Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18437 Striga asiatica HOM05D024109 ORTHO05D003557 0.0e+00 1097.8 759 100.0
SGA_v2.0_scaffold443G51694 Striga asiatica HOM05D024109 ORTHO05D003557 3.5e-48 197.6 136 81.6
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 2.1e-45 188.3 785 30.4
SGA_v2.0_scaffold205G41800 Striga asiatica HOM05D024109 ORTHO05D003557 3.6e-45 187.6 117 90.6
SGA_v2.0_scaffold34G13885 Striga asiatica HOM05D024109 ORTHO05D003557 7.7e-40 169.9 119 79.8
SGA_v2.0_scaffold389G50559 Striga asiatica HOM05D024109 ORTHO05D003557 1.7e-39 168.7 108 88.9
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 1.9e-30 138.7 782 29.4
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 1.6e-24 119.0 346 31.2
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 3.4e-19 101.3 265 34.7
Oeu061066.1 Olea europaea HOM05D004299 ORTHO05D003557 3.7e-18 97.8 816 24.9
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 8.6e-15 86.7 228 32.9
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 1.4e-12 79.3 826 24.0
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 2.3e-12 78.6 820 24.5
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 6.8e-12 77.0 422 25.8
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 6.8e-12 77.0 213 34.7
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 2.6e-11 75.1 210 32.9
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 9.9e-11 73.2 203 32.5
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 1.7e-10 72.4 442 26.2
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 4.9e-10 70.9 258 27.1
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 6.4e-10 70.5 401 25.9
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 1.1e-09 69.7 229 31.9
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 1.1e-09 69.7 269 29.4
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 1.4e-09 69.3 435 26.9
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 1.9e-09 68.9 205 30.7
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 1.9e-09 68.9 218 31.7
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 3.2e-09 68.2 256 30.5
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 3.2e-09 68.2 214 29.9
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 4.1e-09 67.8 279 28.3
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 4.1e-09 67.8 256 30.5
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 4.1e-09 67.8 321 27.1
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 5.4e-09 67.4 223 29.1
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 7.1e-09 67.0 273 29.7
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 9.2e-09 66.6 223 29.1
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 1.2e-08 66.2 389 25.2
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 1.2e-08 66.2 292 29.5
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 2.7e-08 65.1 210 30.5
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 3.5e-08 64.7 280 27.1
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 3.5e-08 64.7 443 23.9
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 4.6e-08 64.3 34 85.3
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 4.6e-08 64.3 313 26.5
PSO478G4400 Papaver somniferum HOM05D018639 ORTHO05D003557 4.6e-08 64.3 33 87.9
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 4.6e-08 64.3 33 90.9
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 6.0e-08 63.9 34 85.3
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 6.0e-08 63.9 98 41.8
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 7.8e-08 63.5 33 87.9
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 7.8e-08 63.5 33 87.9
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 1.0e-07 63.2 219 31.1
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 1.0e-07 63.2 33 90.9
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 1.0e-07 63.2 281 27.0
unitig_0.g2432 Utricularia gibba HOM05D004299 ORTHO05D003557 1.0e-07 63.2 170 38.8
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 1.7e-07 62.4 355 25.6
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 2.3e-07 62.0 354 27.4
PSO063G4917 Papaver somniferum HOM05D018639 ORTHO05D003557 2.3e-07 62.0 33 84.8
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 2.3e-07 62.0 215 28.8
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 3.0e-07 61.6 34 82.4
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 3.0e-07 61.6 33 84.8
DCAR_014573 Daucus carota HOM05D004299 ORTHO05D003557 3.9e-07 61.2 261 28.4
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 3.9e-07 61.2 34 82.4
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 6.6e-07 60.5 421 26.6
Lsat_1_v5_gn_8_135240 Lactuca sativa HOM05D004299 ORTHO05D003557 6.6e-07 60.5 344 27.9
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 6.6e-07 60.5 374 25.9
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 8.6e-07 60.1 34 76.5
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 1.1e-06 59.7 194 31.4
HanXRQChr05g0158421 Helianthus annuus HOM05D000441 ORTHO05D003557 1.1e-06 59.7 34 82.4
HanXRQChr12g0357091 Helianthus annuus HOM05D000441 ORTHO05D003557 1.1e-06 59.7 34 82.4
HanXRQChr17g0541651 Helianthus annuus HOM05D004299 ORTHO05D003557 1.1e-06 59.7 34 79.4
MELO3C026497.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.9e-06 58.9 33 78.8
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 1.9e-06 58.9 213 29.6
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 2.5e-06 58.5 798 24.4
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 2.5e-06 58.5 406 24.9
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 3.3e-06 58.2 34 73.5
A06p26270 Brassica napus HOM05D004299 ORTHO05D003557 3.3e-06 58.2 34 76.5
BNapus_Darmor_BZH_scaffold_162p00030 Brassica napus HOM05D004299 ORTHO05D003557 3.3e-06 58.2 34 76.5
BNapus_Darmor_BZH_scaffold_78p00020 Brassica napus HOM05D004299 ORTHO05D003557 3.3e-06 58.2 34 76.5
BolC1t05844H Brassica oleracea HOM05D004299 ORTHO05D003557 3.3e-06 58.2 34 76.5
BraA01t04590Z Brassica rapa HOM05D004299 ORTHO05D003557 3.3e-06 58.2 34 76.5
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 4.3e-06 57.8 32 81.2
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 4.3e-06 57.8 33 78.8
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 4.3e-06 57.8 33 78.8
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 4.3e-06 57.8 33 78.8
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 4.3e-06 57.8 33 78.8
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 4.3e-06 57.8 33 75.8
Zm00001eb188050 Zea mays HOM05D021310 ORTHO05D003557 4.3e-06 57.8 34 76.5
Lsat_1_v5_gn_3_37901 Lactuca sativa HOM05D004299 ORTHO05D003557 5.6e-06 57.4 270 25.9
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 7.3e-06 57.0 231 29.9
MELO3C026562.2 Cucumis melo HOM05D004299 ORTHO05D003557 7.3e-06 57.0 33 78.8
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 7.3e-06 57.0 401 24.4
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 9.6e-06 56.6 34 73.5
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 9.6e-06 56.6 34 73.5
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 9.6e-06 56.6 255 28.6
Ciclev10023587m.g Citrus clementina HOM05D004299 ORTHO05D003557 9.6e-06 56.6 93 45.2


User provided reference genes

Program Settings