ORTHO05D007295 3.3e-19 99.4 113 45.1
Potri.008G037300 Populus trichocarpa HOM05D005893 ORTHO05D007295 3.3e-19 99.4 174 36.8
Sc20g0001660 Simmondsia chinensis HOM05D005893 ORTHO05D007295 3.3e-19 99.4 79 54.4
Solyc05g053250.4 Solanum lycopersicum HOM05D005893 ORTHO05D007295 3.3e-19 99.4 88 51.1
Cpa.g.sc53.97 Carica papaya HOM05D005893 ORTHO05D007295 4.3e-19 99.0 187 36.9
ATR0680G313 Amborella trichopoda HOM05D005893 ORTHO05D007295 7.4e-19 98.2 81 51.9
Aqoxy1G01187 Aquilegia oxysepala HOM05D005893 ORTHO05D007295 7.4e-19 98.2 94 50.0
CANSAT56G0338 Cannabis sativa HOM05D005893 ORTHO05D007295 7.4e-19 98.2 87 52.9
TAR633G2388 Trochodendron aralioides HOM05D005893 ORTHO05D007295 7.4e-19 98.2 159 39.0
AL5G35910 Arabidopsis lyrata HOM05D005893 ORTHO05D007295 9.7e-19 97.8 183 37.2
ECA233G2346 Erigeron canadensis HOM05D005893 ORTHO05D007295 9.7e-19 97.8 90 48.9
FvH4_7g19000 Fragaria vesca HOM05D005893 ORTHO05D007295 9.7e-19 97.8 107 43.9
FAN06G1961 Fragaria x ananassa HOM05D005893 ORTHO05D007295 9.7e-19 97.8 107 43.9
FAN06G4511 Fragaria x ananassa HOM05D005893 ORTHO05D007295 9.7e-19 97.8 107 43.9
FAN10G0987 Fragaria x ananassa HOM05D005893 ORTHO05D007295 9.7e-19 97.8 107 43.9
MBI05_g31459_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 9.7e-19 97.8 80 52.5
Sabra08G0025100 Salix brachista HOM05D005893 ORTHO05D007295 9.7e-19 97.8 191 35.1
MD07G1171800 Malus domestica HOM05D005893 ORTHO05D007295 1.3e-18 97.4 146 37.0
CARHR164770 Cardamine hirsuta HOM05D005893 ORTHO05D007295 1.6e-18 97.1 172 35.5
FAN03G3224 Fragaria x ananassa HOM05D005893 ORTHO05D007295 1.6e-18 97.1 107 43.9
AUR62014260 Chenopodium quinoa HOM05D005893 ORTHO05D007295 2.2e-18 96.7 154 37.7
FAN01G0197 Fragaria x ananassa HOM05D005893 ORTHO05D007295 2.8e-18 96.3 107 43.9
Zm00001eb259110 Zea mays HOM05D005893 ORTHO05D007295 2.8e-18 96.3 85 49.4
MD01G1105600 Malus domestica HOM05D005893 ORTHO05D007295 3.7e-18 95.9 115 41.7
EL10Ac6g14183 Beta vulgaris HOM05D005893 ORTHO05D007295 6.3e-18 95.1 98 48.0
Medtr1g094720 Medicago truncatula HOM05D005893 ORTHO05D007295 6.3e-18 95.1 137 39.4
AT3G54826 Arabidopsis thaliana HOM05D005893 ORTHO05D007295 8.2e-18 94.7 182 34.6
RcHm_v2.0_Chr1g0362931 Rosa chinensis HOM05D005893 ORTHO05D007295 1.1e-17 94.4 133 36.1
Sp5g07600 Schrenkiella parvula HOM05D005893 ORTHO05D007295 1.4e-17 94.0 107 42.1
GSVIVG01016242001 Vitis vinifera HOM05D003292 ORTHO05D004237 1.4e-17 94.0 164 36.0
EL10Ac6g14385 Beta vulgaris HOM05D005893 ORTHO05D007295 2.4e-17 93.2 98 46.9
