Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18512 Striga asiatica HOM05D006942 ORTHO05D008737 1.6e-144 516.2 271 100.0
MSTRG.19939 Avicennia marina HOM05D006942 ORTHO05D008737 2.5e-102 375.9 280 69.3
Migut.J01895 Erythranthe guttata HOM05D006942 ORTHO05D008737 1.2e-91 340.5 189 86.8
CsaV3_3G043400 Cucumis sativus L. HOM05D006942 ORTHO05D008737 5.9e-91 338.2 277 63.5
MELO3C026901.2 Cucumis melo HOM05D006942 ORTHO05D008737 1.3e-90 337.0 277 64.3
Atru.chr2.1323 Acer truncatum HOM05D006942 ORTHO05D008737 1.4e-89 333.6 279 62.4
MD12G1002500 Malus domestica HOM05D006942 ORTHO05D008737 1.4e-89 333.6 181 86.2
GSVIVG01033386001 Vitis vinifera HOM05D006942 ORTHO05D008737 1.4e-89 333.6 181 86.7
ClCG10G013230 Citrullus lanatus HOM05D006942 ORTHO05D008737 1.9e-89 333.2 277 62.1
FvH4_3g25250 Fragaria vesca HOM05D006942 ORTHO05D008737 3.2e-89 332.4 188 82.4
FAN21G2944 Fragaria x ananassa HOM05D006942 ORTHO05D008737 3.2e-89 332.4 188 82.4
Sed0013150 Sechium edule HOM05D006942 ORTHO05D008737 3.2e-89 332.4 283 61.5
Potri.013G059500 Populus trichocarpa HOM05D006942 ORTHO05D008737 4.2e-89 332.0 189 83.6
Gohir.D13G109500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 5.5e-89 331.6 279 61.3
RcHm_v2.0_Chr5g0046891 Rosa chinensis HOM05D006942 ORTHO05D008737 5.5e-89 331.6 184 84.8
Rhsim04G0087000 Rhododendron simsii HOM05D006942 ORTHO05D008737 7.2e-89 331.3 272 61.8
Gorai.013G123100 Gossypium raimondii HOM05D006942 ORTHO05D008737 2.1e-88 329.7 190 80.5
QL07p020181 Quercus lobata HOM05D006942 ORTHO05D008737 2.1e-88 329.7 192 81.8
vmacro09146 Vaccinium macrocarpon HOM05D006942 ORTHO05D008737 2.1e-88 329.7 272 63.2
Manes.08G149200 Manihot esculenta HOM05D006942 ORTHO05D008737 2.7e-88 329.3 273 63.7
TAR633G0669 Trochodendron aralioides HOM05D006942 ORTHO05D008737 2.7e-88 329.3 184 84.8
FAN16G3006 Fragaria x ananassa HOM05D006942 ORTHO05D008737 3.6e-88 328.9 196 79.1
COL.COLO4_13617 Corchorus olitorius HOM05D006942 ORTHO05D008737 4.7e-88 328.6 190 81.1
Thecc.05G293100 Theobroma cacao HOM05D006942 ORTHO05D008737 4.7e-88 328.6 277 62.1
PSO339G1210 Papaver somniferum HOM05D006942 ORTHO05D008737 6.1e-88 328.2 192 80.7
MBI11_g05460_MAGBIO Magnolia biondii HOM05D006942 ORTHO05D008737 7.9e-88 327.8 185 82.2
PGR042G3330 Punica granatum HOM05D006942 ORTHO05D008737 1.0e-87 327.4 278 60.8
DCAR_019882 Daucus carota HOM05D006942 ORTHO05D008737 8.8e-87 324.3 191 79.6
Cc00_g08890 Coffea canephora HOM05D006942 ORTHO05D008737 1.1e-86 323.9 200 78.5
Duzib177G1195 Durio zibethinus HOM05D006942 ORTHO05D008737 1.5e-86 323.6 190 80.0
Nn7g35832 Nelumbo nucifera HOM05D006942 ORTHO05D008737 2.0e-86 323.2 185 80.5
Eucgr.A02087 Eucalyptus grandis HOM05D006942 ORTHO05D008737 3.3e-86 322.4 179 83.2
SpUn0001_1050 Schrenkiella parvula HOM05D006942 ORTHO05D008737 3.3e-86 322.4 187 78.6
TWI34G0045 Tripterygium wilfordii HOM05D006942 ORTHO05D008737 3.3e-86 322.4 188 81.4
Peaxi162Scf00076g01036 Petunia axillaris HOM05D006942 ORTHO05D008737 5.7e-86 321.6 300 57.3
Sed0025081 Sechium edule HOM05D006942 ORTHO05D008737 7.4e-86 321.2 193 79.3
DCAR_009675 Daucus carota HOM05D006942 ORTHO05D008737 9.7e-86 320.9 191 79.1
THA.LOC104823787 Tarenaya hassleriana HOM05D006942 ORTHO05D008737 1.3e-85 320.5 189 78.8
Gohir.A13G105500 Gossypium hirsutum HOM05D006942 ORTHO05D008737 2.8e-85 319.3 189 78.3
