Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold51G18623 Striga asiatica HOM05D008827 ORTHO05D011155 2.0e-163 578.9 278 100.0
Migut.N01452 Erythranthe guttata HOM05D008827 ORTHO05D011155 2.2e-48 196.8 245 43.3
SGA_v2.0_scaffold106G30657 Striga asiatica HOM05D008827 ORTHO05D011155 3.1e-47 193.0 269 42.8
Migut.N01773 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.0e-42 177.9 272 36.4
Migut.K01435 Erythranthe guttata HOM05D008827 ORTHO05D011155 5.2e-42 175.6 245 40.0
Migut.N01766 Erythranthe guttata HOM05D008827 ORTHO05D011155 8.8e-42 174.9 273 36.6
SGA_v2.0_scaffold106G30592 Striga asiatica HOM05D008827 ORTHO05D011155 7.5e-41 171.8 264 40.5
Migut.C00734 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.3e-40 171.0 254 38.2
Migut.H02497 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.4e-39 167.5 231 44.2
Migut.N01776 Erythranthe guttata HOM05D008827 ORTHO05D011155 2.4e-39 166.8 272 35.3
Migut.N01775 Erythranthe guttata HOM05D008827 ORTHO05D011155 4.1e-39 166.0 249 41.0
Migut.N01769 Erythranthe guttata HOM05D008827 ORTHO05D011155 2.0e-38 163.7 275 34.9
Migut.M01322 Erythranthe guttata HOM05D008827 ORTHO05D011155 5.9e-38 162.2 253 40.7
Migut.C00142 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.3e-37 161.0 261 37.5
Migut.K00746 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.9e-36 157.1 249 36.5
Migut.H02164 Erythranthe guttata HOM05D008827 ORTHO05D011155 7.2e-36 155.2 267 37.8
Migut.N01764 Erythranthe guttata HOM05D008827 ORTHO05D011155 2.1e-35 153.7 268 37.3
Migut.C00803 Erythranthe guttata HOM05D008827 ORTHO05D011155 4.7e-35 152.5 259 36.7
SGA_v2.0_scaffold118G32482 Striga asiatica HOM05D008827 ORTHO05D011155 6.1e-35 152.1 250 34.8
Migut.N01735 Erythranthe guttata HOM05D008827 ORTHO05D011155 4.0e-34 149.4 248 35.1
Migut.M00156 Erythranthe guttata HOM05D008827 ORTHO05D011155 8.8e-34 148.3 258 36.0
SGA_v2.0_scaffold6G03208 Striga asiatica HOM05D008827 ORTHO05D011155 7.5e-33 145.2 247 35.6
SGA_v2.0_scaffold6G03193 Striga asiatica HOM05D008827 ORTHO05D011155 1.3e-32 144.4 247 35.2
Migut.N01629 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.4e-31 141.0 269 34.6
SGA_v2.0_scaffold64G21883 Striga asiatica HOM05D008827 ORTHO05D011155 1.8e-31 140.6 219 36.1
Migut.N01643 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.6e-30 137.5 204 37.3
Migut.N01774 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.9e-28 130.6 208 38.0
SGA_v2.0_scaffold6G03196 Striga asiatica HOM05D008827 ORTHO05D011155 1.6e-27 127.5 246 33.7
Migut.N01610 Erythranthe guttata HOM05D008827 ORTHO05D011155 2.8e-27 126.7 262 35.1
Migut.N01451 Erythranthe guttata HOM05D008827 ORTHO05D011155 4.5e-22 109.4 251 31.1
