Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18510 Striga asiatica HOM05D029849 ORTHO05D011912 4.9e-80 301.6 218 100.0
SGA_v2.0_scaffold266G46147 Striga asiatica HOM05D029849 ORTHO05D011912 4.2e-71 271.9 218 84.9
SGA_v2.0_scaffold74G24554 Striga asiatica HOM05D029849 ORTHO05D011912 6.2e-51 204.9 218 83.0
SGA_v2.0_scaffold3G01620 Striga asiatica HOM05D018395 ORTHO05D011912 5.2e-21 105.5 94 53.2
SGA_v2.0_scaffold295G47490 Striga asiatica HOM05D029849 ORTHO05D011912 8.8e-21 104.8 211 43.1
SGA_v2.0_scaffold11G05582 Striga asiatica HOM05D018166 ORTHO05D011912 9.7e-20 101.3 100 50.0
SGA_v2.0_scaffold147G36332 Striga asiatica HOM05D013095 ORTHO05D011912 4.5e-17 92.4 103 47.6
SGA_v2.0_scaffold85G26590 Striga asiatica HOM05D013095 ORTHO05D011912 4.5e-17 92.4 103 47.6
SGA_v2.0_scaffold21G09368 Striga asiatica HOM05D018166 ORTHO05D011912 5.0e-16 89.0 111 41.4
SGA_v2.0_scaffold25G11032 Striga asiatica HOM05D018612 ORTHO05D011912 6.5e-16 88.6 104 48.1
SGA_v2.0_scaffold139G35420 Striga asiatica HOM05D018395 ORTHO05D011912 1.1e-15 87.8 60 68.3
SGA_v2.0_scaffold14G06988 Striga asiatica HOM05D018395 ORTHO05D011912 1.1e-15 87.8 60 68.3
SGA_v2.0_scaffold223G42854 Striga asiatica HOM05D018395 ORTHO05D011912 1.1e-15 87.8 60 68.3
SGA_v2.0_scaffold22G09774 Striga asiatica HOM05D018395 ORTHO05D011912 1.1e-15 87.8 60 68.3
SGA_v2.0_scaffold332G48976 Striga asiatica HOM05D018395 ORTHO05D011912 1.1e-15 87.8 60 68.3
SGA_v2.0_scaffold99G29481 Striga asiatica HOM05D018166 ORTHO05D011912 1.9e-15 87.0 111 40.5
SGA_v2.0_scaffold355G49765 Striga asiatica HOM05D013095 ORTHO05D011912 2.5e-15 86.7 89 49.4
SGA_v2.0_scaffold96G29033 Striga asiatica HOM05D018166 ORTHO05D011912 9.4e-15 84.7 111 40.5
SGA_v2.0_scaffold117G32327 Striga asiatica HOM05D018166 ORTHO05D011912 2.7e-14 83.2 111 38.7
SGA_v2.0_scaffold85G26669 Striga asiatica HOM05D018166 ORTHO05D011912 1.0e-13 81.3 122 38.5
SGA_v2.0_scaffold6G03468 Striga asiatica HOM05D018395 ORTHO05D011912 4.0e-13 79.3 77 53.2
SGA_v2.0_scaffold211G42115 Striga asiatica HOM05D018612 ORTHO05D011912 1.7e-11 73.9 91 40.7
SGA_v2.0_scaffold223G42819 Striga asiatica HOM05D018612 ORTHO05D011912 2.2e-11 73.6 91 40.7
SGA_v2.0_scaffold158G37502 Striga asiatica HOM05D018612 ORTHO05D011912 2.8e-11 73.2 91 40.7
SGA_v2.0_scaffold5187G54608 Striga asiatica HOM05D018612 ORTHO05D011912 6.3e-11 72.0 60 51.7
SGA_v2.0_scaffold279G46774 Striga asiatica HOM05D018612 ORTHO05D011912 1.4e-10 70.9 60 50.0
SalBow6G4476 Salvia bowleyana HOM05D010847 ORTHO05D009453 3.1e-10 69.7 95 42.1
SalBow5G3908 Salvia bowleyana HOM05D010847 ORTHO05D009453 9.1e-10 68.2 95 41.1
SalBow8G5012 Salvia bowleyana HOM05D010847 ORTHO05D009453 9.1e-10 68.2 95 41.1
Peaxi162Scf00013g01517 Petunia axillaris HOM05D001883 ORTHO05D002184 2.0e-09 67.0 110 38.2
SalBow8G5279 Salvia bowleyana HOM05D010847 ORTHO05D009453 2.7e-09 66.6 95 40.0
SGA_v2.0_scaffold136G35019 Striga asiatica HOM05D018612 ORTHO05D011912 4.5e-09 65.9 91 39.6
SalBow5G4834 Salvia bowleyana HOM05D058812 ORTHO05D009453 5.9e-09 65.5 79 38.0
SalBow8G4103 Salvia bowleyana HOM05D008808 ORTHO05D009453 1.3e-08 64.3 106 34.0
SalBow5G2011 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.9e-08 63.2 75 44.0
SGA_v2.0_scaffold470G52074 Striga asiatica HOM05D013095 ORTHO05D399408 3.8e-08 62.8 62 48.4
Nitab4.5_0003471g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.9e-07 60.5 104 33.7
SalBow6G6190 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.5e-07 60.1 103 35.0
CAN.G1512.5 Capsicum annuum HOM05D008741 ORTHO05D010787 3.2e-07 59.7 90 35.6
SalBow7G0742 Salvia bowleyana HOM05D008808 ORTHO05D009453 3.2e-07 59.7 101 34.7
Nitab4.5_0006171g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.2e-07 59.3 61 44.3
