Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold515G52653 Striga asiatica HOM05D007228 ORTHO05D009099 0.0e+00 1278.5 646 100.0
SalBow1G3473 Salvia bowleyana HOM05D007228 ORTHO05D009099 4.3e-225 785.0 660 62.9
Migut.D01167 Erythranthe guttata HOM05D007228 ORTHO05D009099 2.1e-219 766.1 669 61.9
Dinv13695 Davidia involucrata HOM05D007228 ORTHO05D009099 1.7e-189 666.8 668 53.9
Peaxi162Scf00314g00833 Petunia axillaris HOM05D007228 ORTHO05D009099 1.8e-183 646.7 663 52.9
Hma1.2p1_0338F.1_g129520 Hydrangea macrophylla HOM05D007228 ORTHO05D009099 1.6e-182 643.7 659 53.9
Solyc03g117990.1 Solanum lycopersicum HOM05D007228 ORTHO05D009099 3.5e-182 642.5 661 51.9
Sopen03g036890 Solanum pennellii HOM05D007228 ORTHO05D009099 9.4e-180 634.4 661 51.9
Cc04_g05590 Coffea canephora HOM05D007228 ORTHO05D009099 4.7e-179 632.1 659 53.4
Nitab4.5_0011883g0020 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.4e-177 625.9 656 51.7
Ciclev10030919m.g Citrus clementina HOM05D007228 ORTHO05D009099 1.8e-175 620.2 667 51.9
Potri.015G109700 Populus trichocarpa HOM05D007228 ORTHO05D009099 2.7e-174 616.3 662 50.9
Nitab4.5_0000976g0280 Nicotiana tabacum HOM05D007228 ORTHO05D009099 3.5e-174 615.9 647 51.0
Cpa.g.sc13.201 Carica papaya HOM05D007228 ORTHO05D009099 1.9e-172 610.1 674 50.1
Atru.chr6.1953 Acer truncatum HOM05D007228 ORTHO05D009099 7.2e-172 608.2 663 49.9
Rhsim08G0200200 Rhododendron simsii HOM05D007228 ORTHO05D009099 7.2e-172 608.2 674 50.9
Duzib205G0703 Durio zibethinus HOM05D007228 ORTHO05D009099 1.0e-170 604.4 675 51.0
GSVIVG01014990001 Vitis vinifera HOM05D007228 ORTHO05D009099 8.3e-168 594.7 664 50.3
Actinidia18280 Actinidia chinensis HOM05D007228 ORTHO05D009099 1.1e-167 594.3 674 49.9
QL10p000149 Quercus lobata HOM05D007228 ORTHO05D009099 1.6e-166 590.5 667 50.2
TWI39G0517 Tripterygium wilfordii HOM05D007228 ORTHO05D009099 7.8e-166 588.2 671 49.3
Gohir.D12G197500 Gossypium hirsutum HOM05D007228 ORTHO05D009099 2.1e-163 580.1 669 47.5
Manes.06G128600 Manihot esculenta HOM05D007228 ORTHO05D009099 3.6e-163 579.3 671 48.4
CAN.G1008.38 Capsicum annuum HOM05D007228 ORTHO05D009099 5.4e-159 565.5 689 47.2
COL.COLO4_37286 Corchorus olitorius HOM05D007228 ORTHO05D009099 3.5e-158 562.8 670 47.2
Lj4g0027006 Lotus japonicus HOM05D007228 ORTHO05D009099 1.9e-156 557.0 668 47.3
FvH4_5g10000 Fragaria vesca HOM05D007228 ORTHO05D009099 1.2e-153 547.7 670 47.5
Gohir.A12G195100 Gossypium hirsutum HOM05D007228 ORTHO05D009099 1.5e-153 547.4 653 46.2
CARHR205770 Cardamine hirsuta HOM05D007228 ORTHO05D009099 7.5e-153 545.0 674 46.1
FAN18G1110 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.9e-152 543.1 667 47.4
Gorai.008G212000 Gossypium raimondii HOM05D007228 ORTHO05D009099 2.9e-152 543.1 648 46.5
vmacro19097 Vaccinium macrocarpon HOM05D007228 ORTHO05D009099 4.9e-152 542.3 499 56.3
AL6G17680 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 6.4e-152 542.0 668 46.3
MD06G1128600 Malus domestica HOM05D007228 ORTHO05D009099 1.9e-151 540.4 700 45.7
AT5G07380 Arabidopsis thaliana HOM05D007228 ORTHO05D009099 3.2e-151 539.7 660 46.4
Haze_07072 Corylus avellana HOM05D007228 ORTHO05D009099 4.6e-150 535.8 711 45.9
arahy.Tifrunner.gnm1.ann1.E4K3LT Arachis hypogaea HOM05D007228 ORTHO05D009099 6.0e-150 535.4 667 46.2
arahy.Tifrunner.gnm1.ann1.RK1GDQ Arachis hypogaea HOM05D007228 ORTHO05D009099 3.9e-149 532.7 667 45.9
