Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18645 Striga asiatica HOM05D005245 ORTHO05D006388 7.5e-125 450.7 251 100.0
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 6.5e-52 208.4 192 60.4
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 1.7e-44 183.7 177 57.6
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 1.1e-43 181.0 268 48.1
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 3.2e-43 179.5 187 52.9
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 2.1e-42 176.8 172 53.5
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 4.7e-42 175.6 172 54.1
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 8.0e-42 174.9 175 52.0
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 4.0e-41 172.6 153 58.2
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 8.8e-41 171.4 184 51.1
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 8.8e-41 171.4 145 59.3
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 1.5e-40 170.6 150 56.7
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 2.6e-40 169.9 145 58.6
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 3.3e-40 169.5 153 57.5
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 4.4e-40 169.1 180 52.2
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 9.7e-40 167.9 176 51.1
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 4.8e-39 165.6 273 48.4
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 4.1e-38 162.5 166 49.4
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 5.3e-38 162.2 131 61.8
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 5.3e-38 162.2 131 61.8
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 1.2e-37 161.0 190 47.4
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 2.7e-37 159.8 131 61.1
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 4.5e-37 159.1 250 43.6
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 2.9e-36 156.4 155 52.9
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 2.9e-36 156.4 172 50.6
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 2.9e-36 156.4 177 50.3
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 3.8e-36 156.0 174 48.9
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 6.5e-36 155.2 151 52.3
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 6.5e-36 155.2 134 60.4
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 1.5e-35 154.1 236 41.1
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 3.2e-35 152.9 133 56.4
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 7.2e-35 151.8 153 52.3
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 9.4e-35 151.4 210 43.3
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 1.2e-34 151.0 172 48.3
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 2.7e-34 149.8 185 44.9
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 3.6e-34 149.4 153 50.3
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 3.6e-34 149.4 179 45.8
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 6.1e-34 148.7 236 46.2
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 8.0e-34 148.3 151 53.0
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 1.0e-33 147.9 146 51.4
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 1.0e-33 147.9 241 36.9
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 1.4e-33 147.5 129 58.9
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 1.8e-33 147.1 169 47.9
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 4.0e-33 146.0 151 52.3
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 4.0e-33 146.0 163 47.2
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 6.8e-33 145.2 150 50.0
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 6.8e-33 145.2 189 44.4
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 8.8e-33 144.8 163 47.9
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 1.2e-32 144.4 187 46.0
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 2.6e-32 143.3 169 50.3
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 4.4e-32 142.5 176 48.9
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 4.4e-32 142.5 152 50.0
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 7.5e-32 141.7 138 52.9
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 7.5e-32 141.7 185 42.7
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 1.3e-31 141.0 272 34.9
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 1.3e-31 141.0 234 38.5
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 1.3e-31 141.0 140 55.7
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 1.7e-31 140.6 134 53.7
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 2.2e-31 140.2 133 57.9
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 4.8e-31 139.0 133 57.1
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 4.8e-31 139.0 180 44.4
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 1.1e-30 137.9 195 41.0
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 1.4e-30 137.5 170 46.5
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 1.4e-30 137.5 133 54.9
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 1.4e-30 137.5 132 54.5
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 1.8e-30 137.1 133 54.1
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 1.8e-30 137.1 133 54.1
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 2.4e-30 136.7 133 54.1
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 2.4e-30 136.7 133 54.1
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 2.4e-30 136.7 133 54.1
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 2.4e-30 136.7 133 54.1
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 2.4e-30 136.7 236 37.3
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 2.4e-30 136.7 155 49.7
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 2.4e-30 136.7 139 53.2
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 5.4e-30 135.6 152 45.4
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 7.0e-30 135.2 272 36.0
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 7.0e-30 135.2 146 48.6
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 9.1e-30 134.8 133 54.1
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 9.1e-30 134.8 133 54.1
CDE10G0522 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 9.1e-30 134.8 174 42.5
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 9.1e-30 134.8 129 54.3
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 1.2e-29 134.4 180 42.2
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 7.7e-29 131.7 133 55.6
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 7.7e-29 131.7 133 52.6
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 1.0e-28 131.3 146 43.2
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 1.7e-28 130.6 174 42.0
CDE10G0045 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 2.2e-28 130.2 175 41.1
Medtr4g079510 Medicago truncatula HOM05D005245 ORTHO05D006388 5.0e-28 129.0 162 43.8
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 8.5e-28 128.3 148 48.0
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 1.5e-27 127.5 240 36.2
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 1.9e-27 127.1 173 39.3
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 1.9e-27 127.1 148 48.0
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 3.2e-27 126.3 134 51.5
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 3.2e-27 126.3 249 43.0
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 4.2e-27 125.9 133 50.4
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 4.2e-27 125.9 226 35.4
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 5.5e-27 125.6 133 50.4
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 7.2e-27 125.2 148 44.6
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.2e-26 124.4 148 44.6
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 1.6e-26 124.0 150 44.7
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 2.7e-26 123.2 178 39.9
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 3.6e-26 122.9 175 42.3
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 4.7e-26 122.5 179 41.9
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 8.0e-26 121.7 138 43.5
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 6.8e-25 118.6 153 43.1
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 1.5e-24 117.5 153 42.5
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 5.7e-24 115.5 160 41.9
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 9.8e-24 114.8 138 47.8
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 3.7e-23 112.8 175 38.3
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 3.7e-23 112.8 225 33.8
HPP92_024035 Vanilla planifolia HOM05D005245 ORTHO05D006388 2.4e-22 110.2 172 41.3
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 9.2e-22 108.2 141 47.5
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 2.0e-21 107.1 239 34.7
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 2.7e-21 106.7 139 43.2
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 1.0e-20 104.8 174 35.6
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 1.3e-20 104.4 245 33.5
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 8.6e-20 101.7 130 43.8
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 1.1e-19 101.3 170 36.5
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 6.1e-18 95.5 258 29.5
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 2.6e-16 90.1 177 32.8
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 3.1e-09 66.6 102 35.3
Ah.09g225920 Amaranthus hybridus HOM05D005245 ORTHO05D006388 3.2e-06 56.6 83 37.3


User provided reference genes

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