Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18700 Striga asiatica HOM05D011878 ORTHO05D011270 2.2e-54 215.3 105 100.0
SGA_v2.0_scaffold14G06875 Striga asiatica HOM05D011878 ORTHO05D011270 3.4e-39 164.9 103 83.5
SGA_v2.0_scaffold124G33518 Striga asiatica HOM05D000045 ORTHO05D011270 1.2e-28 129.8 181 45.3
SGA_v2.0_scaffold3G01819 Striga asiatica HOM05D011878 ORTHO05D011270 1.7e-25 119.4 172 41.9
SGA_v2.0_scaffold8G04271 Striga asiatica HOM05D011878 ORTHO05D011270 9.1e-24 113.6 131 49.6
SGA_v2.0_scaffold177G39432 Striga asiatica HOM05D011878 ORTHO05D011270 1.2e-23 113.2 131 48.9
SGA_v2.0_scaffold57G20196 Striga asiatica HOM05D011878 ORTHO05D011270 1.6e-23 112.8 148 48.6
SGA_v2.0_scaffold20G08945 Striga asiatica HOM05D011878 ORTHO05D011270 7.0e-16 87.4 47 91.5
SGA_v2.0_scaffold51G18773 Striga asiatica HOM05D011878 ORTHO05D011270 3.2e-13 78.6 42 92.9
Oeu064496.1 Olea europaea HOM05D000045 ORTHO05D011270 4.2e-13 78.2 49 67.3
SGA_v2.0_scaffold260G45850 Striga asiatica HOM05D011878 ORTHO05D016966 1.2e-12 76.6 82 53.7
Oeu062020.2 Olea europaea HOM05D000045 ORTHO05D000067 1.6e-12 76.3 53 64.2
SGA_v2.0_scaffold16G07519 Striga asiatica HOM05D011878 ORTHO05D011270 8.0e-12 73.9 42 85.7
SGA_v2.0_scaffold185G40051 Striga asiatica HOM05D011878 ORTHO05D011270 1.4e-11 73.2 42 85.7
Rhsim05G0121900 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.3e-11 72.4 63 57.1
Rhsim13G0132100 Rhododendron simsii HOM05D000045 ORTHO05D010036 2.3e-11 72.4 64 50.0
Rhsim01G0177800 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.2e-11 71.2 63 55.6
Rhsim03G0080900 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.8e-11 70.9 63 55.6
Rhsim05G0110700 Rhododendron simsii HOM05D000045 ORTHO05D011270 6.8e-11 70.9 52 61.5
Rhsim10G0159200 Rhododendron simsii HOM05D000045 ORTHO05D000067 6.8e-11 70.9 52 61.5
Rhsim02G0163600 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.8e-11 70.5 63 55.6
RhsimUnG0089200 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.5e-10 69.7 52 61.5
Rhsim07G0160800 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-10 69.3 63 54.0
Rhsim09G0080800 Rhododendron simsii HOM05D000045 ORTHO05D011270 2.0e-10 69.3 52 59.6
RhsimUnG0116300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.0e-10 69.3 63 54.0
Rhsim04G0171600 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.6e-10 68.9 52 57.7
SGA_v2.0_scaffold10G05309 Striga asiatica HOM05D011878 ORTHO05D011270 5.7e-10 67.8 54 61.1
SGA_v2.0_scaffold21G09318 Striga asiatica HOM05D000045 ORTHO05D011270 5.7e-10 67.8 65 53.8
Rhsim05G0121500 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-09 66.6 52 57.7
Rhsim05G0139300 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-09 66.6 55 56.4
TWI09G1477 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.2e-09 65.9 52 59.6
Rhsim06G0088300 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.8e-09 65.5 49 57.1
Rhsim11G0078300 Rhododendron simsii HOM05D000045 ORTHO05D011270 2.8e-09 65.5 52 53.8
Rhsim08G0146600 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.7e-09 65.1 49 59.2
Ciclev10013881m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.4e-08 63.2 53 56.6
Rhsim08G0163800 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.8e-08 62.8 52 55.8
TWI73G0409 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.4e-08 62.4 62 51.6
Rhsim07G0159000 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.1e-08 62.0 53 52.8
TWI53G1228 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.1e-08 62.0 53 52.8
TWI56G0811 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.1e-08 62.0 53 52.8
TWI09G0017 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-08 61.6 53 52.8
TWI53G2134 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-08 61.6 53 52.8
TWI60G1709 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-08 61.6 53 52.8
TWI74G0282 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-08 61.6 53 52.8
TWI79G0465 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.1e-08 61.6 53 52.8
Aqoxy4G01093 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 7.0e-08 60.8 53 54.7
Ciclev10018310m.g Citrus clementina HOM05D000045 ORTHO05D000067 7.0e-08 60.8 53 54.7
Rhsim09G0160500 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.0e-08 60.8 52 48.1
Aqoxy3G00990 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.2e-07 60.1 53 54.7
Aqoxy7G02431 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.2e-07 60.1 53 54.7
Rhsim08G0142800 Rhododendron simsii HOM05D000002 ORTHO05D009184 1.2e-07 60.1 53 49.1
TWI14G0214 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-07 59.7 62 50.0
TWI14G1038 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.6e-07 59.7 52 53.8
TWI31G1262 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-07 59.3 53 52.8
FvH4_2g03921 Fragaria vesca HOM05D000045 ORTHO05D000067 2.7e-07 58.9 53 49.1
Rhsim08G0139400 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.7e-07 58.9 52 51.9
Rhsim01G0113700 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.5e-07 58.5 53 49.1
Rhsim11G0003900 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.5e-07 58.5 53 49.1
RhsimUnG0196300 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.5e-07 58.5 53 49.1
Rhsim11G0066300 Rhododendron simsii HOM05D000045 ORTHO05D011270 4.5e-07 58.2 53 47.2
TWI79G1218 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.5e-07 58.2 63 46.0
Rhsim02G0105500 Rhododendron simsii HOM05D000045 ORTHO05D010036 7.7e-07 57.4 53 50.9
Aqoxy7G02429 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.0e-06 57.0 53 52.8
Rhsim01G0174900 Rhododendron simsii HOM05D000045 ORTHO05D011270 1.3e-06 56.6 52 46.2
Rhsim02G0171700 Rhododendron simsii HOM05D000045 ORTHO05D000067 1.3e-06 56.6 53 49.1
TWI38G1085 Tripterygium wilfordii HOM05D000045 ORTHO05D011270 1.3e-06 56.6 42 64.3
Rhsim02G0184800 Rhododendron simsii HOM05D000045 ORTHO05D010036 1.7e-06 56.2 53 50.9
Ciclev10033482m.g Citrus clementina HOM05D000045 ORTHO05D010036 2.3e-06 55.8 49 53.1
Rhsim05G0048700 Rhododendron simsii HOM05D000045 ORTHO05D000067 2.9e-06 55.5 53 47.2
Oeu032610.1 Olea europaea HOM05D000045 ORTHO05D000611 3.8e-06 55.1 39 64.1
Rhsim04G0129100 Rhododendron simsii HOM05D000045 ORTHO05D000067 3.8e-06 55.1 52 46.2
Atru.chr3.2698 Acer truncatum HOM05D000045 ORTHO05D000067 5.0e-06 54.7 49 51.0
Rhsim13G0127000 Rhododendron simsii HOM05D000045 ORTHO05D000067 8.6e-06 53.9 53 49.1


User provided reference genes

Program Settings