Glyma.08G006100 Glycine max HOM05D007228 ORTHO05D009099 2.5e-148 530.0 665 46.0
Thhalv10012911m.g Eutrema salsugineum HOM05D007228 ORTHO05D009099 1.2e-147 527.7 685 45.4
FAN04G0692 Fragaria x ananassa HOM05D007228 ORTHO05D009099 6.2e-147 525.4 647 46.7
Ca_16830_v3 Cicer arietinum L. HOM05D007228 ORTHO05D009099 8.1e-147 525.0 668 45.2
Aqoxy5G02968 Aquilegia oxysepala HOM05D007228 ORTHO05D009099 5.2e-146 522.3 671 45.9
Carub.0006s0635 Capsella rubella HOM05D007228 ORTHO05D009099 6.8e-146 521.9 668 44.9
ECA247G3190 Erigeron canadensis HOM05D007228 ORTHO05D009099 2.0e-145 520.4 593 48.4
FAN08G0661 Fragaria x ananassa HOM05D007228 ORTHO05D009099 2.0e-145 520.4 655 45.8
C09p69520 Brassica napus HOM05D007228 ORTHO05D009099 9.9e-145 518.1 685 44.4
BolC9t59696H Brassica oleracea HOM05D007228 ORTHO05D009099 9.9e-145 518.1 685 44.4
A10p29130 Brassica napus HOM05D007228 ORTHO05D009099 3.7e-144 516.2 675 44.9
BraA10t44962Z Brassica rapa HOM05D007228 ORTHO05D009099 3.7e-144 516.2 675 44.7
Nn3g16198 Nelumbo nucifera HOM05D007228 ORTHO05D009099 4.6e-142 509.2 596 47.3
PSO017G4664 Papaver somniferum HOM05D007228 ORTHO05D009099 1.0e-141 508.1 758 41.0
PSO478G4831 Papaver somniferum HOM05D007228 ORTHO05D009099 3.9e-141 506.1 787 39.8
Medtr8g095540 Medicago truncatula HOM05D007228 ORTHO05D009099 5.1e-141 505.8 666 44.9
VMungo0251G0919 Vigna mungo HOM05D007228 ORTHO05D009099 1.5e-140 504.2 677 44.2
CSS0045118 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 9.6e-140 501.5 520 51.5
BcaC06g32443 Brassica carinata HOM05D007228 ORTHO05D009099 3.6e-139 499.6 683 43.0
RcHm_v2.0_Chr7g0188261 Rosa chinensis HOM05D007228 ORTHO05D009099 3.8e-136 489.6 595 47.4
Manes.14G042701 Manihot esculenta HOM05D007228 ORTHO05D009099 7.8e-134 481.9 665 43.2
Psat7g040280 Pisum sativum HOM05D007228 ORTHO05D009099 1.3e-133 481.1 666 43.5
THA.LOC104819419 Tarenaya hassleriana HOM05D007228 ORTHO05D009099 1.7e-133 480.7 665 42.3
HanXRQChr08g0229031 Helianthus annuus HOM05D007228 ORTHO05D009099 1.5e-132 477.6 519 50.5
Lj9C489T6 Lonicera japonica HOM05D007228 ORTHO05D009099 2.5e-132 476.9 648 45.5
Phvul.002G279800 Phaseolus vulgaris HOM05D007228 ORTHO05D009099 3.3e-132 476.5 670 43.4
MBI11_g17279_MAGBIO Magnolia biondii HOM05D007228 ORTHO05D009099 1.4e-130 471.1 599 45.9
Sabra15G0131800 Salix brachista HOM05D007228 ORTHO05D009099 3.1e-130 469.9 581 46.3
Sed0011749 Sechium edule HOM05D007228 ORTHO05D009099 5.3e-130 469.2 673 40.9
Lsat_1_v5_gn_1_30460 Lactuca sativa HOM05D007228 ORTHO05D009099 4.2e-127 459.5 593 46.5
Aa31LG3G18990 Aethionema arabicum HOM05D007228 ORTHO05D009099 1.1e-124 451.4 675 40.9
Cfa018687 Carpinus fangiana HOM05D007228 ORTHO05D009099 1.6e-123 447.6 495 49.7
Prupe.5G138400 Prunus persica HOM05D007228 ORTHO05D009099 4.0e-122 443.0 533 47.8
TAR629G1179 Trochodendron aralioides HOM05D007228 ORTHO05D009099 5.8e-121 439.1 471 50.3
ClCG07G006120 Citrullus lanatus HOM05D007228 ORTHO05D009099 2.2e-120 437.2 687 40.2
Thecc.03G143400 Theobroma cacao HOM05D007228 ORTHO05D009099 6.0e-118 429.1 430 52.1
Zm00001eb334150 Zea mays HOM05D007228 ORTHO05D009099 2.3e-117 427.2 700 39.0
ATR0582G376 Amborella trichopoda HOM05D005651 ORTHO05D006877 1.4e-114 417.9 714 38.5
TPR.G12794 Trifolium pratense HOM05D007228 ORTHO05D009099 4.5e-113 412.9 563 44.4
