Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 2.1e-49 198.7 100 100.0
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 1.5e-47 192.6 96 100.0
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 1.1e-37 159.8 96 85.4
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 8.9e-37 156.8 96 83.3
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 1.5e-36 156.0 96 81.2
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 4.4e-36 154.5 96 80.2
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 7.6e-36 153.7 93 81.7
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 7.6e-36 153.7 93 81.7
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 7.6e-36 153.7 97 80.4
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 1.3e-35 152.9 96 79.2
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 2.2e-35 152.1 96 80.2
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 2.9e-35 151.8 96 79.2
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 3.8e-35 151.4 96 79.2
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 4.9e-35 151.0 96 80.2
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 6.4e-35 150.6 96 79.2
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 6.4e-35 150.6 96 77.1
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 8.4e-35 150.2 96 75.0
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 8.4e-35 150.2 96 78.1
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 1.4e-34 149.4 96 77.1
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 1.9e-34 149.1 96 76.0
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 1.9e-34 149.1 96 78.1
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 2.4e-34 148.7 96 75.0
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 3.2e-34 148.3 96 77.1
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 4.2e-34 147.9 96 77.1
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 5.4e-34 147.5 93 79.6
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 7.1e-34 147.1 93 76.3
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 7.1e-34 147.1 93 76.3
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 7.1e-34 147.1 96 76.0
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 7.1e-34 147.1 96 76.0
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 9.2e-34 146.7 95 75.8
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 9.2e-34 146.7 96 76.0
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 9.2e-34 146.7 96 75.0
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 1.2e-33 146.4 93 75.3
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 1.2e-33 146.4 96 74.0
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 1.6e-33 146.0 96 76.0
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 2.1e-33 145.6 96 75.0
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 2.1e-33 145.6 96 75.0
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 2.1e-33 145.6 96 75.0
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 2.1e-33 145.6 96 76.0
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 2.7e-33 145.2 93 76.3
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 3.5e-33 144.8 93 75.3
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 3.5e-33 144.8 93 75.3
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 3.5e-33 144.8 94 75.5
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 3.5e-33 144.8 96 74.0
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 7.8e-33 143.7 96 72.9
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 7.8e-33 143.7 96 75.0
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 7.8e-33 143.7 98 72.4
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 1.3e-32 142.9 93 75.3
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 1.3e-32 142.9 96 72.9
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 1.7e-32 142.5 94 76.6
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 2.3e-32 142.1 96 71.9
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 2.3e-32 142.1 96 72.9
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 2.3e-32 142.1 93 74.2
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 2.3e-32 142.1 96 72.9
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 8.7e-32 140.2 96 74.0
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 1.1e-31 139.8 93 72.0
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 1.1e-31 139.8 93 72.0
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 1.9e-31 139.0 97 70.1
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 2.5e-31 138.7 97 70.1
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 3.3e-31 138.3 93 71.0
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 5.6e-31 137.5 93 71.0
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 9.6e-31 136.7 96 69.8
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 1.6e-30 136.0 93 74.2
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.1e-30 135.6 90 72.2
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 3.6e-30 134.8 93 73.1
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 8.1e-30 133.7 97 73.2
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 1.1e-29 133.3 96 69.8
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 1.4e-29 132.9 94 66.0
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 1.8e-29 132.5 96 69.8
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 1.8e-29 132.5 97 72.2
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 2.4e-29 132.1 95 68.4
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.4e-29 132.1 95 69.5
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 4.0e-29 131.3 96 69.8
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 4.0e-29 131.3 95 68.4
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 6.9e-29 130.6 96 66.7
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 6.9e-29 130.6 97 66.0
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 9.0e-29 130.2 91 70.3
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 9.0e-29 130.2 93 69.9
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 1.5e-28 129.4 95 67.4
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 5.8e-28 127.5 95 66.3
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 2.9e-27 125.2 93 64.5
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 4.9e-27 124.4 77 80.5
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 1.1e-26 123.2 96 64.6
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 7.1e-26 120.6 81 72.8
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 9.3e-26 120.2 95 62.1
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.5e-25 118.2 91 64.8
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 1.0e-24 116.7 132 54.5
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.3e-24 116.3 96 65.6
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 6.6e-24 114.0 93 63.4
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 4.3e-23 111.3 81 66.7
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 7.3e-23 110.5 161 42.9
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 1.3e-22 109.8 81 65.4
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 3.6e-22 108.2 82 63.4
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 3.6e-22 108.2 95 55.8
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 8.1e-22 107.1 98 62.2
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 1.8e-21 105.9 93 54.8
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 1.8e-21 105.9 69 75.4
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 1.8e-21 105.9 64 82.8
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 2.4e-21 105.5 66 78.8
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 2.0e-20 102.4 96 57.3
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 2.9e-19 98.6 96 58.3
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 1.1e-18 96.7 64 73.4
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 1.6e-17 92.8 95 49.5
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.6e-17 92.8 96 55.2
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 1.6e-17 92.8 95 53.7
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 2.1e-17 92.4 93 52.7
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 7.9e-17 90.5 93 54.8
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 1.0e-16 90.1 96 51.0
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 2.1e-14 82.4 56 66.1
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.4e-13 79.0 82 46.3
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 3.1e-13 78.6 107 45.8
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 3.2e-10 68.6 53 60.4
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 1.6e-09 66.2 43 74.4
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 1.3e-08 63.2 40 75.0
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 1.5e-07 59.7 69 43.5
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 2.5e-07 58.9 43 65.1


User provided reference genes

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