Cpa.g.sc51.94 Carica papaya HOM05D006942 ORTHO05D008737 4.8e-85 318.5 289 59.2
BcaC04g22009 Brassica carinata HOM05D006942 ORTHO05D008737 8.2e-85 317.8 187 77.5
A09p19530 Brassica napus HOM05D006942 ORTHO05D008737 8.2e-85 317.8 187 77.5
C09p24900 Brassica napus HOM05D006942 ORTHO05D008737 8.2e-85 317.8 187 77.5
BolC9t55381H Brassica oleracea HOM05D006942 ORTHO05D008737 8.2e-85 317.8 187 77.5
Sabra19G0041400 Salix brachista HOM05D006942 ORTHO05D008737 8.2e-85 317.8 270 63.0
BcaB07g31088 Brassica carinata HOM05D006942 ORTHO05D008737 1.8e-84 316.6 187 76.5
CARHR028870 Cardamine hirsuta HOM05D006942 ORTHO05D008737 1.8e-84 316.6 187 78.1
AL1G64670 Arabidopsis lyrata HOM05D006942 ORTHO05D008737 2.4e-84 316.2 189 76.2
ATR0697G165 Amborella trichopoda HOM05D006942 ORTHO05D008737 3.1e-84 315.8 190 77.9
Carub.0002s0962 Capsella rubella HOM05D006942 ORTHO05D008737 3.1e-84 315.8 196 75.0
Gorai.007G287900 Gossypium raimondii HOM05D006942 ORTHO05D008737 4.1e-84 315.5 191 77.5
CANSAT78G1082 Cannabis sativa HOM05D006942 ORTHO05D008737 5.3e-84 315.1 183 81.4
Lalb_Chr24g0403081 Lupinus albus HOM05D006942 ORTHO05D008737 5.3e-84 315.1 279 61.3
Ciclev10021582m.g Citrus clementina HOM05D006942 ORTHO05D008737 7.0e-84 314.7 183 79.8
ECA233G4155 Erigeron canadensis HOM05D006942 ORTHO05D008737 1.2e-83 313.9 183 81.4
arahy.Tifrunner.gnm1.ann1.0W916P Arachis hypogaea HOM05D006942 ORTHO05D008737 3.4e-83 312.4 193 78.2
Glyma.16G042200 Glycine max HOM05D006942 ORTHO05D008737 4.5e-83 312.0 280 59.3
Nn2g15884 Nelumbo nucifera HOM05D002140 ORTHO05D008737 5.9e-83 311.6 195 73.8
AT2G23840 Arabidopsis thaliana HOM05D006942 ORTHO05D008737 1.0e-82 310.8 186 76.3
HanXRQChr13g0398101 Helianthus annuus HOM05D006942 ORTHO05D008737 1.3e-82 310.5 183 80.3
Aqoxy2G00557 Aquilegia oxysepala HOM05D006942 ORTHO05D008737 1.7e-82 310.1 282 58.2
Lj1g0019871 Lotus japonicus HOM05D006942 ORTHO05D008737 1.7e-82 310.1 196 75.5
Eucgr.K01480 Eucalyptus grandis HOM05D006942 ORTHO05D008737 2.2e-82 309.7 187 77.5
Glyma.19G110300 Glycine max HOM05D006942 ORTHO05D008737 1.1e-81 307.4 289 56.4
VMungo1383G0897 Vigna mungo HOM05D006942 ORTHO05D008737 1.1e-81 307.4 184 78.8
Phvul.001G109600 Phaseolus vulgaris HOM05D006942 ORTHO05D008737 1.4e-81 307.0 184 78.8
Medtr7g085420 Medicago truncatula HOM05D006942 ORTHO05D008737 2.5e-81 306.2 186 78.5
CDE10G0368 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 3.2e-81 305.8 184 76.1
Thhalv10008350m.g Eutrema salsugineum HOM05D006942 ORTHO05D008737 5.5e-81 305.1 179 77.7
Lsat_1_v5_gn_6_36781 Lactuca sativa HOM05D006942 ORTHO05D008737 7.2e-81 304.7 179 79.3
Psat3g089160 Pisum sativum HOM05D006942 ORTHO05D008737 3.6e-80 302.4 196 74.5
TPR.G5873 Trifolium pratense HOM05D006942 ORTHO05D008737 1.8e-79 300.1 182 76.9
Haze_19409 Corylus avellana HOM05D006942 ORTHO05D008737 6.7e-79 298.1 314 53.2
HPP92_018642 Vanilla planifolia HOM05D006942 ORTHO05D008737 6.7e-79 298.1 186 72.6
Aa31LG2G1990 Aethionema arabicum HOM05D006942 ORTHO05D008737 2.8e-77 292.7 208 68.3
TAR623G0107 Trochodendron aralioides HOM05D002140 ORTHO05D002382 8.2e-77 291.2 164 82.3
CDE06G2457 Ceratophyllum demersum HOM05D006942 ORTHO05D008737 1.6e-75 287.0 195 70.3
EL10Ac3g06808 Beta vulgaris HOM05D006942 ORTHO05D008737 1.3e-74 283.9 235 61.7
