Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 1.4e-101 372.9 181 100.0
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 2.7e-76 288.9 179 76.0
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 7.4e-74 280.8 170 78.8
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 2.2e-73 279.3 171 74.9
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.9e-71 271.2 173 72.3
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 2.9e-70 268.9 166 72.9
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 3.8e-70 268.5 173 71.1
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 5.0e-70 268.1 165 73.3
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 1.9e-69 266.2 171 71.3
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 9.4e-69 263.8 170 72.9
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 8.0e-68 260.8 159 73.0
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 1.8e-67 259.6 174 70.1
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 3.0e-67 258.8 158 72.2
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 8.8e-67 257.3 170 71.8
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 3.3e-66 255.4 170 70.0
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 7.4e-66 254.2 154 74.7
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 7.4e-66 254.2 163 71.8
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 2.2e-65 252.7 174 69.5
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 3.7e-65 251.9 171 69.0
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 4.8e-65 251.5 166 69.3
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 1.8e-64 249.6 153 73.2
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 1.8e-64 249.6 154 72.7
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 2.4e-64 249.2 153 72.5
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 3.1e-64 248.8 156 73.1
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 3.1e-64 248.8 169 68.0
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 3.1e-64 248.8 167 69.5
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 4.1e-64 248.4 160 69.4
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 4.1e-64 248.4 155 72.3
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 4.1e-64 248.4 160 70.0
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 4.1e-64 248.4 167 68.9
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 7.0e-64 247.7 162 67.9
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 7.0e-64 247.7 166 68.1
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 9.1e-64 247.3 166 68.7
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 9.1e-64 247.3 162 70.4
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 9.1e-64 247.3 170 67.1
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 1.2e-63 246.9 164 70.7
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 1.6e-63 246.5 163 68.1
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 1.6e-63 246.5 164 68.9
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 2.0e-63 246.1 165 70.3
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 2.6e-63 245.7 167 68.9
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 4.5e-63 245.0 153 72.5
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 5.9e-63 244.6 156 69.2
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 1.3e-62 243.4 165 67.9
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 2.9e-62 242.3 151 70.2
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 2.9e-62 242.3 159 68.6
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 3.8e-62 241.9 169 65.7
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 5.0e-62 241.5 165 66.1
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 5.0e-62 241.5 157 68.2
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 6.5e-62 241.1 163 66.3
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 6.5e-62 241.1 157 70.1
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 6.5e-62 241.1 156 67.3
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 8.5e-62 240.7 155 70.3
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 1.5e-61 240.0 163 66.9
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 1.9e-61 239.6 163 66.3
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 1.9e-61 239.6 153 70.6
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 3.2e-61 238.8 197 59.9
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 3.2e-61 238.8 161 66.5
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 4.2e-61 238.4 164 65.9
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 4.2e-61 238.4 164 65.9
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 5.5e-61 238.0 161 65.2
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 7.2e-61 237.7 167 65.3
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 1.2e-60 236.9 163 65.6
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 1.2e-60 236.9 166 65.1
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 1.2e-60 236.9 166 65.1
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 1.6e-60 236.5 167 64.1
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.6e-60 236.5 167 64.1
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 2.7e-60 235.7 163 65.0
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 3.6e-60 235.3 165 66.7
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 3.6e-60 235.3 164 65.9
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 3.6e-60 235.3 170 62.9
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 3.6e-60 235.3 163 65.0
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 6.1e-60 234.6 173 61.8
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 1.0e-59 233.8 155 68.4
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 1.0e-59 233.8 163 66.3
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 4.0e-59 231.9 155 63.9
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 6.7e-59 231.1 167 62.3
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 1.2e-58 230.3 146 69.2
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.2e-58 230.3 167 62.3
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 1.2e-58 230.3 153 65.4
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 2.6e-58 229.2 176 60.8
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 2.6e-58 229.2 142 70.4
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 5.7e-58 228.0 163 60.7
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 7.5e-58 227.6 156 65.4
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 3.7e-57 225.3 181 60.8
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 3.1e-56 222.2 161 63.4
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 1.2e-55 220.3 137 70.8
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 8.8e-51 204.1 123 74.0
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 7.5e-50 201.1 152 57.9
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 1.3e-49 200.3 161 59.0
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 8.3e-49 197.6 195 53.3
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 1.7e-46 189.9 118 71.2
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 2.9e-46 189.1 152 63.8
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 5.0e-46 188.3 129 65.1
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 1.5e-45 186.8 127 62.2
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 7.2e-45 184.5 162 58.0
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 1.6e-44 183.3 133 63.2
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 1.8e-43 179.9 173 52.0
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 4.0e-43 178.7 149 53.7
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 5.2e-43 178.3 156 53.2
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 3.5e-39 165.6 156 57.7
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 7.3e-37 157.9 153 54.9
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 4.1e-32 142.1 109 60.6
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.6e-28 130.2 101 62.4
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-28 128.6 92 58.7
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 4.0e-27 125.6 114 52.6
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 1.5e-26 123.6 77 68.8
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 3.5e-23 112.5 71 71.8
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 4.0e-11 72.4 50 62.0
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 5.8e-10 68.6 38 84.2
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 9.9e-10 67.8 36 80.6
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 1.1e-08 64.3 63 49.2
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 1.1e-08 64.3 35 77.1
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 5.4e-08 62.0 43 65.1
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 1.6e-07 60.5 36 69.4
TPR.G26213 Trifolium pratense HOM05D006982 ORTHO05D008909 4.6e-07 58.9 46 60.9


User provided reference genes

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