Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02506 Striga asiatica HOM05D000096 ORTHO05D000045 1.0e-87 326.6 158 100.0
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 2.0e-35 152.9 184 46.7
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 2.0e-27 126.3 171 40.4
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-27 124.4 166 41.0
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 8.6e-26 120.9 171 41.5
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 4.4e-22 108.6 171 36.8
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 2.2e-21 106.3 171 36.3
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 4.9e-21 105.1 170 36.5
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 1.4e-20 103.6 171 36.3
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 1.9e-20 103.2 172 35.5
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 7.0e-20 101.3 171 33.9
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.6e-19 98.6 149 36.2
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-18 97.4 171 34.5
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.0e-18 97.4 171 34.5
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.3e-18 96.3 171 36.8
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.0e-18 95.9 171 33.9
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.6e-18 94.7 152 37.5
SGA_v2.0_scaffold27G11560 Striga asiatica HOM05D000096 ORTHO05D000045 8.6e-18 94.4 94 53.2
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 1.5e-17 93.6 174 33.9
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-17 93.2 172 32.0
Oeu049717.1 Olea europaea HOM05D000096 ORTHO05D000045 1.9e-17 93.2 172 32.0
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-17 92.8 172 32.0
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-17 92.8 171 33.3
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 3.3e-17 92.4 174 35.1
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.3e-17 92.4 173 34.7
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.3e-17 92.4 173 34.7
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.3e-17 92.0 171 33.9
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.3e-17 92.0 171 36.3
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.3e-17 92.0 171 36.3
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 4.3e-17 92.0 172 31.4
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 2.1e-16 89.7 172 33.1
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 2.8e-16 89.4 172 33.7
Oeu027785.3 Olea europaea HOM05D000096 ORTHO05D000045 2.8e-16 89.4 172 31.4
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 4.7e-16 88.6 185 31.4
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.2e-16 88.2 171 34.5
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.1e-16 87.8 169 33.1
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.1e-16 87.8 173 32.4
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 1.8e-15 86.7 171 30.4
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.3e-15 86.3 136 37.5
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 2.3e-15 86.3 172 30.8
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 3.1e-15 85.9 170 32.4
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 3.1e-15 85.9 171 29.8
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.0e-15 85.5 171 33.3
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 5.2e-15 85.1 175 34.9
Oeu061729.1 Olea europaea HOM05D000096 ORTHO05D000045 5.2e-15 85.1 176 29.5
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.8e-15 84.7 136 35.3
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 6.8e-15 84.7 171 29.8
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 6.8e-15 84.7 110 43.6
SGA_v2.0_scaffold33G13378 Striga asiatica HOM05D000096 ORTHO05D000045 6.8e-15 84.7 134 42.5
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 8.9e-15 84.3 170 31.2
CiPaw.01G147400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-14 84.0 136 36.8
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.2e-14 84.0 174 29.9
Oeu043599.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-14 84.0 175 30.9
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 1.5e-14 83.6 172 31.4
Oeu032961.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-14 83.2 178 30.9
SGA_v2.0_scaffold142G35702 Striga asiatica HOM05D000096 ORTHO05D000045 2.0e-14 83.2 143 36.4
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 2.6e-14 82.8 168 30.4
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 3.4e-14 82.4 168 30.4
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 5.8e-14 81.6 120 36.7
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.8e-14 81.6 120 39.2
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 5.8e-14 81.6 174 31.0
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 7.5e-14 81.3 174 28.7
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 7.5e-14 81.3 171 31.6
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-13 80.5 167 29.9
Oeu057797.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-13 80.1 126 33.3
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 3.7e-13 79.0 167 29.9
SGA_v2.0_scaffold160G37714 Striga asiatica HOM05D018457 ORTHO05D000045 3.7e-13 79.0 123 39.0
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 6.4e-13 78.2 171 30.4
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.4e-13 78.2 136 35.3
AUR62027939 Chenopodium quinoa HOM05D000096 ORTHO05D000045 6.4e-13 78.2 170 30.6
Oeu007468.1 Olea europaea HOM05D000096 ORTHO05D000045 6.4e-13 78.2 171 26.3
