Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold50G18423 Striga asiatica HOM05D056464 ORTHO05D001737 7.5e-87 323.9 177 100.0
SGA_v2.0_scaffold143G35746 Striga asiatica HOM05D056464 ORTHO05D001737 7.8e-44 181.0 151 68.2
MSTRG.4940 Avicennia marina HOM05D001878 ORTHO05D001737 4.6e-20 102.1 149 47.7
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.8e-19 100.1 149 47.0
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 2.3e-19 99.8 148 45.9
Migut.N01727 Erythranthe guttata HOM05D001878 ORTHO05D001737 1.8e-16 90.1 155 44.5
SGA_v2.0_scaffold288G47234 Striga asiatica HOM05D017394 ORTHO05D001737 3.1e-16 89.4 72 70.8
Oeu037430.1 Olea europaea HOM05D001878 ORTHO05D001737 7.2e-13 78.2 152 39.5
Oeu026349.1 Olea europaea HOM05D001878 ORTHO05D001737 1.3e-11 73.9 154 39.6
unitig_0.g2758 Utricularia gibba HOM05D001878 ORTHO05D001737 3.9e-11 72.4 147 36.1
SGA_v2.0_scaffold77G25265 Striga asiatica HOM05D001878 ORTHO05D001737 2.8e-09 66.2 142 38.0
SGA_v2.0_scaffold332G48948 Striga asiatica HOM05D017394 ORTHO05D001737 5.3e-08 62.0 50 86.0
Cc02_g25370 Coffea canephora HOM05D001878 ORTHO05D001737 9.0e-08 61.2 153 34.0
Solyc01g088820.2 Solanum lycopersicum HOM05D001878 ORTHO05D001737 1.5e-07 60.5 148 31.8
Sopen01g035660 Solanum pennellii HOM05D001878 ORTHO05D001737 2.6e-07 59.7 148 31.8
Peaxi162Scf00853g00433 Petunia axillaris HOM05D001878 ORTHO05D001737 4.5e-07 58.9 157 34.4
Nitab4.5_0000563g0150 Nicotiana tabacum HOM05D001878 ORTHO05D001737 1.3e-06 57.4 150 33.3
SGA_v2.0_scaffold113G31714 Striga asiatica HOM05D017394 ORTHO05D001737 1.7e-06 57.0 54 64.8
SGA_v2.0_scaffold142G35665 Striga asiatica HOM05D017394 ORTHO05D001737 6.5e-06 55.1 54 61.1


User provided reference genes

Program Settings