Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18699 Striga asiatica HOM05D046673 ORTHO05D011270 8.5e-125 450.3 217 100.0
SGA_v2.0_scaffold51G18698 Striga asiatica HOM05D046673 ORTHO05D011270 3.9e-61 238.8 141 78.7
SGA_v2.0_scaffold185G40051 Striga asiatica HOM05D011878 ORTHO05D011270 1.3e-24 117.5 77 76.6
SGA_v2.0_scaffold16G07519 Striga asiatica HOM05D011878 ORTHO05D011270 1.7e-24 117.1 77 75.3
Migut.G01240 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.6e-14 84.0 148 31.1
Migut.F01754 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.0e-12 77.0 111 32.4
Migut.F01731 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.6e-12 76.6 109 33.0
SalBow6G0076 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.3e-12 76.3 113 32.7
Migut.F01926 Erythranthe guttata HOM05D000256 ORTHO05D000119 9.7e-12 74.7 136 34.6
Migut.F01937 Erythranthe guttata HOM05D000256 ORTHO05D000119 4.8e-11 72.4 107 35.5
Migut.F01730 Erythranthe guttata HOM05D000256 ORTHO05D000119 6.3e-11 72.0 113 31.0
MSTRG.9165 Avicennia marina HOM05D000256 ORTHO05D000119 1.1e-10 71.2 99 37.4
Migut.F01924 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.1e-10 71.2 136 33.1
Migut.F01736 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.4e-10 70.9 112 33.0
Migut.F01936 Erythranthe guttata HOM05D000256 ORTHO05D000119 9.1e-10 68.2 113 36.3
Migut.F01732 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.2e-09 67.8 124 30.6
Oeu041131.1 Olea europaea HOM05D000045 ORTHO05D011270 2.0e-09 67.0 71 45.1
SGA_v2.0_scaffold8G04271 Striga asiatica HOM05D011878 ORTHO05D011270 7.7e-09 65.1 74 43.2
SalBow7G0504 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.0e-08 64.7 104 33.7
SalBow7G1990 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.0e-08 64.7 104 33.7
MSTRG.3399 Avicennia marina HOM05D000256 ORTHO05D000119 2.2e-08 63.5 133 33.1
SalBow4G0147 Salvia bowleyana HOM05D000256 ORTHO05D000119 2.9e-08 63.2 110 30.0
Oeu022154.1 Olea europaea HOM05D000256 ORTHO05D000119 3.8e-08 62.8 132 29.5
Migut.G01208 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.4e-07 60.8 94 30.9
Prupe.1G074100 Prunus persica HOM05D014194 ORTHO05D011270 1.4e-07 60.8 69 42.0
Oeu032610.1 Olea europaea HOM05D000045 ORTHO05D000611 1.9e-07 60.5 71 40.8
SalBow4G1675 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.9e-07 60.5 101 35.6
SalBow4G3261 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.9e-07 60.5 115 29.6
Aqoxy1G02677 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 3.2e-07 59.7 77 33.8
Migut.F01745 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.2e-07 59.7 96 28.1
Migut.F01649 Erythranthe guttata HOM05D000256 ORTHO05D000119 5.5e-07 58.9 136 26.5
Oeu064496.1 Olea europaea HOM05D000045 ORTHO05D011270 5.5e-07 58.9 72 41.7
CAN.G1155.35 Capsicum annuum HOM05D000256 ORTHO05D000119 7.2e-07 58.5 110 32.7
SalBow4G1737 Salvia bowleyana HOM05D000256 ORTHO05D000119 7.2e-07 58.5 142 27.5
SGA_v2.0_scaffold13G06375 Striga asiatica HOM05D000256 ORTHO05D000119 7.2e-07 58.5 88 33.0
FAN09G4686 Fragaria x ananassa HOM05D000045 ORTHO05D011270 9.4e-07 58.2 75 40.0
Migut.F01908 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.2e-06 57.8 123 28.5
MBI06_g15025_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 1.2e-06 57.8 75 38.7
TWI53G1228 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-06 57.8 65 46.2
TWI56G0811 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-06 57.8 65 46.2
Migut.F01740 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.6e-06 57.4 85 31.8
Migut.G00648 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.6e-06 57.4 87 32.2
FAN07G1780 Fragaria x ananassa HOM05D000045 ORTHO05D011270 2.1e-06 57.0 75 40.0
CSS0016804 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.7e-06 56.6 69 37.7
Migut.G01214 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.7e-06 56.6 123 29.3
Hma1.2p1_0032F.1_g018650 Hydrangea macrophylla HOM05D000045 ORTHO05D000067 2.7e-06 56.6 69 37.7
MD15G1227300 Malus domestica HOM05D000045 ORTHO05D000067 2.7e-06 56.6 64 40.6
PSO675G0702 Papaver somniferum HOM05D000256 ORTHO05D000119 3.6e-06 56.2 106 31.1
Potri.011G145800 Populus trichocarpa HOM05D000045 ORTHO05D000067 3.6e-06 56.2 86 34.9
TWI53G2134 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.6e-06 56.2 65 46.2
TWI79G0465 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.6e-06 56.2 65 46.2
HanXRQChr14g0455151 Helianthus annuus HOM05D000045 ORTHO05D000067 4.7e-06 55.8 68 36.8
Migut.F01737 Erythranthe guttata HOM05D000256 ORTHO05D000119 6.1e-06 55.5 81 30.9
Migut.O00582 Erythranthe guttata HOM05D000045 ORTHO05D000067 6.1e-06 55.5 68 36.8
Solyc01g112320.3 Solanum lycopersicum HOM05D000045 ORTHO05D000067 6.1e-06 55.5 92 31.5
Sopen01g054420 Solanum pennellii HOM05D000045 ORTHO05D000067 6.1e-06 55.5 92 31.5
SGA_v2.0_scaffold13G06524 Striga asiatica HOM05D000256 ORTHO05D000119 6.1e-06 55.5 101 28.7
unitig_736.g22327 Utricularia gibba HOM05D000256 ORTHO05D000119 6.1e-06 55.5 107 30.8
BcaC07g36891 Brassica carinata HOM05D000256 ORTHO05D000119 7.9e-06 55.1 84 33.3
C08p01360 Brassica napus HOM05D000256 ORTHO05D000119 7.9e-06 55.1 84 33.3
BolC8t46945H Brassica oleracea HOM05D000256 ORTHO05D000119 7.9e-06 55.1 84 34.5
CSS0007508 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.9e-06 55.1 64 37.5
CSS0016715 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.9e-06 55.1 64 37.5
CDE12G0459 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 7.9e-06 55.1 77 37.7
Migut.F01650 Erythranthe guttata HOM05D000256 ORTHO05D000119 7.9e-06 55.1 87 34.5
Migut.F01741 Erythranthe guttata HOM05D000256 ORTHO05D000119 7.9e-06 55.1 88 30.7
Nn5g31065 Nelumbo nucifera HOM05D000045 ORTHO05D000067 7.9e-06 55.1 64 37.5
Nn5g31066 Nelumbo nucifera HOM05D000045 ORTHO05D000067 7.9e-06 55.1 64 37.5


User provided reference genes

Program Settings