Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18477 Striga asiatica HOM05D000330 ORTHO05D404756 1.6e-70 269.2 129 100.0
SGA_v2.0_scaffold122G33278 Striga asiatica HOM05D000330 ORTHO05D000209 1.9e-10 69.7 38 76.3
HanXRQChr04g0125481 Helianthus annuus HOM05D000330 ORTHO05D000209 1.9e-07 59.7 66 45.5
Lsat_1_v5_gn_8_85380 Lactuca sativa HOM05D000330 ORTHO05D000209 4.3e-07 58.5 66 48.5
ATR0626G008 Amborella trichopoda HOM05D000330 ORTHO05D000209 9.5e-07 57.4 44 59.1
Ciclev10027025m.g Citrus clementina HOM05D000330 ORTHO05D000209 9.5e-07 57.4 43 58.1
Gohir.D10G002900 Gossypium hirsutum HOM05D000330 ORTHO05D000209 9.5e-07 57.4 36 69.4
Duzib192G0233 Durio zibethinus HOM05D000330 ORTHO05D000209 1.2e-06 57.0 34 70.6
SalBow6G3217 Salvia bowleyana HOM05D000330 ORTHO05D000209 1.6e-06 56.6 38 65.8
CiPaw.01G089800 Carya illinoinensis HOM05D000330 ORTHO05D000209 2.1e-06 56.2 66 47.0
COL.COLO4_31181 Corchorus olitorius HOM05D000330 ORTHO05D000209 2.1e-06 56.2 34 70.6
ECA236G2561 Erigeron canadensis HOM05D000330 ORTHO05D000209 2.1e-06 56.2 33 66.7
Gohir.A10G002900 Gossypium hirsutum HOM05D000330 ORTHO05D000209 2.1e-06 56.2 34 70.6
Gorai.011G003300 Gossypium raimondii HOM05D000330 ORTHO05D000209 2.1e-06 56.2 34 70.6
Manes.14G132000 Manihot esculenta HOM05D000330 ORTHO05D000209 2.1e-06 56.2 33 72.7
Sed0027031 Sechium edule HOM05D000330 ORTHO05D000209 2.1e-06 56.2 33 72.7
HPP92_021850 Vanilla planifolia HOM05D000330 ORTHO05D000209 2.1e-06 56.2 38 60.5
CANSAT01G2184 Cannabis sativa HOM05D000330 ORTHO05D000209 2.8e-06 55.8 34 67.6
CDE06G1727 Ceratophyllum demersum HOM05D000330 ORTHO05D000209 2.8e-06 55.8 46 58.7
QL05p083871 Quercus lobata HOM05D000330 ORTHO05D000209 2.8e-06 55.8 35 68.6
Thecc.06G060000 Theobroma cacao HOM05D000330 ORTHO05D000209 2.8e-06 55.8 34 70.6
TWI31G0698 Tripterygium wilfordii HOM05D000330 ORTHO05D000209 2.8e-06 55.8 34 64.7
CiPaw.02G127700 Carya illinoinensis HOM05D000330 ORTHO05D000209 3.6e-06 55.5 40 60.0
arahy.Tifrunner.gnm1.ann1.6T2KW8 Arachis hypogaea HOM05D000330 ORTHO05D000209 4.7e-06 55.1 33 69.7
arahy.Tifrunner.gnm1.ann1.EFKW6F Arachis hypogaea HOM05D000330 ORTHO05D000209 4.7e-06 55.1 33 69.7
CiPaw.03G243700 Carya illinoinensis HOM05D000330 ORTHO05D000209 4.7e-06 55.1 33 69.7
HanXRQChr09g0265621 Helianthus annuus HOM05D000330 ORTHO05D000209 4.7e-06 55.1 33 69.7
Lsat_1_v5_gn_4_180161 Lactuca sativa HOM05D000330 ORTHO05D000209 4.7e-06 55.1 33 69.7
Sed0020271 Sechium edule HOM05D000330 ORTHO05D000209 4.7e-06 55.1 33 69.7
HPP92_017558 Vanilla planifolia HOM05D000330 ORTHO05D000209 4.7e-06 55.1 33 69.7
CSS0011573 Camellia sinensis var. sinensis HOM05D000330 ORTHO05D000209 6.2e-06 54.7 38 60.5
CSS0048454 Camellia sinensis var. sinensis HOM05D000330 ORTHO05D000209 6.2e-06 54.7 38 60.5
CANSAT11G0440 Cannabis sativa HOM05D000330 ORTHO05D000209 6.2e-06 54.7 33 69.7
CAN.G1588.9 Capsicum annuum HOM05D000330 ORTHO05D000209 6.2e-06 54.7 40 57.5
HPP92_024101 Vanilla planifolia HOM05D000330 ORTHO05D000209 6.2e-06 54.7 34 67.6
BraA04t16931Z Brassica rapa HOM05D000330 ORTHO05D000209 8.1e-06 54.3 34 64.7
CDE07G1211 Ceratophyllum demersum HOM05D000330 ORTHO05D000209 8.1e-06 54.3 46 56.5
MELO3C012306.2 Cucumis melo HOM05D000330 ORTHO05D000209 8.1e-06 54.3 34 64.7
CsaV3_5G034950 Cucumis sativus L. HOM05D000330 ORTHO05D000209 8.1e-06 54.3 34 64.7
FAN09G3250 Fragaria x ananassa HOM05D000330 ORTHO05D000209 8.1e-06 54.3 66 42.4


User provided reference genes

Program Settings