Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02518 Striga asiatica HOM05D007963 ORTHO05D009967 2.5e-62 241.9 120 100.0
SalBow5G1437 Salvia bowleyana HOM05D007963 ORTHO05D009967 3.9e-31 138.3 121 61.2
SalBow5G4167 Salvia bowleyana HOM05D007963 ORTHO05D009967 3.9e-31 138.3 121 61.2
MSTRG.20574 Avicennia marina HOM05D007963 ORTHO05D009967 3.3e-30 135.2 117 60.7
Nn2g15279 Nelumbo nucifera HOM05D007963 ORTHO05D009967 1.6e-24 116.3 109 52.3
Migut.B01286 Erythranthe guttata HOM05D007963 ORTHO05D009967 2.7e-24 115.5 119 55.5
TAR369G0233 Trochodendron aralioides HOM05D007963 ORTHO05D009967 2.0e-22 109.4 119 48.7
Potri.009G059100 Populus trichocarpa HOM05D007963 ORTHO05D009967 3.3e-22 108.6 118 50.8
PGSC0003DMG400023738 Solanum tuberosum HOM05D007963 ORTHO05D009967 1.7e-21 106.3 95 58.9
vmacro13678 Vaccinium macrocarpon HOM05D007963 ORTHO05D009967 2.8e-21 105.5 119 49.6
Sopen10g031160 Solanum pennellii HOM05D007963 ORTHO05D009967 1.4e-20 103.2 87 58.6
MBI04_g34432_MAGBIO Magnolia biondii HOM05D007963 ORTHO05D009967 4.5e-19 98.2 105 49.5
Rhsim07G0056600 Rhododendron simsii HOM05D007963 ORTHO05D009967 7.7e-19 97.4 121 47.9
Thecc.01G408600 Theobroma cacao HOM05D007963 ORTHO05D009967 1.0e-18 97.1 93 54.8
Manes.07G007300 Manihot esculenta HOM05D007963 ORTHO05D009967 1.7e-18 96.3 120 47.5
Gohir.A08G143400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 1.1e-17 93.6 67 62.7
Gorai.004G171400 Gossypium raimondii HOM05D007963 ORTHO05D009967 1.1e-17 93.6 67 62.7
unitig_61.g26362 Utricularia gibba HOM05D007963 ORTHO05D009967 2.5e-17 92.4 107 47.7
CSS0005909 Camellia sinensis var. sinensis HOM05D007963 ORTHO05D009967 3.2e-17 92.0 89 52.8
Eucgr.J01210 Eucalyptus grandis HOM05D007963 ORTHO05D009967 3.2e-17 92.0 71 62.0
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 4.2e-17 91.7 109 45.9
Duzib133G0999 Durio zibethinus HOM05D007963 ORTHO05D009967 4.2e-17 91.7 94 50.0
CiPaw.13G006800 Carya illinoinensis HOM05D007963 ORTHO05D009967 5.5e-17 91.3 97 49.5
Gohir.D08G164400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 9.4e-17 90.5 63 65.1
Cfa010795 Carpinus fangiana HOM05D007963 ORTHO05D009967 1.2e-16 90.1 117 47.9
DCAR_003219 Daucus carota HOM05D007963 ORTHO05D009967 1.6e-16 89.7 75 57.3
QL04p008099 Quercus lobata HOM05D007963 ORTHO05D009967 1.6e-16 89.7 120 45.8
QL04p008549 Quercus lobata HOM05D007963 ORTHO05D009967 1.6e-16 89.7 120 45.8
CiPaw.14G001400 Carya illinoinensis HOM05D007963 ORTHO05D009967 3.6e-16 88.6 94 51.1
Haze_03176 Corylus avellana HOM05D007963 ORTHO05D009967 3.6e-16 88.6 117 48.7
Prupe.2G017200 Prunus persica HOM05D007963 ORTHO05D009967 3.6e-16 88.6 66 62.1
Sabra09G0043500 Salix brachista HOM05D007963 ORTHO05D009967 4.7e-16 88.2 110 44.5
MD02G1308200 Malus domestica HOM05D007963 ORTHO05D009967 8.0e-16 87.4 74 60.8
RcHm_v2.0_Chr7g0228141 Rosa chinensis HOM05D007963 ORTHO05D009967 1.4e-15 86.7 123 41.5
ClCG10G012280 Citrullus lanatus HOM05D007963 ORTHO05D009967 4.0e-15 85.1 119 44.5
FvH4_5g32100 Fragaria vesca HOM05D007963 ORTHO05D009967 4.0e-15 85.1 82 50.0
HanXRQChr01g0016481 Helianthus annuus HOM05D007963 ORTHO05D009967 4.0e-15 85.1 61 62.3
Sc23g0005920 Simmondsia chinensis HOM05D007963 ORTHO05D009967 5.2e-15 84.7 81 54.3
