Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold502G52516 Striga asiatica HOM05D003827 ORTHO05D004518 2.6e-65 251.9 129 100.0
MSTRG.21519 Avicennia marina HOM05D003827 ORTHO05D004518 1.8e-26 122.9 143 51.0
SGA_v2.0_scaffold214G42261 Striga asiatica HOM05D003827 ORTHO05D004518 6.6e-24 114.4 69 84.1
SalBow4G1883 Salvia bowleyana HOM05D003827 ORTHO05D004518 6.1e-22 107.8 143 45.5
SalBow4G1898 Salvia bowleyana HOM05D003827 ORTHO05D004518 6.1e-22 107.8 143 45.5
Migut.D00347 Erythranthe guttata HOM05D003827 ORTHO05D004518 2.9e-19 99.0 149 43.0
MSTRG.12545 Avicennia marina HOM05D003827 ORTHO05D004518 7.0e-18 94.4 148 43.9
MSTRG.17468 Avicennia marina HOM05D003827 ORTHO05D004518 3.5e-17 92.0 146 41.1
Oeu058798.1 Olea europaea HOM05D003827 ORTHO05D004518 4.0e-13 78.6 145 43.4
Potri.002G046700 Populus trichocarpa HOM05D003827 ORTHO05D004518 1.5e-12 76.6 140 41.4
Nitab4.5_0010556g0020 Nicotiana tabacum HOM05D003827 ORTHO05D004518 2.0e-12 76.3 153 39.9
Oeu011513.1 Olea europaea HOM05D003827 ORTHO05D004518 3.4e-12 75.5 137 36.5
Dinv22492 Davidia involucrata HOM05D003827 ORTHO05D004518 5.8e-12 74.7 144 42.4
Sabra02G0037600 Salix brachista HOM05D003827 ORTHO05D004518 9.8e-12 73.9 142 42.3
Nitab4.5_0000617g0200 Nicotiana tabacum HOM05D003827 ORTHO05D004518 1.3e-11 73.6 153 39.2
Peaxi162Scf01038g00148 Petunia axillaris HOM05D003827 ORTHO05D004518 2.2e-11 72.8 152 42.8
Lj1A56T63 Lonicera japonica HOM05D003827 ORTHO05D004518 8.3e-11 70.9 145 37.2
MSTRG.18275 Avicennia marina HOM05D003827 ORTHO05D004518 1.9e-10 69.7 143 37.1
Solyc07g008670.3 Solanum lycopersicum HOM05D003827 ORTHO05D004518 2.4e-10 69.3 152 40.1
PGSC0003DMG400022986 Solanum tuberosum HOM05D003827 ORTHO05D004518 2.4e-10 69.3 154 39.6
Migut.N02178 Erythranthe guttata HOM05D003827 ORTHO05D004518 3.2e-10 68.9 140 37.9
Sopen07g004600 Solanum pennellii HOM05D003827 ORTHO05D004518 3.2e-10 68.9 152 40.1
Prupe.8G233400 Prunus persica HOM05D003827 ORTHO05D004518 4.6e-09 65.1 141 42.6
SalBow6G3195 Salvia bowleyana HOM05D003827 ORTHO05D004518 6.0e-09 64.7 146 37.7
Cfa006213 Carpinus fangiana HOM05D003827 ORTHO05D004518 7.8e-09 64.3 146 41.1
Haze_04629 Corylus avellana HOM05D003827 ORTHO05D004518 7.8e-09 64.3 146 41.1
Lsat_1_v5_gn_5_184780 Lactuca sativa HOM05D003827 ORTHO05D004518 1.0e-08 63.9 142 38.7
vmacro02620 Vaccinium macrocarpon HOM05D003827 ORTHO05D004518 1.3e-08 63.5 139 37.4
SGA_v2.0_scaffold76G25113 Striga asiatica HOM05D003827 ORTHO05D004518 2.3e-08 62.8 58 63.8
CSS0001059 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D004518 5.0e-08 61.6 130 42.3
Nn1g02509 Nelumbo nucifera HOM05D003827 ORTHO05D004518 8.6e-08 60.8 153 35.3
Aqoxy2G03489 Aquilegia oxysepala HOM05D003827 ORTHO05D004518 1.9e-07 59.7 138 38.4
Gohir.A07G207900 Gossypium hirsutum HOM05D003827 ORTHO05D004518 4.3e-07 58.5 146 39.0
Thecc.01G269500 Theobroma cacao HOM05D003827 ORTHO05D004518 4.3e-07 58.5 141 40.4
Dinv34555 Davidia involucrata HOM05D003827 ORTHO05D004518 5.6e-07 58.2 141 37.6
Manes.01G203100 Manihot esculenta HOM05D003827 ORTHO05D004518 5.6e-07 58.2 146 38.4
CSS0010046 Camellia sinensis var. sinensis HOM05D003827 ORTHO05D004518 9.5e-07 57.4 149 33.6
Nn3g19462 Nelumbo nucifera HOM05D003827 ORTHO05D004518 9.5e-07 57.4 155 34.8
COL.COLO4_06099 Corchorus olitorius HOM05D003827 ORTHO05D004518 1.2e-06 57.0 135 37.8
Duzib138G1561 Durio zibethinus HOM05D003827 ORTHO05D004518 1.2e-06 57.0 140 38.6
CANSAT25G1147 Cannabis sativa HOM05D003827 ORTHO05D004518 1.6e-06 56.6 158 33.5
Potri.005G216300 Populus trichocarpa HOM05D003827 ORTHO05D004518 1.6e-06 56.6 142 35.2
Sabra05G0165800 Salix brachista HOM05D003827 ORTHO05D004518 2.1e-06 56.2 145 37.9
TAR633G1445 Trochodendron aralioides HOM05D003827 ORTHO05D004518 2.1e-06 56.2 157 33.8
Cc00_g27210 Coffea canephora HOM05D003827 ORTHO05D004518 2.8e-06 55.8 141 36.2
Rhsim13G0030000 Rhododendron simsii HOM05D003827 ORTHO05D004518 2.8e-06 55.8 148 37.2
TAR362G1025 Trochodendron aralioides HOM05D003827 ORTHO05D004518 4.7e-06 55.1 154 35.1
Gorai.001G241900 Gossypium raimondii HOM05D003827 ORTHO05D004518 8.1e-06 54.3 136 39.0


User provided reference genes

Program Settings