Os01g0103900 Oryza sativa ssp. japonica HOM05D007228 ORTHO05D009099 1.3e-109 401.4 499 44.1
CsaV3_5G013390 Cucumis sativus L. HOM05D007228 ORTHO05D009099 7.4e-108 395.6 732 37.3
EL10Ac5g11261 Beta vulgaris HOM05D007228 ORTHO05D009099 1.6e-107 394.4 687 40.3
Eucgr.E04338 Eucalyptus grandis HOM05D007228 ORTHO05D009099 2.1e-107 394.0 659 39.8
MELO3C018355.2 Cucumis melo HOM05D007228 ORTHO05D009099 1.8e-106 391.0 592 40.7
PGR142G1350 Punica granatum HOM05D007228 ORTHO05D009099 8.4e-104 382.1 718 35.2
unitig_747.g21316 Utricularia gibba HOM05D002839 ORTHO05D003349 7.2e-103 379.0 543 45.1
PGSC0003DMG400014227 Solanum tuberosum HOM05D007228 ORTHO05D009099 1.8e-90 337.8 373 50.7
AUR62036968 Chenopodium quinoa HOM05D007228 ORTHO05D009099 1.2e-89 335.1 687 36.2
Hund02521 Selenicereus undatus HOM05D007228 ORTHO05D009099 3.6e-86 323.6 811 31.7
Sc04g0000080 Simmondsia chinensis HOM05D007228 ORTHO05D009099 9.1e-82 308.9 546 39.4
Sc04g0000120 Simmondsia chinensis HOM05D007228 ORTHO05D009099 1.6e-81 308.1 546 39.4
SEGI_11491 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 3.2e-79 300.4 470 36.6
Ah.02g114480 Amaranthus hybridus HOM05D003541 ORTHO05D004095 6.3e-75 286.2 665 32.9
CSS0001938 Camellia sinensis var. sinensis HOM05D007228 ORTHO05D009099 2.0e-73 281.2 268 55.6
AUR62032199 Chenopodium quinoa HOM05D007228 ORTHO05D009099 1.2e-68 265.4 713 31.8
SMO119G0281 Selaginella moellendorffii HOM05D007228 ORTHO05D009099 2.6e-60 237.7 499 32.1
GSVIVG01035283001 Vitis vinifera HOM05D007228 ORTHO05D009099 4.5e-57 226.9 271 48.7
Lalb_Chr12g0202641 Lupinus albus HOM05D007228 ORTHO05D009099 9.5e-55 219.2 267 45.7
HPP92_021579 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.5e-47 195.3 378 37.0
MSTRG.9383 Avicennia marina HOM05D007228 ORTHO05D009099 9.8e-44 182.6 199 56.8
Lalb_Chr12g0202651 Lupinus albus HOM05D007228 ORTHO05D009099 4.3e-39 167.2 196 44.9
AagrBONN_evm.TU.Sc2ySwM_344.3780 Anthoceros agrestis HOM05D007228 ORTHO05D009099 3.5e-33 147.5 404 29.0
Medtr4g061370 Medicago truncatula HOM05D000876 ORTHO05D000285 2.8e-30 137.9 185 41.1
Psat0s3642g0120 Pisum sativum HOM05D007228 ORTHO05D009099 2.6e-28 131.3 373 30.3
Psat3g128520 Pisum sativum HOM05D007228 ORTHO05D009099 1.9e-26 125.2 372 30.9
AUR62009120 Chenopodium quinoa HOM05D007228 ORTHO05D009099 9.2e-26 122.9 496 27.4
Psat0s5010g0080 Pisum sativum HOM05D005021 ORTHO05D006824 1.6e-25 122.1 172 41.3
HanXRQChr08g0229021 Helianthus annuus HOM05D007228 ORTHO05D009099 5.2e-21 107.1 137 47.4
TPR.G21492 Trifolium pratense HOM05D007228 ORTHO05D009099 7.6e-20 103.2 216 35.2
Psat3g111360 Pisum sativum HOM05D001026 ORTHO05D005232 2.1e-17 95.1 107 46.7
Lalb_Chr12g0202661 Lupinus albus HOM05D007228 ORTHO05D009099 6.2e-14 83.6 138 40.6
Sp6g35490 Schrenkiella parvula HOM05D007228 ORTHO05D009099 5.8e-12 77.0 129 42.6
HPP92_021580 Vanilla planifolia HOM05D007228 ORTHO05D009099 1.1e-10 72.8 151 35.1
CDE06G2808 Ceratophyllum demersum HOM05D007228 ORTHO05D009099 5.4e-10 70.5 500 23.8
Peaxi162Scf00677g00035 Petunia axillaris HOM05D000800 ORTHO05D000658 2.3e-08 65.1 104 36.5
SEGI_40191 Sequoiadendron giganteum HOM05D007228 ORTHO05D009099 9.6e-07 59.7 94 38.3
AL468U10020 Arabidopsis lyrata HOM05D007228 ORTHO05D009099 3.7e-06 57.8 105 37.1


User provided reference genes

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