Ciclev10033085m.g Citrus clementina HOM05D007963 ORTHO05D009967 8.8e-15 84.0 94 43.6
COL.COLO4_04871 Corchorus olitorius HOM05D007963 ORTHO05D009967 8.8e-15 84.0 90 50.0
AUR62009397 Chenopodium quinoa HOM05D007963 ORTHO05D009967 1.5e-14 83.2 68 58.8
TWI09G0461 Tripterygium wilfordii HOM05D007963 ORTHO05D009967 1.5e-14 83.2 66 62.1
Hma1.2p1_2160F.1_g315600 Hydrangea macrophylla HOM05D007963 ORTHO05D009967 2.0e-14 82.8 63 60.3
Lj3g0025556 Lotus japonicus HOM05D007963 ORTHO05D009967 2.0e-14 82.8 118 42.4
Lsat_1_v5_gn_1_105740 Lactuca sativa HOM05D007963 ORTHO05D009967 4.4e-14 81.6 70 52.9
VMungo1127G0040 Vigna mungo HOM05D007963 ORTHO05D009967 4.4e-14 81.6 112 43.8
Atru.chr11.2601 Acer truncatum HOM05D007963 ORTHO05D009967 7.5e-14 80.9 90 45.6
Glyma.12G008400 Glycine max HOM05D007963 ORTHO05D009967 1.3e-13 80.1 123 43.1
MELO3C023985.2 Cucumis melo HOM05D007963 ORTHO05D009967 2.2e-13 79.3 113 41.6
Os03g0217000 Oryza sativa ssp. japonica HOM05D007963 ORTHO05D009967 2.2e-13 79.3 57 59.6
CsaV3_3G032070 Cucumis sativus L. HOM05D007963 ORTHO05D009967 8.3e-13 77.4 78 51.3
Zm00001eb400040 Zea mays HOM05D007963 ORTHO05D009967 1.1e-12 77.0 57 59.6
Sed0018324 Sechium edule HOM05D007963 ORTHO05D009967 4.1e-12 75.1 115 38.3
Lalb_Chr20g0107921 Lupinus albus HOM05D007963 ORTHO05D009967 5.4e-12 74.7 83 50.6
Sed0005364 Sechium edule HOM05D007963 ORTHO05D009967 2.0e-11 72.8 66 54.5
Phvul.011G012801 Phaseolus vulgaris HOM05D007963 ORTHO05D009967 1.0e-10 70.5 50 62.0
Medtr4g039540 Medicago truncatula HOM05D007963 ORTHO05D009967 2.9e-10 68.9 40 77.5
BcaB01g00449 Brassica carinata HOM05D007963 ORTHO05D009967 2.5e-09 65.9 114 39.5
C08p27320 Brassica napus HOM05D007963 ORTHO05D009967 2.5e-09 65.9 114 39.5
Thhalv10010836m.g Eutrema salsugineum HOM05D007963 ORTHO05D009967 2.5e-09 65.9 114 39.5
BcaNung06964 Brassica carinata HOM05D007963 ORTHO05D009967 3.3e-09 65.5 106 41.5
Cpa.g.sc125.16 Carica papaya HOM05D007963 ORTHO05D009967 7.2e-09 64.3 62 53.2
BolC8t50349H Brassica oleracea HOM05D007963 ORTHO05D009967 9.5e-09 63.9 114 38.6
BcaB02g08592 Brassica carinata HOM05D007963 ORTHO05D009967 6.1e-08 61.2 111 40.5
AL5G32620 Arabidopsis lyrata HOM05D007963 ORTHO05D009967 1.0e-07 60.5 113 44.2
A09p45130 Brassica napus HOM05D007963 ORTHO05D009967 1.0e-07 60.5 114 37.7
BraA09t39974Z Brassica rapa HOM05D007963 ORTHO05D009967 1.0e-07 60.5 114 37.7
SEGI_13442 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 1.4e-07 60.1 51 54.9
SEGI_37070 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 1.4e-07 60.1 51 54.9
A04p07310 Brassica napus HOM05D007963 ORTHO05D009967 2.3e-07 59.3 111 39.6
BraA04t16426Z Brassica rapa HOM05D007963 ORTHO05D009967 2.3e-07 59.3 111 39.6
AT3G52070 Arabidopsis thaliana HOM05D007963 ORTHO05D009967 5.2e-07 58.2 94 45.7
BcaNung06087 Brassica carinata HOM05D007963 ORTHO05D009967 6.8e-07 57.8 67 47.8
CARHR161770 Cardamine hirsuta HOM05D007963 ORTHO05D009967 8.9e-07 57.4 63 47.6
BcaC02g09285 Brassica carinata HOM05D007963 ORTHO05D009967 1.2e-06 57.0 112 41.1
ATR0332G088 Amborella trichopoda HOM05D007963 ORTHO05D009967 9.8e-06 53.9 38 65.8
AagrBONN_evm.TU.Sc2ySwM_228.4962 Anthoceros agrestis HOM05D025110 ORTHO05D009967 9.8e-06 53.9 38 60.5


User provided reference genes

Program Settings