Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18516 Striga asiatica HOM05D009707 ORTHO05D012008 1.1e-72 276.6 138 100.0
SGA_v2.0_scaffold380G50359 Striga asiatica HOM05D009707 ORTHO05D010215 7.0e-16 87.8 158 32.3
SGA_v2.0_scaffold19G08712 Striga asiatica HOM05D009707 ORTHO05D010215 1.7e-14 83.2 158 32.3
SGA_v2.0_scaffold102G29874 Striga asiatica HOM05D009707 ORTHO05D000277 3.3e-13 79.0 185 27.6
SGA_v2.0_scaffold3145G54282 Striga asiatica HOM05D009666 ORTHO05D000277 3.3e-13 79.0 193 28.5
SGA_v2.0_scaffold123G33397 Striga asiatica HOM05D000034 ORTHO05D000277 2.8e-12 75.9 195 29.7
SGA_v2.0_scaffold221G42759 Striga asiatica HOM05D009666 ORTHO05D000277 2.8e-12 75.9 193 27.5
SGA_v2.0_scaffold19G08868 Striga asiatica HOM05D009707 ORTHO05D010215 3.6e-12 75.5 185 27.0
SGA_v2.0_scaffold235G43663 Striga asiatica HOM05D009666 ORTHO05D000277 8.9e-11 70.9 187 27.3
Actinidia03627 Actinidia chinensis HOM05D000034 ORTHO05D000277 2.0e-10 69.7 132 29.5
vmacro08892 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 3.4e-10 68.9 141 29.8
vmacro07718 Vaccinium macrocarpon HOM05D000034 ORTHO05D000277 6.4e-09 64.7 166 27.1
SGA_v2.0_scaffold464G52000 Striga asiatica HOM05D000034 ORTHO05D000037 1.1e-08 63.9 172 26.7
RhsimUnG0197200 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.9e-08 63.2 167 22.8
Rhsim07G0014400 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.2e-08 62.4 171 22.8
Rhsim05G0045400 Rhododendron simsii HOM05D000034 ORTHO05D000277 9.2e-08 60.8 171 23.4
SGA_v2.0_scaffold3G01632 Striga asiatica HOM05D009666 ORTHO05D000277 9.2e-08 60.8 183 23.5
Rhsim03G0108500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.6e-07 60.1 166 22.9
Rhsim02G0154600 Rhododendron simsii HOM05D000034 ORTHO05D000277 2.1e-07 59.7 171 22.2
SGA_v2.0_scaffold26G11283 Striga asiatica HOM05D009666 ORTHO05D000277 2.7e-07 59.3 168 24.4
SalBow5G4067 Salvia bowleyana HOM05D009908 ORTHO05D012008 4.6e-07 58.5 61 45.9
Rhsim02G0247200 Rhododendron simsii HOM05D000034 ORTHO05D000277 6.0e-07 58.2 168 21.4
SGA_v2.0_scaffold6G03411 Striga asiatica HOM05D000034 ORTHO05D000277 7.8e-07 57.8 69 40.6
SGA_v2.0_scaffold258G45776 Striga asiatica HOM05D012189 ORTHO05D000277 1.0e-06 57.4 184 23.9
SGA_v2.0_scaffold27G11629 Striga asiatica HOM05D009707 ORTHO05D010215 1.0e-06 57.4 143 27.3
Rhsim10G0022500 Rhododendron simsii HOM05D000034 ORTHO05D000277 1.3e-06 57.0 166 24.7
SGA_v2.0_scaffold113G31702 Striga asiatica HOM05D012189 ORTHO05D000277 1.3e-06 57.0 182 23.6
Hma1.2p1_0084F.1_g043280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-06 56.6 143 29.4
Dinv36440 Davidia involucrata HOM05D012673 ORTHO05D000277 3.0e-06 55.8 127 29.9
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.0e-06 55.8 176 27.3
Rhsim02G0144500 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.9e-06 55.5 172 23.3
SGA_v2.0_scaffold105G30384 Striga asiatica HOM05D000034 ORTHO05D000277 3.9e-06 55.5 50 46.0
SGA_v2.0_scaffold214G42275 Striga asiatica HOM05D009707 ORTHO05D010215 3.9e-06 55.5 73 37.0
Actinidia34500 Actinidia chinensis HOM05D002514 ORTHO05D002761 5.1e-06 55.1 133 26.3
Hma1.2p1_2228F.1_g317520 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.6e-06 54.3 146 28.8


User provided reference genes

Program Settings