Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02475 Striga asiatica HOM05D007109 ORTHO05D008813 1.5e-150 536.2 274 100.0
Migut.B01259 Erythranthe guttata HOM05D007109 ORTHO05D008813 2.3e-58 229.9 300 44.3
MSTRG.20556 Avicennia marina HOM05D007109 ORTHO05D008813 1.5e-57 227.3 295 47.5
Migut.B01258 Erythranthe guttata HOM05D007109 ORTHO05D008813 1.4e-55 220.7 310 44.5
MSTRG.17005 Avicennia marina HOM05D007109 ORTHO05D008813 6.4e-53 211.8 299 44.1
Oeu014598.1 Olea europaea HOM05D007109 ORTHO05D008813 3.2e-44 183.0 296 40.2
MSTRG.5044 Avicennia marina HOM05D007109 ORTHO05D008813 7.9e-43 178.3 312 39.4
SalBow5G4816 Salvia bowleyana HOM05D007109 ORTHO05D008813 2.8e-40 169.9 281 41.6
SalBow5G4465 Salvia bowleyana HOM05D007109 ORTHO05D008813 3.1e-39 166.4 287 40.4
Dinv07428 Davidia involucrata HOM05D007109 ORTHO05D008813 1.2e-38 164.5 287 38.3
Cfa010821 Carpinus fangiana HOM05D007109 ORTHO05D008813 1.7e-37 160.6 309 36.6
Nitab4.5_0001244g0020 Nicotiana tabacum HOM05D007109 ORTHO05D008813 4.9e-37 159.1 310 36.8
CAN.G909.14 Capsicum annuum HOM05D007109 ORTHO05D008813 1.2e-35 154.5 314 35.4
Sopen01g034880 Solanum pennellii HOM05D007109 ORTHO05D008813 3.5e-35 152.9 288 36.8
Nitab4.5_0004222g0010 Nicotiana tabacum HOM05D007109 ORTHO05D008813 1.3e-34 151.0 312 35.9
PGSC0003DMG400041994 Solanum tuberosum HOM05D007109 ORTHO05D008813 5.1e-34 149.1 295 35.9
PGSC0003DMG402006771 Solanum tuberosum HOM05D007109 ORTHO05D008813 5.1e-34 149.1 295 35.9
Potri.009G055800 Populus trichocarpa HOM05D007109 ORTHO05D008813 8.7e-34 148.3 307 34.9
Cc02_g28960 Coffea canephora HOM05D007109 ORTHO05D008813 1.1e-33 147.9 308 34.1
CiPaw.15G135600 Carya illinoinensis HOM05D007109 ORTHO05D008813 1.5e-33 147.5 308 35.4
CiPaw.14G003600 Carya illinoinensis HOM05D007109 ORTHO05D008813 1.3e-32 144.4 308 34.4
SGA_v2.0_scaffold354G49753 Striga asiatica HOM05D007109 ORTHO05D008813 1.3e-32 144.4 312 35.9
Sabra09G0040900 Salix brachista HOM05D007109 ORTHO05D008813 2.1e-32 143.7 306 35.3
arahy.Tifrunner.gnm1.ann1.K9M8RY Arachis hypogaea HOM05D007109 ORTHO05D008813 4.8e-32 142.5 330 32.1
CiPaw.13G008200 Carya illinoinensis HOM05D007109 ORTHO05D008813 6.2e-32 142.1 304 33.9
Phvul.005G036000 Phaseolus vulgaris HOM05D007109 ORTHO05D008813 1.8e-31 140.6 307 34.5
Lalb_Chr01g0000491 Lupinus albus HOM05D007109 ORTHO05D008813 2.4e-31 140.2 289 34.6
Atru.chr11.2527 Acer truncatum HOM05D007109 ORTHO05D008813 4.0e-31 139.4 328 32.3
Ciclev10032181m.g Citrus clementina HOM05D007109 ORTHO05D008813 4.0e-31 139.4 307 32.6
Peaxi162Scf01108g00310 Petunia axillaris HOM05D007109 ORTHO05D008813 1.5e-30 137.5 301 34.2
Ca_26440_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 3.4e-30 136.3 305 35.4
QL04p010443 Quercus lobata HOM05D007109 ORTHO05D008813 3.4e-30 136.3 319 32.6
Prupe.2G023200 Prunus persica HOM05D007109 ORTHO05D008813 7.6e-30 135.2 309 32.0
Duzib138G1369 Durio zibethinus HOM05D007109 ORTHO05D008813 2.2e-29 133.7 307 31.9
Lj3g0012595 Lotus japonicus HOM05D007109 ORTHO05D008813 2.2e-29 133.7 339 31.3
TPR.G8349 Trifolium pratense HOM05D007109 ORTHO05D008813 8.4e-29 131.7 318 31.4
