Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 5.5e-59 230.7 112 100.0
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 4.2e-51 204.5 112 85.7
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 2.3e-49 198.7 112 83.0
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 4.1e-46 188.0 115 80.0
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 5.0e-44 181.0 112 76.8
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 1.1e-43 179.9 117 74.4
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 2.5e-43 178.7 112 75.0
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.5e-43 178.7 112 75.9
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 4.2e-43 177.9 117 70.9
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 5.5e-43 177.6 117 75.2
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.6e-42 176.0 117 70.9
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 4.6e-42 174.5 118 72.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 7.9e-42 173.7 115 69.6
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 1.1e-40 169.9 111 73.9
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 1.1e-40 169.9 111 73.9
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.9e-40 169.1 132 67.4
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.9e-40 169.1 126 69.0
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.5e-40 168.7 117 72.6
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 4.3e-40 167.9 118 69.5
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 1.7e-39 166.0 103 77.7
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 2.2e-39 165.6 118 69.5
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 6.3e-39 164.1 125 66.4
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 1.4e-38 162.9 106 72.6
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 3.1e-38 161.8 121 66.1
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 9.1e-38 160.2 106 73.6
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 1.2e-37 159.8 117 70.9
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 2.6e-37 158.7 114 70.2
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 4.5e-37 157.9 104 75.0
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 7.7e-37 157.1 104 71.2
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.0e-36 156.8 105 75.2
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 1.7e-36 156.0 97 75.3
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 2.2e-36 155.6 112 67.9
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 2.9e-36 155.2 105 71.4
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 3.8e-36 154.8 107 73.8
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 6.5e-36 154.1 113 66.4
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 6.5e-36 154.1 106 72.6
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 8.5e-36 153.7 102 73.5
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 8.5e-36 153.7 97 75.3
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.1e-35 153.3 106 69.8
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 1.4e-35 152.9 106 74.5
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.4e-35 152.9 106 73.6
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.4e-35 152.9 104 71.2
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.9e-35 152.5 103 69.9
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 1.9e-35 152.5 103 70.9
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.9e-35 152.5 97 75.3
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 1.9e-35 152.5 97 75.3
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.5e-35 152.1 103 70.9
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 2.5e-35 152.1 75 90.7
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 2.5e-35 152.1 103 70.9
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.5e-35 152.1 104 70.2
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 2.5e-35 152.1 97 74.2
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 3.2e-35 151.8 103 70.9
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 3.2e-35 151.8 113 65.5
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 4.2e-35 151.4 104 73.1
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 4.2e-35 151.4 104 70.2
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 4.2e-35 151.4 75 89.3
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 4.2e-35 151.4 106 67.9
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 5.5e-35 151.0 102 72.5
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 5.5e-35 151.0 99 72.7
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 7.2e-35 150.6 103 69.9
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 7.2e-35 150.6 104 69.2
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 7.2e-35 150.6 106 69.8
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.2e-35 150.6 97 74.2
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 7.2e-35 150.6 105 68.6
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 9.4e-35 150.2 101 68.3
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.2e-34 149.8 107 67.3
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 1.2e-34 149.8 109 68.8
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.6e-34 149.4 104 68.3
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 1.6e-34 149.4 106 67.9
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 1.6e-34 149.4 107 67.3
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 2.1e-34 149.1 105 71.4
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.1e-34 149.1 106 71.7
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 2.7e-34 148.7 120 60.8
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.7e-34 148.7 105 67.6
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 2.7e-34 148.7 106 69.8
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 2.7e-34 148.7 110 66.4
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.7e-34 148.7 106 70.8
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.6e-34 148.3 115 64.3
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 3.6e-34 148.3 109 66.1
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 4.7e-34 147.9 104 67.3
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.7e-34 147.9 75 86.7
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 6.1e-34 147.5 171 50.3
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 6.1e-34 147.5 102 69.6
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.0e-33 146.7 110 66.4
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.8e-33 146.0 106 67.0
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 1.8e-33 146.0 94 73.4
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 2.3e-33 145.6 104 66.3
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.3e-33 145.6 108 63.0
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 2.3e-33 145.6 106 67.0
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 3.9e-33 144.8 94 73.4
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 5.1e-33 144.4 105 65.7
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 5.1e-33 144.4 105 65.7
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 5.1e-33 144.4 106 66.0
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 5.1e-33 144.4 104 69.2
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.5e-32 142.9 75 84.0
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 4.4e-32 141.4 114 64.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.4e-30 136.3 66 92.4
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.7e-28 129.4 66 86.4
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 3.8e-28 128.3 93 65.6
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 5.0e-28 127.9 103 62.1
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.1e-27 126.7 64 89.1
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.1e-27 126.7 116 58.6
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.9e-27 125.9 81 70.4
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 5.5e-27 124.4 71 74.6
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.1e-26 122.5 65 86.2
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 1.0e-25 120.2 75 74.7
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 2.3e-25 119.0 104 52.9
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.1e-24 116.7 62 83.9
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.3e-24 115.2 72 72.2
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.3e-23 113.2 73 67.1
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.4e-22 109.8 65 81.5
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.5e-21 105.1 103 55.3
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 1.6e-18 96.3 93 50.5
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 6.7e-17 90.9 68 72.1
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 5.3e-14 81.3 95 45.3
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 4.5e-13 78.2 70 65.7
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.7e-12 76.3 81 55.6
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 5.5e-11 71.2 80 52.5
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 6.1e-10 67.8 35 77.1


User provided reference genes

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