Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 3.8e-202 708.0 363 100.0
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 9.2e-124 447.6 364 65.7
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 3.2e-116 422.5 363 63.4
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 5.6e-113 411.8 349 62.8
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 6.2e-112 408.3 365 61.6
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 2.4e-111 406.4 356 58.4
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 1.7e-109 400.2 362 59.4
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.6e-107 393.7 347 59.1
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 3.5e-107 392.5 362 58.0
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 7.8e-107 391.3 362 59.4
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 3.0e-106 389.4 362 59.1
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 5.1e-106 388.7 362 58.6
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 1.9e-105 386.7 369 56.6
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 4.3e-105 385.6 362 57.2
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 9.6e-105 384.4 359 57.9
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 2.8e-104 382.9 359 57.7
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 3.6e-104 382.5 366 56.6
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 6.2e-104 381.7 359 57.7
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 3.1e-103 379.4 361 57.3
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 6.9e-103 378.3 361 57.1
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.2e-102 377.5 341 58.7
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 1.5e-102 377.1 341 58.7
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.0e-102 376.7 341 58.4
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.0e-102 376.7 341 58.4
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 2.0e-102 376.7 341 58.1
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 7.6e-102 374.8 354 56.2
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 8.4e-101 371.3 341 57.8
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 8.4e-101 371.3 346 59.2
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 3.2e-100 369.4 362 53.9
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 2.1e-99 366.7 365 54.0
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 2.7e-99 366.3 367 55.0
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 4.6e-99 365.5 360 53.9
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 4.6e-99 365.5 354 54.0
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 1.0e-98 364.4 364 53.6
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 1.3e-98 364.0 362 54.1
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 3.9e-98 362.5 365 54.2
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 5.1e-98 362.1 354 53.7
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 1.9e-97 360.1 366 54.9
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 1.9e-97 360.1 364 52.5
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 2.5e-97 359.8 355 53.5
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 4.3e-97 359.0 336 56.2
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 2.1e-96 356.7 406 50.7
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 3.6e-96 355.9 363 53.2
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 6.2e-96 355.1 337 56.1
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 6.2e-96 355.1 362 53.9
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.8e-95 353.6 359 52.4
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 1.8e-95 353.6 363 52.9
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 5.3e-95 352.1 363 54.0
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 9.0e-95 351.3 362 50.8
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 3.4e-94 349.4 426 47.7
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 4.5e-94 349.0 338 56.8
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 1.3e-93 347.4 362 52.5
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.7e-93 347.1 362 52.5
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 2.2e-93 346.7 364 51.4
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 2.2e-93 346.7 364 51.6
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 3.8e-93 345.9 407 48.4
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 4.9e-93 345.5 358 51.7
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 6.4e-93 345.1 361 52.4
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 6.4e-93 345.1 356 52.0
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 8.4e-93 344.7 364 52.5
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 1.9e-92 343.6 388 50.0
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 2.4e-92 343.2 355 53.5
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 2.4e-92 343.2 348 53.2
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 4.2e-92 342.4 368 51.1
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 9.3e-92 341.3 353 52.7
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 2.1e-91 340.1 353 53.5
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 1.5e-89 334.0 362 52.5
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 2.5e-89 333.2 363 50.4
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 1.6e-88 330.5 337 52.8
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 4.8e-88 328.9 321 55.8
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 6.2e-88 328.6 340 51.8
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 1.2e-86 324.3 345 51.6
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 9.9e-86 321.2 370 48.6
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 1.3e-85 320.9 304 58.2
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 1.1e-84 317.8 356 48.0
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.9e-84 317.0 357 47.1
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 3.2e-84 316.2 358 50.3
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 5.5e-84 315.5 356 47.5
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 2.1e-83 313.5 347 48.7
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 6.0e-83 312.0 355 47.6
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 7.9e-83 311.6 355 46.8
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.3e-82 310.1 357 47.9
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 6.7e-82 308.5 343 49.0
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 1.9e-81 307.0 357 48.5
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 1.9e-81 307.0 362 49.4
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 4.3e-81 305.8 355 46.2
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 1.3e-80 304.3 362 48.1
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 2.8e-80 303.1 362 46.1
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 8.2e-80 301.6 352 46.3
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 1.4e-79 300.8 300 55.3
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 9.0e-79 298.1 283 57.2
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 5.8e-78 295.4 363 46.8
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 1.7e-77 293.9 366 46.2
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 3.8e-77 292.7 362 47.0
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 1.9e-76 290.4 354 45.2
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 2.5e-76 290.0 298 51.3
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 7.1e-76 288.5 339 46.6
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 9.3e-76 288.1 308 53.6
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.2e-75 287.7 358 44.4
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 2.1e-75 287.0 358 44.4
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 3.5e-75 286.2 352 44.3
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 1.0e-74 284.6 296 52.0
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.8e-74 283.9 328 47.3
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 1.1e-73 281.2 349 44.7
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 4.3e-73 279.3 351 43.9
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 2.2e-72 276.9 355 45.4
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 8.2e-72 275.0 344 43.9
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 5.3e-71 272.3 367 45.2
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 2.0e-65 253.8 350 43.1
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 5.7e-65 252.3 300 49.0
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 9.7e-65 251.5 294 46.9
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 9.1e-63 245.0 356 39.3
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 1.3e-61 241.1 367 39.2
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.8e-55 220.7 350 38.3
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 1.5e-54 217.6 239 51.9
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 1.5e-54 217.6 235 54.9
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 2.0e-54 217.2 335 37.9
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 6.5e-53 212.2 338 38.8
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 8.5e-53 211.8 331 39.0
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 4.2e-52 209.5 344 39.0
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 5.2e-50 202.6 238 47.1
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 5.7e-49 199.1 275 43.6
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 1.0e-45 188.3 243 46.9
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 1.7e-45 187.6 230 45.7
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 3.6e-43 179.9 276 42.8
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 4.7e-43 179.5 278 38.5
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 1.6e-38 164.5 298 37.2
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 1.7e-37 161.0 341 32.8
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 9.4e-36 155.2 127 63.0
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 1.4e-34 151.4 242 43.0
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 5.2e-34 149.4 425 27.3
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 8.6e-29 132.1 125 49.6
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 2.1e-27 127.5 184 40.8
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 4.4e-25 119.8 151 51.0
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 5.4e-23 112.8 371 28.6
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 8.0e-19 99.0 251 29.9
MSTRG.15906 Avicennia marina HOM05D005473 ORTHO05D006543 8.3e-16 89.0 56 76.8
MD13G1032300 Malus domestica HOM05D005473 ORTHO05D006543 3.9e-13 80.1 55 67.3
MD16G1034500 Malus domestica HOM05D005473 ORTHO05D006543 9.5e-12 75.5 55 63.6
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 1.4e-10 71.6 147 34.7
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 1.8e-10 71.2 307 24.4
AagrBONN_evm.TU.Sc2ySwM_117.2697 Anthoceros agrestis HOM05D005473 ORTHO05D006543 4.0e-10 70.1 201 29.4


User provided reference genes

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