Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 1.6e-126 456.1 224 100.0
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 2.6e-113 412.1 225 89.8
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 9.4e-111 403.7 225 88.0
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 1.8e-106 389.4 225 85.3
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 7.0e-106 387.5 226 85.8
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 2.0e-105 386.0 225 83.1
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 2.7e-105 385.6 223 83.0
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 3.5e-105 385.2 225 83.1
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 1.7e-104 382.9 225 82.2
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 5.0e-104 381.3 225 80.9
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 8.5e-104 380.6 225 81.8
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 4.2e-103 378.3 225 80.9
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 4.2e-103 378.3 225 80.9
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 1.2e-102 376.7 225 82.2
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 2.1e-102 375.9 225 80.0
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 3.0e-101 372.1 225 80.0
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.0e-101 371.7 226 81.0
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.0e-101 371.7 226 81.0
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 1.2e-100 370.2 225 80.0
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 1.5e-100 369.8 225 80.4
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 3.4e-100 368.6 225 81.3
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 5.7e-100 367.9 225 78.2
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 1.7e-99 366.3 225 81.8
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 2.8e-99 365.5 225 79.1
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 6.3e-99 364.4 225 78.2
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 6.3e-99 364.4 224 79.9
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 1.4e-98 363.2 224 77.2
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 2.4e-98 362.5 225 76.9
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 4.1e-98 361.7 225 76.9
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 7.0e-98 360.9 225 78.2
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 1.6e-97 359.8 224 77.2
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 2.0e-97 359.4 225 77.8
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 2.7e-97 359.0 225 76.0
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 4.5e-97 358.2 225 76.9
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 4.5e-97 358.2 225 76.4
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 4.5e-97 358.2 225 76.4
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 5.9e-97 357.8 226 76.1
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 7.7e-97 357.5 225 75.6
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 1.0e-96 357.1 225 75.6
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.3e-96 356.7 224 76.8
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 1.7e-96 356.3 225 76.0
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.7e-96 356.3 225 77.3
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 2.9e-96 355.5 225 76.4
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 3.8e-96 355.1 225 76.9
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 8.5e-96 354.0 225 75.6
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 8.5e-96 354.0 225 75.1
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 8.5e-96 354.0 224 76.3
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 1.1e-95 353.6 225 75.6
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 1.5e-95 353.2 225 76.4
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 1.5e-95 353.2 225 76.9
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 1.9e-95 352.8 224 75.9
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 1.9e-95 352.8 266 69.2
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 1.9e-95 352.8 225 75.6
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 7.2e-95 350.9 224 75.9
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 9.4e-95 350.5 225 74.2
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 3.6e-94 348.6 225 76.9
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 6.1e-94 347.8 227 74.9
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 8.0e-94 347.4 225 74.7
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 1.8e-93 346.3 225 75.6
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 2.3e-93 345.9 226 75.7
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 4.4e-92 341.7 279 63.1
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 9.8e-92 340.5 225 72.0
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 3.7e-91 338.6 225 73.3
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 4.9e-91 338.2 225 71.6
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 2.4e-90 335.9 225 72.9
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 2.4e-90 335.9 224 72.8
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 3.1e-90 335.5 225 72.9
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 4.1e-90 335.1 225 72.4
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 3.5e-89 332.0 260 65.4
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 4.5e-89 331.6 196 81.6
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 5.0e-88 328.2 225 71.6
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 5.0e-88 328.2 227 71.8
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 5.0e-88 328.2 225 71.1
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 8.6e-88 327.4 225 71.1
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 8.6e-88 327.4 228 71.9
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 1.1e-87 327.0 225 71.1
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 1.5e-87 326.6 225 71.1
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 1.5e-87 326.6 225 71.1
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 1.9e-87 326.2 196 80.6
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 2.5e-87 325.9 225 71.1
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 2.5e-87 325.9 225 71.1
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 4.3e-87 325.1 225 70.7
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 5.6e-87 324.7 225 71.6
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 7.3e-87 324.3 225 70.2
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 7.3e-87 324.3 225 69.8
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 7.3e-87 324.3 208 76.0
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 1.2e-86 323.6 225 71.1
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 2.8e-86 322.4 225 71.1
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 2.8e-86 322.4 225 70.2
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 4.7e-86 321.6 217 72.8
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 1.5e-84 316.6 232 67.7
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 2.0e-84 316.2 225 70.2
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 4.9e-83 311.6 226 69.5
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 1.2e-81 307.0 225 68.4
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 1.0e-80 303.9 225 66.7
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 1.7e-80 303.1 228 66.2
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 3.9e-80 302.0 224 66.1
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 3.9e-80 302.0 225 67.6
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 3.9e-80 302.0 225 70.2
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 6.6e-80 301.2 225 68.0
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 1.1e-79 300.4 227 66.1
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 1.9e-79 299.7 227 66.5
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 3.3e-79 298.9 225 65.8
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 9.5e-79 297.4 225 65.8
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 1.4e-77 293.5 225 64.0
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 8.9e-77 290.8 177 77.4
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 3.4e-76 288.9 225 65.8
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 5.8e-76 288.1 226 63.3
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 1.3e-72 276.9 225 60.4
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 2.3e-72 276.2 227 61.7
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.1e-71 273.9 252 60.7
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.1e-71 273.9 252 60.7
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 3.1e-69 265.8 225 63.1
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 4.0e-69 265.4 225 61.3
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 1.7e-67 260.0 210 60.0
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 5.4e-66 255.0 174 71.3
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 3.3e-63 245.7 229 59.4
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 3.6e-62 242.3 245 53.9
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 1.4e-61 240.4 248 54.4
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 3.4e-60 235.7 225 52.9
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 2.8e-54 216.1 225 50.2
C02p06000 Brassica napus HOM05D004972 ORTHO05D006309 1.2e-52 210.7 164 64.0
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 1.2e-52 210.7 224 48.2
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 2.7e-49 199.5 225 47.1
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.1e-45 187.6 122 70.5
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 4.4e-44 182.2 227 43.6
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 1.9e-42 176.8 224 42.0
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 6.0e-41 171.8 233 44.6
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 3.1e-37 159.5 130 63.1
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 5.8e-36 155.2 207 46.4
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.2e-35 153.3 100 72.0
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 6.4e-35 151.8 100 71.0
Pp3c7_4620 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.2e-33 147.5 150 53.3
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 3.0e-24 116.3 71 70.4
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 5.9e-20 102.1 105 54.3
CSS0010746 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.0e-19 101.3 51 90.2
CSS0040756 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.0e-19 101.3 51 90.2
CSS0044245 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.2e-19 100.1 51 90.2
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 3.8e-19 99.4 65 63.1
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 6.5e-19 98.6 51 90.2
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 3.2e-18 96.3 122 49.2
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 5.5e-18 95.5 79 62.0
CDE02G3434 Ceratophyllum demersum HOM05D004972 ORTHO05D000215 2.7e-17 93.2 99 53.5
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 1.9e-15 87.0 81 54.3
CSS0013064 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.1e-13 79.3 51 80.4
Cfa026650 Carpinus fangiana HOM05D004972 ORTHO05D006309 9.0e-13 78.2 223 31.4
SEGI_16480 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 1.5e-12 77.4 51 72.5
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 5.5e-10 68.9 51 66.7
Gohir.D11G085800 Gossypium hirsutum HOM05D001136 ORTHO05D011526 1.2e-09 67.8 41 73.2
SHI16326 Sapria himalayana HOM05D004972 ORTHO05D006309 1.0e-08 64.7 60 55.0


User provided reference genes

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