Glyma.04G142400 Glycine max HOM05D007109 ORTHO05D008813 1.4e-28 131.0 309 33.0
Glyma.11G159021 Glycine max HOM05D007109 ORTHO05D008813 1.4e-28 131.0 313 35.1
MD07G1022700 Malus domestica HOM05D007109 ORTHO05D008813 7.1e-28 128.6 310 31.9
Psat7g150920 Pisum sativum HOM05D007109 ORTHO05D008813 1.2e-27 127.9 309 34.3
Duzib268G1698 Durio zibethinus HOM05D007109 ORTHO05D008813 2.7e-27 126.7 290 32.1
Medtr3g028060 Medicago truncatula HOM05D007109 ORTHO05D008813 2.7e-27 126.7 303 33.0
COL.COLO4_12331 Corchorus olitorius HOM05D007109 ORTHO05D008813 3.5e-27 126.3 305 32.1
Manes.10G135500 Manihot esculenta HOM05D007109 ORTHO05D008813 4.6e-27 125.9 288 31.6
Oeu049473.1 Olea europaea HOM05D007109 ORTHO05D008813 6.0e-27 125.6 297 31.6
THA.LOC104827430 Tarenaya hassleriana HOM05D007109 ORTHO05D008813 6.0e-27 125.6 300 30.7
Thecc.01G404600 Theobroma cacao HOM05D007109 ORTHO05D008813 1.0e-26 124.8 307 30.9
unitig_22.g5431 Utricularia gibba HOM05D007109 ORTHO05D008813 1.0e-26 124.8 285 31.2
RcHm_v2.0_Chr1g0318291 Rosa chinensis HOM05D007109 ORTHO05D008813 1.8e-26 124.0 315 31.4
Medtr0003s0580 Medicago truncatula HOM05D007109 ORTHO05D008813 3.0e-26 123.2 314 30.6
Duzib133G0385 Durio zibethinus HOM05D007109 ORTHO05D008813 3.9e-26 122.9 306 29.7
TPR.G14571 Trifolium pratense HOM05D007109 ORTHO05D008813 3.9e-26 122.9 292 32.9
Solyc01g087980.4 Solanum lycopersicum HOM05D007109 ORTHO05D008813 5.1e-26 122.5 274 33.2
VMungo1080G0219 Vigna mungo HOM05D007109 ORTHO05D008813 5.1e-26 122.5 221 38.0
FAN03G1693 Fragaria x ananassa HOM05D007109 ORTHO05D008813 8.7e-26 121.7 313 29.7
Gorai.004G169100 Gossypium raimondii HOM05D007109 ORTHO05D008813 8.7e-26 121.7 309 30.4
Lj3g0020735 Lotus japonicus HOM05D007109 ORTHO05D008813 8.7e-26 121.7 277 33.6
Actinidia19426 Actinidia chinensis HOM05D007109 ORTHO05D008813 1.1e-25 121.3 311 30.9
Lalb_Chr25g0282601 Lupinus albus HOM05D007109 ORTHO05D008813 1.9e-25 120.6 301 31.9
Gohir.D08G162700 Gossypium hirsutum HOM05D007109 ORTHO05D008813 3.3e-25 119.8 307 30.3
Ca_27474_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 4.3e-25 119.4 293 34.1
FvH4_7g01730 Fragaria vesca HOM05D007109 ORTHO05D008813 5.7e-25 119.0 312 29.5
FAN06G2427 Fragaria x ananassa HOM05D007109 ORTHO05D008813 5.7e-25 119.0 312 29.5
MD02G1301300 Malus domestica HOM05D007109 ORTHO05D008813 9.7e-25 118.2 313 30.7
MD07G1022600 Malus domestica HOM05D007109 ORTHO05D008813 1.6e-24 117.5 313 31.0
Hma1.2p1_0269F.1_g107760 Hydrangea macrophylla HOM05D007109 ORTHO05D008813 2.8e-24 116.7 300 34.0
Rhsim01G0124900 Rhododendron simsii HOM05D007109 ORTHO05D008813 4.8e-24 115.9 289 33.2
Rhsim07G0059100 Rhododendron simsii HOM05D007109 ORTHO05D008813 1.8e-23 114.0 318 31.1
vmacro13701 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 3.1e-23 113.2 311 30.9
Manes.07G011500 Manihot esculenta HOM05D007109 ORTHO05D008813 1.2e-22 111.3 305 29.8
Nn7g36341 Nelumbo nucifera HOM05D007109 ORTHO05D008813 2.0e-22 110.5 305 30.8
Sed0019738 Sechium edule HOM05D007109 ORTHO05D008813 2.0e-22 110.5 286 31.5
ClCG10G012150 Citrullus lanatus HOM05D007109 ORTHO05D008813 2.6e-22 110.2 287 31.4