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 8.3e-13 77.8 120 34.2
Oeu054515.1 Olea europaea HOM05D000096 ORTHO05D000045 8.3e-13 77.8 167 28.7
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 1.1e-12 77.4 151 33.1
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 1.1e-12 77.4 120 34.2
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-12 77.4 120 37.5
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 1.4e-12 77.0 168 28.6
EL10Ac6g14190 Beta vulgaris HOM05D000096 ORTHO05D000045 1.9e-12 76.6 136 31.6
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 1.9e-12 76.6 169 28.4
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-12 76.3 158 32.9
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 3.2e-12 75.9 169 28.4
Oeu017669.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-12 75.1 126 32.5
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.1e-12 74.7 143 36.4
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 1.2e-11 73.9 120 33.3
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.6e-11 73.6 119 36.1
EL10Ac7g17652 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-11 73.2 141 33.3
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 6.0e-11 71.6 128 34.4
CANSAT64G0254 Cannabis sativa HOM05D000096 ORTHO05D000045 1.0e-10 70.9 100 36.0
Oeu031271.1 Olea europaea HOM05D000096 ORTHO05D000045 1.0e-10 70.9 132 30.3
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.7e-10 70.1 174 29.3
Oeu029175.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-10 70.1 111 35.1
Aqoxy6G02750 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 2.3e-10 69.7 174 28.7
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 2.3e-10 69.7 120 34.2
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 2.3e-10 69.7 163 31.3
Oeu063187.1 Olea europaea HOM05D000096 ORTHO05D000045 5.1e-10 68.6 110 35.5
EL10Ac1g01711 Beta vulgaris HOM05D000096 ORTHO05D000045 8.6e-10 67.8 120 32.5
Oeu049649.1 Olea europaea HOM05D000096 ORTHO05D000045 8.6e-10 67.8 169 28.4
Oeu057913.1 Olea europaea HOM05D000096 ORTHO05D000045 8.6e-10 67.8 102 39.2
EL10Ac1g01294 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-09 67.0 128 30.5
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 1.5e-09 67.0 84 45.2
Cc02_g03220 Coffea canephora HOM05D000096 ORTHO05D000045 1.9e-09 66.6 90 40.0
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 2.5e-09 66.2 109 33.0
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-09 66.2 74 48.6
CANSAT01G2209 Cannabis sativa HOM05D000096 ORTHO05D000045 9.5e-09 64.3 100 33.0
RcHm_v2.0_Chr5g0013161 Rosa chinensis HOM05D000096 ORTHO05D000045 1.2e-08 63.9 173 31.2
Oeu025879.1 Olea europaea HOM05D000096 ORTHO05D000045 1.6e-08 63.5 111 32.4
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 1.6e-08 63.5 84 44.0
SGA_v2.0_scaffold4G02282 Striga asiatica HOM05D018457 ORTHO05D000045 1.6e-08 63.5 86 41.9
CiPaw.09G061200 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.1e-08 63.2 100 36.0
CiPaw.10G073400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.1e-08 63.2 100 36.0
Oeu050616.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-08 63.2 101 30.7
EL10Ac8g20308 Beta vulgaris HOM05D000096 ORTHO05D000045 2.8e-08 62.8 140 30.0
Oeu061219.1 Olea europaea HOM05D000096 ORTHO05D000045 3.6e-08 62.4 107 33.6
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 8.1e-08 61.2 108 30.6
FvH4_3g36631 Fragaria vesca HOM05D000096 ORTHO05D000045 8.1e-08 61.2 173 30.6
Aqoxy3G01378 Aquilegia oxysepala HOM05D000096 ORTHO05D000045 1.1e-07 60.8 172 27.3
RcHm_v2.0_Chr2g0140301 Rosa chinensis HOM05D000096 ORTHO05D000045 1.1e-07 60.8 172 29.1
Oeu033280.1 Olea europaea HOM05D000096 ORTHO05D000045 1.4e-07 60.5 104 32.7
Oeu037905.1 Olea europaea HOM05D000096 ORTHO05D000045 1.8e-07 60.1 109 32.1
Oeu007626.1 Olea europaea HOM05D000096 ORTHO05D000045 2.3e-07 59.7 111 32.4
Oeu024546.1 Olea europaea HOM05D000096 ORTHO05D000045 2.3e-07 59.7 101 29.7
ECA055G0001 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.1e-07 59.3 97 37.1
ECA238G2729 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.1e-07 59.3 143 30.1
Oeu003460.1 Olea europaea HOM05D000096 ORTHO05D000045 3.1e-07 59.3 111 31.5
Oeu046629.1 Olea europaea HOM05D000096 ORTHO05D000045 6.8e-07 58.2 101 30.7
CiPaw.09G109800 Carya illinoinensis HOM05D000096 ORTHO05D000045 8.9e-07 57.8 158 29.1
FvH4_6g14351 Fragaria vesca HOM05D000096 ORTHO05D000045 8.9e-07 57.8 120 35.8
Oeu043848.1 Olea europaea HOM05D000096 ORTHO05D000045 8.9e-07 57.8 93 32.3
Oeu041800.1 Olea europaea HOM05D000096 ORTHO05D000045 1.5e-06 57.0 105 32.4
CAN.G205.1 Capsicum annuum HOM05D000096 ORTHO05D000045 2.0e-06 56.6 117 30.8
AUR62041752 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.0e-06 56.6 156 29.5
AUR62044577 Chenopodium quinoa HOM05D000096 ORTHO05D000045 2.0e-06 56.6 156 29.5
QL04p091343 Quercus lobata HOM05D000096 ORTHO05D000045 2.0e-06 56.6 172 27.9
CAN.G97.48 Capsicum annuum HOM05D000096 ORTHO05D000045 2.6e-06 56.2 105 31.4
Oeu034682.1 Olea europaea HOM05D000096 ORTHO05D000045 3.4e-06 55.8 91 34.1
PGSC0003DMG400006247 Solanum tuberosum HOM05D011468 ORTHO05D012657 4.4e-06 55.5 105 31.4
TPR.G18330 Trifolium pratense HOM05D000096 ORTHO05D000045 4.4e-06 55.5 147 28.6
AUR62041682 Chenopodium quinoa HOM05D000096 ORTHO05D000045 7.6e-06 54.7 120 33.3
SGA_v2.0_scaffold202G41441 Striga asiatica HOM05D000096 ORTHO05D000045 9.9e-06 54.3 151 28.5


User provided reference genes

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