Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 3.2e-75 285.0 148 100.0
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 7.2e-43 177.6 146 59.6
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 1.2e-42 176.8 146 59.6
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 3.0e-41 172.2 144 59.7
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 8.9e-41 170.6 143 55.9
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 1.5e-40 169.9 144 59.0
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 2.6e-40 169.1 148 55.4
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 3.4e-40 168.7 141 58.2
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 4.4e-40 168.3 143 56.6
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 9.8e-40 167.2 141 58.9
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 2.8e-39 165.6 129 60.5
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 8.3e-39 164.1 123 60.2
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 8.3e-39 164.1 133 58.6
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 1.1e-38 163.7 146 53.4
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 1.4e-38 163.3 143 56.6
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 1.4e-38 163.3 129 58.1
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 1.4e-38 163.3 144 57.6
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 1.8e-38 162.9 151 58.3
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 2.4e-38 162.5 122 63.1
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 2.4e-38 162.5 141 57.4
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 2.4e-38 162.5 141 58.2
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 2.4e-38 162.5 129 58.1
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 3.1e-38 162.2 127 60.6
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 4.1e-38 161.8 139 59.7
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 5.4e-38 161.4 122 59.8
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 5.4e-38 161.4 141 58.2
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 5.4e-38 161.4 141 57.4
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 7.0e-38 161.0 134 58.2
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 9.2e-38 160.6 122 62.3
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 2.0e-37 159.5 143 57.3
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 2.0e-37 159.5 139 56.1
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 2.7e-37 159.1 124 59.7
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 2.7e-37 159.1 143 57.3
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 4.5e-37 158.3 150 56.7
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 4.5e-37 158.3 133 58.6
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 5.9e-37 157.9 143 55.2
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 5.9e-37 157.9 143 53.8
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 7.8e-37 157.5 143 51.7
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 1.0e-36 157.1 124 59.7
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 1.0e-36 157.1 120 61.7
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 1.3e-36 156.8 137 55.5
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 1.7e-36 156.4 144 55.6
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 3.8e-36 155.2 143 55.9
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 3.8e-36 155.2 152 53.3
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 3.8e-36 155.2 120 61.7
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 5.0e-36 154.8 143 53.8
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 5.0e-36 154.8 124 59.7
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 1.1e-35 153.7 125 57.6
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 1.1e-35 153.7 134 53.7
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 2.5e-35 152.5 139 51.1
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 2.5e-35 152.5 141 53.2
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 3.3e-35 152.1 158 52.5
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 3.3e-35 152.1 145 53.1
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 7.3e-35 151.0 122 56.6
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 9.5e-35 150.6 123 58.5
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 9.5e-35 150.6 123 57.7
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 1.2e-34 150.2 127 58.3
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.2e-34 150.2 122 56.6
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 1.6e-34 149.8 123 58.5
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 1.6e-34 149.8 123 58.5
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.6e-34 149.8 147 55.1
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 1.6e-34 149.8 147 55.1
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 2.1e-34 149.4 145 51.7
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 2.1e-34 149.4 136 53.7
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 3.6e-34 148.7 122 56.6
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 4.7e-34 148.3 142 52.8
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 4.7e-34 148.3 146 53.4
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 6.1e-34 147.9 142 52.8
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 6.1e-34 147.9 149 50.3
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 8.0e-34 147.5 144 51.4
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 1.0e-33 147.1 142 52.1
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 1.8e-33 146.4 142 51.4
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 1.8e-33 146.4 140 51.4
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 2.3e-33 146.0 141 52.5
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 4.0e-33 145.2 146 51.4
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 5.2e-33 144.8 122 56.6
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 5.2e-33 144.8 130 52.3
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 6.8e-33 144.4 140 51.4
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 6.8e-33 144.4 128 52.3
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 1.2e-32 143.7 146 50.7
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 1.2e-32 143.7 146 50.7
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 1.2e-32 143.7 146 50.7
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 1.2e-32 143.7 142 50.7
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 1.5e-32 143.3 148 48.6
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.5e-32 143.3 124 54.8
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 2.0e-32 142.9 141 52.5
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 2.0e-32 142.9 157 51.6
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 2.6e-32 142.5 143 51.7
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 4.4e-32 141.7 145 51.0
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 7.5e-32 141.0 145 51.0
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 1.4e-30 136.7 123 52.0
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 5.4e-30 134.8 122 52.5
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 1.2e-29 133.7 141 47.5
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 1.7e-28 129.8 112 55.4
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 9.5e-27 124.0 105 55.2
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 1.6e-26 123.2 107 54.2
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 4.9e-23 111.7 98 53.1
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.1e-22 108.6 162 39.5
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 5.1e-20 101.7 97 52.6
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.7e-15 86.7 83 51.8
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 3.2e-14 82.4 107 35.5
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 8.6e-12 74.3 109 35.8
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 7.3e-11 71.2 82 46.3
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 4.7e-10 68.6 112 36.6
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 6.2e-10 68.2 66 50.0
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 6.8e-09 64.7 107 37.4
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 8.9e-09 64.3 111 34.2
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 1.5e-08 63.5 114 35.1
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 2.0e-08 63.2 54 55.6
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 3.4e-08 62.4 111 34.2
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 3.4e-08 62.4 109 29.4
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 5.8e-08 61.6 107 33.6
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.9e-07 59.3 108 32.4
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 3.8e-07 58.9 58 50.0
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 3.8e-07 58.9 116 31.0
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 8.4e-07 57.8 54 51.9
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 8.4e-07 57.8 113 34.5
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 1.1e-06 57.4 58 50.0
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 1.9e-06 56.6 104 32.7
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 1.9e-06 56.6 110 33.6
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 2.4e-06 56.2 87 36.8
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 2.4e-06 56.2 108 35.2
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 3.2e-06 55.8 106 29.2
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 3.2e-06 55.8 122 28.7
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 3.2e-06 55.8 104 32.7
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 3.2e-06 55.8 107 32.7
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 4.2e-06 55.5 54 53.7
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 5.4e-06 55.1 87 35.6
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 5.4e-06 55.1 107 32.7
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 5.4e-06 55.1 54 53.7
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 5.4e-06 55.1 106 34.9
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 7.1e-06 54.7 53 49.1
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 7.1e-06 54.7 87 35.6
ATR0414G002 Amborella trichopoda HOM05D007363 ORTHO05D009018 9.2e-06 54.3 79 40.5
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 9.2e-06 54.3 70 42.9
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 9.2e-06 54.3 54 48.1
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 9.2e-06 54.3 107 30.8


User provided reference genes

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