vmacro13699 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 2.6e-22 110.2 310 31.3
TWI73G0029 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 3.4e-22 109.8 312 29.8
Lsat_1_v5_gn_1_104740 Lactuca sativa HOM05D007109 ORTHO05D008813 4.5e-22 109.4 239 32.2
Cpa.g.c33908 Carica papaya HOM05D007109 ORTHO05D008813 5.9e-22 109.0 286 30.1
Sed0006814 Sechium edule HOM05D007109 ORTHO05D008813 5.9e-22 109.0 296 32.4
Cpa.g.sc125.54 Carica papaya HOM05D007109 ORTHO05D008813 1.7e-21 107.5 286 30.1
CANSAT80G2748 Cannabis sativa HOM05D007109 ORTHO05D008813 5.0e-21 105.9 304 31.6
Eucgr.G03285 Eucalyptus grandis HOM05D007109 ORTHO05D008813 5.0e-21 105.9 286 31.1
MELO3C024000.2 Cucumis melo HOM05D007109 ORTHO05D008813 8.5e-21 105.1 278 32.0
CsaV3_7G030690 Cucumis sativus L. HOM05D007109 ORTHO05D008813 1.1e-20 104.8 237 32.1
ECA248G3518 Erigeron canadensis HOM05D007109 ORTHO05D008813 4.2e-20 102.8 276 31.2
Ah.10g038560 Amaranthus hybridus HOM05D007109 ORTHO05D008813 2.7e-19 100.1 301 30.9
AUR62009423 Chenopodium quinoa HOM05D007109 ORTHO05D008813 2.7e-19 100.1 302 28.5
Medtr3g034370 Medicago truncatula HOM05D007109 ORTHO05D008813 2.7e-19 100.1 288 30.6
TAR633G0887 Trochodendron aralioides HOM05D007109 ORTHO05D008813 3.6e-19 99.8 280 28.9
Lsat_1_v5_gn_1_104720 Lactuca sativa HOM05D007109 ORTHO05D008813 6.1e-19 99.0 239 29.7
TWI09G0588 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 6.1e-19 99.0 304 28.0
FAN10G2826 Fragaria x ananassa HOM05D007109 ORTHO05D008813 7.9e-19 98.6 258 31.0
Actinidia23253 Actinidia chinensis HOM05D007109 ORTHO05D008813 1.0e-18 98.2 250 33.6
AUR62023101 Chenopodium quinoa HOM05D007109 ORTHO05D008813 3.9e-18 96.3 294 28.9
ClCG09G004450 Citrullus lanatus HOM05D007109 ORTHO05D008813 1.1e-17 94.7 304 28.3
Sed0007712 Sechium edule HOM05D007109 ORTHO05D008813 3.3e-17 93.2 283 28.6
Sed0023192 Sechium edule HOM05D007109 ORTHO05D008813 3.3e-17 93.2 300 30.0
HanXRQChr01g0007891 Helianthus annuus HOM05D007109 ORTHO05D008813 9.7e-17 91.7 272 28.3
Gohir.A08G141600 Gossypium hirsutum HOM05D007109 ORTHO05D008813 1.1e-15 88.2 291 30.2
MELO3C023587.2 Cucumis melo HOM05D007109 ORTHO05D008813 3.1e-15 86.7 233 29.2
Medtr3g034410 Medicago truncatula HOM05D007109 ORTHO05D008813 1.7e-13 80.9 293 27.0
Solyc04g050200.1 Solanum lycopersicum HOM05D007109 ORTHO05D008813 2.3e-10 70.5 105 38.1
Sc14g0004980 Simmondsia chinensis HOM05D007109 ORTHO05D008813 1.1e-09 68.2 314 26.1
SalBow1G2857 Salvia bowleyana HOM05D007109 ORTHO05D008813 2.8e-08 63.5 68 47.1
CsaV3_3G031910 Cucumis sativus L. HOM05D007109 ORTHO05D008813 1.4e-07 61.2 124 36.3
Gohir.A12G100450 Gossypium hirsutum HOM05D007109 ORTHO05D008813 1.2e-06 58.2 66 39.4
TPR.G40170 Trifolium pratense HOM05D007109 ORTHO05D008813 1.5e-06 57.8 73 43.8
Actinidia08354 Actinidia chinensis HOM05D007109 ORTHO05D008813 4.5e-06 56.2 118 34.7
Actinidia25349 Actinidia chinensis HOM05D007109 ORTHO05D008813 4.5e-06 56.2 118 34.7
Medtr3g034540 Medicago truncatula HOM05D007109 ORTHO05D008813 5.9e-06 55.8 112 32.1


User provided reference genes

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