AUR62038482 Chenopodium quinoa HOM05D005893 ORTHO05D007295 4.1e-17 92.4 156 37.2
Aa31sc66G40 Aethionema arabicum HOM05D005893 ORTHO05D007295 6.9e-17 91.7 118 39.8
Hma1.2p1_1458F.1_g284770 Hydrangea macrophylla HOM05D005893 ORTHO05D007295 9.0e-17 91.3 87 51.7
A07p22290 Brassica napus HOM05D005893 ORTHO05D007295 2.0e-16 90.1 107 39.3
vmacro07131 Vaccinium macrocarpon HOM05D000972 ORTHO05D001783 2.0e-16 90.1 130 40.0
BcaB01g00158 Brassica carinata HOM05D005893 ORTHO05D007295 2.6e-16 89.7 145 33.8
BcaC07g39781 Brassica carinata HOM05D005893 ORTHO05D007295 4.5e-16 89.0 80 48.8
C08p29970 Brassica napus HOM05D005893 ORTHO05D007295 4.5e-16 89.0 80 48.8
BolC8t50606H Brassica oleracea HOM05D005893 ORTHO05D007295 4.5e-16 89.0 80 48.8
BraA07t29907Z Brassica rapa HOM05D005893 ORTHO05D007295 5.9e-16 88.6 80 48.8
BcaB02g07716 Brassica carinata HOM05D005893 ORTHO05D007295 7.7e-16 88.2 109 37.6
A09p47740 Brassica napus HOM05D005893 ORTHO05D007295 7.7e-16 88.2 80 48.8
BraA09t40232Z Brassica rapa HOM05D005893 ORTHO05D007295 7.7e-16 88.2 80 48.8
BcaC08g44701 Brassica carinata HOM05D005893 ORTHO05D007295 1.0e-15 87.8 107 39.3
C06p22370 Brassica napus HOM05D005893 ORTHO05D007295 1.0e-15 87.8 107 39.3
FAN06G0522 Fragaria x ananassa HOM05D003292 ORTHO05D004237 3.8e-15 85.9 79 45.6
CDE01G0774 Ceratophyllum demersum HOM05D005893 ORTHO05D007295 1.1e-14 84.3 77 53.2
Mapoly0143s0034 Marchantia polymorpha HOM05D005893 ORTHO05D007295 1.9e-14 83.6 76 48.7
AagrBONN_evm.TU.Sc2ySwM_228.2692 Anthoceros agrestis HOM05D005893 ORTHO05D007295 3.2e-14 82.8 115 36.5
CBR_g38445 Chara braunii HOM05D005893 ORTHO05D007295 4.2e-14 82.4 79 43.0
Pp3c10_20870 Physcomitrium patens HOM05D005893 ORTHO05D007295 1.6e-13 80.5 73 52.1
SMO364G0951 Selaginella moellendorffii HOM05D005893 ORTHO05D007295 6.1e-13 78.6 67 49.3
SGA_v2.0_scaffold134G34742 Striga asiatica HOM05D005893 ORTHO05D007295 3.3e-11 72.8 114 43.9
MCO14G392 Micromonas commoda HOM05D005893 ORTHO05D007295 1.1e-09 67.8 119 32.8
MBI05_g31456_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 9.1e-09 64.7 80 42.5
Peaxi162Scf00066g01616 Petunia axillaris HOM05D005893 ORTHO05D007295 2.0e-08 63.5 46 52.2
MBI05_g14981_MAGBIO Magnolia biondii HOM05D005893 ORTHO05D007295 3.2e-06 56.2 108 33.3
Cre07.g334851 Chlamydomonas reinhardtii HOM05D005893 ORTHO05D007295 5.5e-06 55.5 112 29.5
Mapoly0032s0026 Marchantia polymorpha HOM05D005893 ORTHO05D007295 5.5e-06 55.5 135 28.1


User provided reference genes

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