Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18653 Striga asiatica HOM05D032558 ORTHO05D000639 4.0e-99 364.8 184 100.0
SGA_v2.0_scaffold253G45160 Striga asiatica HOM05D000333 ORTHO05D000190 2.5e-24 116.3 87 70.1
SGA_v2.0_scaffold38G14952 Striga asiatica HOM05D032558 ORTHO05D015423 9.4e-24 114.4 70 82.9
SGA_v2.0_scaffold48G17941 Striga asiatica HOM05D032558 ORTHO05D000639 2.3e-22 109.8 76 77.6
Migut.F00027 Erythranthe guttata HOM05D000333 ORTHO05D000190 9.1e-11 71.2 78 55.1
CSS0035342 Camellia sinensis var. sinensis HOM05D000333 ORTHO05D000190 7.7e-10 68.2 75 52.0
Dinv25629 Davidia involucrata HOM05D000333 ORTHO05D000190 4.7e-07 58.9 98 40.8
Dinv33299 Davidia involucrata HOM05D000333 ORTHO05D000190 6.1e-07 58.5 64 56.2
Thecc.04G043200 Theobroma cacao HOM05D000333 ORTHO05D000190 6.1e-07 58.5 115 35.7
Duzib147G1404 Durio zibethinus HOM05D000333 ORTHO05D000190 1.0e-06 57.8 73 45.2
Lsat_1_v5_gn_9_36460 Lactuca sativa HOM05D000333 ORTHO05D000190 1.4e-06 57.4 106 39.6
Lsat_1_v5_gn_9_36521 Lactuca sativa HOM05D000333 ORTHO05D000190 1.4e-06 57.4 106 39.6
Gohir.A05G335000 Gossypium hirsutum HOM05D000333 ORTHO05D000190 3.0e-06 56.2 72 45.8
Gohir.D04G073800 Gossypium hirsutum HOM05D000333 ORTHO05D000190 3.0e-06 56.2 72 45.8
Gorai.012G083200 Gossypium raimondii HOM05D000333 ORTHO05D000190 3.0e-06 56.2 72 45.8
Potri.001G324600 Populus trichocarpa HOM05D000333 ORTHO05D000190 3.0e-06 56.2 83 44.6
QL02p070381 Quercus lobata HOM05D000333 ORTHO05D000190 3.0e-06 56.2 77 44.2
Cpa.g.sc70.98 Carica papaya HOM05D000333 ORTHO05D000190 5.2e-06 55.5 82 41.5


User provided reference genes

Program Settings