SalBow1G0840 Salvia bowleyana HOM05D009427 ORTHO05D009453 4.2e-07 59.3 112 36.6
SalBow1G4300 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.2e-07 59.3 106 34.0
SalBow5G5058 Salvia bowleyana HOM05D008808 ORTHO05D009453 4.2e-07 59.3 57 45.6
PGSC0003DMG400012467 Solanum tuberosum HOM05D008741 ORTHO05D010787 7.2e-07 58.5 76 39.5
SalBow6G3025 Salvia bowleyana HOM05D058812 ORTHO05D009453 9.4e-07 58.2 80 35.0
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.2e-06 57.8 88 36.4
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.2e-06 57.8 88 35.2
Nitab4.5_0001487g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.2e-06 57.8 110 33.6
SalBow3G3378 Salvia bowleyana HOM05D000162 ORTHO05D000090 1.2e-06 57.8 109 31.2
Nitab4.5_0007255g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.6e-06 57.4 87 35.6
Nitab4.5_0011837g0030 Nicotiana tabacum HOM05D001883 ORTHO05D002184 1.6e-06 57.4 54 46.3
Potri.009G094001 Populus trichocarpa HOM05D010572 ORTHO05D012753 1.6e-06 57.4 99 33.3
SalBow5G4375 Salvia bowleyana HOM05D010847 ORTHO05D009453 1.6e-06 57.4 95 36.8
SalBow6G1533 Salvia bowleyana HOM05D010847 ORTHO05D009453 1.6e-06 57.4 118 30.5
SalBow8G3756 Salvia bowleyana HOM05D010847 ORTHO05D009453 1.6e-06 57.4 95 36.8
PGSC0003DMG400039121 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.6e-06 57.4 67 41.8
Nitab4.5_0001238g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.1e-06 57.0 105 36.2
Nitab4.5_0009994g0010 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.1e-06 57.0 90 34.4
SalBow7G0033 Salvia bowleyana HOM05D008808 ORTHO05D009453 2.1e-06 57.0 70 38.6
Nn4g22099 Nelumbo nucifera HOM05D007742 ORTHO05D004072 2.7e-06 56.6 34 64.7
Nitab4.5_0000341g0050 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.7e-06 56.6 75 38.7
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 3.6e-06 56.2 98 38.8
ECA238G3814 Erigeron canadensis HOM05D012511 ORTHO05D013076 3.6e-06 56.2 71 42.3
Nitab4.5_0001326g0100 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.6e-06 56.2 71 39.4
Nitab4.5_0002500g0060 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.6e-06 56.2 98 32.7
Nitab4.5_0005946g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.6e-06 56.2 89 40.4
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 3.6e-06 56.2 72 38.9
SalBow1G1071 Salvia bowleyana HOM05D010847 ORTHO05D009453 3.6e-06 56.2 118 31.4
SalBow6G2277 Salvia bowleyana HOM05D010847 ORTHO05D009453 3.6e-06 56.2 118 31.4
PGSC0003DMG400017162 Solanum tuberosum HOM05D008741 ORTHO05D010787 3.6e-06 56.2 76 38.2
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 4.7e-06 55.8 77 40.3
DCAR_001034 Daucus carota HOM05D001383 ORTHO05D000309 4.7e-06 55.8 108 35.2
Nitab4.5_0000110g0350 Nicotiana tabacum HOM05D001883 ORTHO05D002184 4.7e-06 55.8 88 37.5
Solyc01g100107.1 Solanum lycopersicum HOM05D001883 ORTHO05D002184 4.7e-06 55.8 75 38.7
Lsat_1_v5_gn_5_37800 Lactuca sativa HOM05D016857 ORTHO05D019258 6.1e-06 55.5 86 38.4
Nitab4.5_0005967g0040 Nicotiana tabacum HOM05D001883 ORTHO05D002184 6.1e-06 55.5 105 31.4
SalBow3G0556 Salvia bowleyana HOM05D010847 ORTHO05D009453 6.1e-06 55.5 118 31.4
SalBow4G0405 Salvia bowleyana HOM05D008808 ORTHO05D009453 6.1e-06 55.5 59 39.0
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 8.0e-06 55.1 69 36.2
Nitab4.5_0000165g0070 Nicotiana tabacum HOM05D001883 ORTHO05D002184 8.0e-06 55.1 108 32.4
SalBow5G3132 Salvia bowleyana HOM05D010847 ORTHO05D009453 8.0e-06 55.1 107 31.8
Solyc04g017665.1 Solanum lycopersicum HOM05D001883 ORTHO05D002184 8.0e-06 55.1 78 37.2
Solyc12g040648.1 Solanum lycopersicum HOM05D001883 ORTHO05D002184 8.0e-06 55.1 78 37.2


User provided reference genes

Program Settings