Migut.C00146 Erythranthe guttata HOM05D008827 ORTHO05D011155 2.9e-21 106.7 137 38.7
Migut.L00929 Erythranthe guttata HOM05D008827 ORTHO05D011155 1.2e-19 101.3 151 38.4
Migut.K00949 Erythranthe guttata HOM05D008827 ORTHO05D011155 6.4e-16 89.0 204 33.3
SGA_v2.0_scaffold123G33480 Striga asiatica HOM05D008827 ORTHO05D406190 7.3e-12 75.5 142 38.7
Solyc02g082890.1 Solanum lycopersicum HOM05D038991 ORTHO05D011155 1.6e-11 74.3 223 24.7
Migut.L00086 Erythranthe guttata HOM05D008827 ORTHO05D023676 4.7e-11 72.8 51 60.8
PGSC0003DMG400041382 Solanum tuberosum HOM05D038991 ORTHO05D011155 4.4e-09 66.2 147 29.3
SGA_v2.0_scaffold32G13202 Striga asiatica HOM05D008827 ORTHO05D011155 2.2e-08 63.9 98 35.7
Peaxi162Scf00038g02344 Petunia axillaris HOM05D000440 ORTHO05D008998 3.2e-07 60.1 50 44.0
Duzib168G2277 Durio zibethinus HOM05D000440 ORTHO05D000295 1.2e-06 58.2 69 37.7
Gohir.D05G357175 Gossypium hirsutum HOM05D000086 ORTHO05D001065 2.1e-06 57.4 49 40.8
Gorai.009G389600 Gossypium raimondii HOM05D000086 ORTHO05D001065 2.1e-06 57.4 49 40.8
Nitab4.5_0006966g0090 Nicotiana tabacum HOM05D000354 ORTHO05D008998 2.1e-06 57.4 45 48.9
MSTRG.4969 Avicennia marina HOM05D000086 ORTHO05D008998 3.5e-06 56.6 51 43.1
Gohir.A04G029804 Gossypium hirsutum HOM05D000440 ORTHO05D001065 3.5e-06 56.6 49 40.8
TPR.G29471 Trifolium pratense HOM05D000086 ORTHO05D008998 3.5e-06 56.6 52 36.5
GSVIVG01018343001 Vitis vinifera HOM05D000086 ORTHO05D004422 3.5e-06 56.6 47 44.7
Zm00001eb290630 Zea mays HOM05D000440 ORTHO05D000295 3.5e-06 56.6 60 38.3
CANSAT78G0120 Cannabis sativa HOM05D000086 ORTHO05D003081 4.6e-06 56.2 74 31.1
arahy.Tifrunner.gnm1.ann1.08TDR6 Arachis hypogaea HOM05D000086 ORTHO05D000431 6.0e-06 55.8 61 36.1
arahy.Tifrunner.gnm1.ann1.CFK95L Arachis hypogaea HOM05D000086 ORTHO05D000431 6.0e-06 55.8 61 36.1
CANSAT25G2728 Cannabis sativa HOM05D000086 ORTHO05D004422 6.0e-06 55.8 47 40.4
Cfa008325 Carpinus fangiana HOM05D000086 ORTHO05D003081 6.0e-06 55.8 63 34.9
Haze_11346 Corylus avellana HOM05D000086 ORTHO05D003081 6.0e-06 55.8 63 34.9
Haze_11347 Corylus avellana HOM05D000086 ORTHO05D003081 6.0e-06 55.8 63 34.9
Duzib268G1824 Durio zibethinus HOM05D000086 ORTHO05D004422 6.0e-06 55.8 47 42.6
Potri.005G071300 Populus trichocarpa HOM05D000086 ORTHO05D000431 6.0e-06 55.8 54 40.7
Sed0010497 Sechium edule HOM05D000157 ORTHO05D000311 6.0e-06 55.8 64 35.9
Zm00001eb327570 Zea mays HOM05D000086 ORTHO05D000311 6.0e-06 55.8 48 45.8
Cre13.g580750 Chlamydomonas reinhardtii HOM05D000082 ORTHO05D000038 7.8e-06 55.5 57 38.6
Sabra05G0058300 Salix brachista HOM05D000086 ORTHO05D000431 7.8e-06 55.5 54 40.7


User provided reference genes

Program Settings