PGR142G1268 Punica granatum HOM05D006942 ORTHO05D008737 1.7e-74 283.5 279 54.8
Lalb_Chr06g0173931 Lupinus albus HOM05D006942 ORTHO05D008737 2.2e-74 283.1 221 65.6
Os07g0170200 Oryza sativa ssp. japonica HOM05D006942 ORTHO05D008737 3.6e-72 275.8 163 77.3
Prupe.7G002400 Prunus persica HOM05D006942 ORTHO05D008737 1.2e-70 270.8 158 81.0
CiPaw.09G001300 Carya illinoinensis HOM05D006942 ORTHO05D008737 4.4e-70 268.9 149 84.6
Sabra13G0052800 Salix brachista HOM05D006942 ORTHO05D008737 2.8e-69 266.2 154 82.5
Lj2A357G77 Lonicera japonica HOM05D006942 ORTHO05D008737 3.1e-68 262.7 149 83.2
CSS0046453 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 4.1e-68 262.3 281 53.7
AUR62032674 Chenopodium quinoa HOM05D006942 ORTHO05D008737 7.0e-68 261.5 170 71.2
Actinidia38618 Actinidia chinensis HOM05D006942 ORTHO05D008737 8.5e-66 254.6 172 71.5
Gohir.D11G268200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.5e-65 253.8 191 64.9
Sc13g0007650 Simmondsia chinensis HOM05D006942 ORTHO05D008737 1.6e-64 250.4 165 73.9
Ca_08258_v3 Cicer arietinum L. HOM05D006942 ORTHO05D008737 2.8e-61 239.6 148 77.0
AUR62032073 Chenopodium quinoa HOM05D006942 ORTHO05D008737 2.9e-58 229.6 164 66.5
Manes.09G142700 Manihot esculenta HOM05D006942 ORTHO05D008737 2.8e-56 223.0 127 82.7
Pp3c12_13900 Physcomitrium patens HOM05D006942 ORTHO05D008737 8.9e-55 218.0 194 53.1
AagrBONN_evm.TU.Sc2ySwM_344.2088 Anthoceros agrestis HOM05D006942 ORTHO05D008737 1.2e-54 217.6 193 53.4
Mapoly0043s0076 Marchantia polymorpha HOM05D006942 ORTHO05D008737 3.4e-54 216.1 188 51.6
Pp3c4_7620 Physcomitrium patens HOM05D006942 ORTHO05D008737 5.7e-54 215.3 194 54.1
arahy.Tifrunner.gnm1.ann1.T4HPZA Arachis hypogaea HOM05D006942 ORTHO05D008737 6.3e-53 211.8 193 59.6
unitig_85.g27430 Utricularia gibba HOM05D006942 ORTHO05D008737 6.3e-53 211.8 235 53.2
Nitab4.5_0000911g0030 Nicotiana tabacum HOM05D006942 ORTHO05D008737 7.0e-52 208.4 121 81.0
SMO364G0530 Selaginella moellendorffii HOM05D006942 ORTHO05D008737 1.1e-49 201.1 181 50.3
Duzib128G0620 Durio zibethinus HOM05D006942 ORTHO05D008737 1.9e-49 200.3 240 47.5
Ah.04g153240 Amaranthus hybridus HOM05D000653 ORTHO05D003117 1.5e-46 190.7 178 57.9
Oeu048436.1 Olea europaea HOM05D006942 ORTHO05D008737 2.6e-46 189.9 190 56.8
Potri.019G033200 Populus trichocarpa HOM05D006942 ORTHO05D008737 1.8e-39 167.2 272 41.9
Hund24842 Selenicereus undatus HOM05D006942 ORTHO05D008737 1.5e-38 164.1 241 40.7
Actinidia17307 Actinidia chinensis HOM05D006942 ORTHO05D008737 2.0e-38 163.7 105 73.3
CBR_g603 Chara braunii HOM05D006942 ORTHO05D008737 2.6e-38 163.3 205 43.4
SalBow2G1960 Salvia bowleyana HOM05D006942 ORTHO05D008737 1.1e-36 157.9 91 78.0
Gohir.A11G258200 Gossypium hirsutum HOM05D006942 ORTHO05D008737 1.6e-35 154.1 92 75.0
PRCOL_00006758 Prasinoderma coloniale HOM05D006942 ORTHO05D008737 7.8e-35 151.8 180 42.8
Cre04.g217903 Chlamydomonas reinhardtii HOM05D006942 ORTHO05D008737 3.6e-32 142.9 176 40.3
SEGI_36650 Sequoiadendron giganteum HOM05D006942 ORTHO05D008737 5.8e-22 109.0 74 68.9
Zm00001eb300960 Zea mays HOM05D006942 ORTHO05D008737 1.1e-09 68.2 41 73.2
Pp3s30_1160 Physcomitrium patens HOM05D006942 ORTHO05D317230 3.1e-07 60.1 62 38.7
CSS0026826 Camellia sinensis var. sinensis HOM05D006942 ORTHO05D008737 5.3e-07 59.3 50 56.0


User provided reference genes

Program Settings