Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02406 Striga asiatica HOM05D005710 ORTHO05D004657 2.6e-205 718.8 397 100.0
SGA_v2.0_scaffold52G19180 Striga asiatica HOM05D005710 ORTHO05D004657 6.1e-106 388.7 424 59.7
Migut.K01286 Erythranthe guttata HOM05D005710 ORTHO05D004657 4.7e-66 256.1 375 49.1
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 3.5e-61 240.0 364 47.8
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 1.5e-56 224.6 390 43.6
Cc07_g04040 Coffea canephora HOM05D005710 ORTHO05D004657 1.4e-49 201.4 368 40.5
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 5.2e-49 199.5 405 37.8
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 2.4e-46 190.7 390 36.2
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 9.2e-46 188.7 395 37.7
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 9.2e-46 188.7 370 39.7
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 1.2e-45 188.3 390 37.4
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 2.1e-45 187.6 398 37.2
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 3.0e-44 183.7 401 36.7
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 1.6e-42 177.9 385 36.6
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 1.6e-42 177.9 417 33.3
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 8.1e-42 175.6 416 34.1
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 3.1e-41 173.7 400 37.8
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 4.0e-41 173.3 421 34.0
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 8.9e-41 172.2 362 35.9
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 1.2e-40 171.8 377 34.7
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 2.6e-40 170.6 407 34.4
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 7.6e-40 169.1 383 36.6
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 7.6e-40 169.1 395 35.9
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 9.9e-40 168.7 380 35.0
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 1.7e-39 167.9 361 37.1
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 2.2e-39 167.5 391 37.9
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 3.7e-39 166.8 343 37.0
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 4.9e-39 166.4 401 36.9
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 1.1e-38 165.2 343 37.0
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 1.1e-38 165.2 352 37.8
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 4.1e-38 163.3 373 33.5
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 5.4e-38 162.9 376 35.1
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 2.7e-37 160.6 365 36.7
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 3.5e-37 160.2 367 34.3
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 1.7e-36 157.9 397 34.8
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 6.6e-36 156.0 254 40.2
Nitab4.5_0008213g0040 Nicotiana tabacum HOM05D005710 ORTHO05D004657 1.5e-35 154.8 414 35.5
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 1.9e-35 154.5 418 33.3
Nitab4.5_0000565g0150 Nicotiana tabacum HOM05D005710 ORTHO05D004657 7.3e-35 152.5 398 34.7
ECA246G0940 Erigeron canadensis HOM05D005710 ORTHO05D004657 9.6e-35 152.1 365 34.8
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 2.1e-34 151.0 421 32.5
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 2.8e-34 150.6 411 34.1
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 8.1e-34 149.1 391 32.0
CsaV3_5G038440 Cucumis sativus L. HOM05D005710 ORTHO05D004657 1.4e-33 148.3 355 34.6
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 1.8e-33 147.9 257 38.9
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 1.8e-33 147.9 352 33.8
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 3.1e-33 147.1 319 38.2
MELO3C022025.2 Cucumis melo HOM05D005710 ORTHO05D004657 4.0e-33 146.7 353 34.8
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 8.9e-33 145.6 394 32.7
Migut.K01288 Erythranthe guttata HOM05D005710 ORTHO05D004657 1.2e-32 145.2 272 41.5
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.2e-32 145.2 305 38.4
Lalb_Chr17g0337061 Lupinus albus HOM05D005710 ORTHO05D004657 2.0e-32 144.4 386 34.2
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.6e-32 144.1 246 40.2
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 2.6e-32 144.1 246 40.2
Sed0007565 Sechium edule HOM05D005710 ORTHO05D004657 3.4e-32 143.7 403 33.7
Sc11g0004700 Simmondsia chinensis HOM05D005710 ORTHO05D004657 5.8e-32 142.9 360 34.2
AUR62018163 Chenopodium quinoa HOM05D005710 ORTHO05D004657 1.3e-31 141.7 257 40.9
PGR004G2722 Punica granatum HOM05D005710 ORTHO05D004657 1.3e-31 141.7 354 34.7
Ah.10g032010 Amaranthus hybridus HOM05D005710 ORTHO05D004657 2.2e-31 141.0 372 33.1
Peaxi162Scf00166g00643 Petunia axillaris HOM05D005710 ORTHO05D004657 2.2e-31 141.0 358 35.5
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 4.9e-31 139.8 405 33.1
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 4.9e-31 139.8 315 37.8
Hund13162 Selenicereus undatus HOM05D005710 ORTHO05D004657 8.4e-31 139.0 262 38.9
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 1.1e-30 138.7 394 32.7
CAN.G206.210 Capsicum annuum HOM05D005710 ORTHO05D004657 2.4e-30 137.5 363 31.4
Medtr7g012940 Medicago truncatula HOM05D005710 ORTHO05D004657 3.2e-30 137.1 373 34.3
Glyma.18G264900 Glycine max HOM05D005710 ORTHO05D004657 1.7e-28 131.3 392 33.4
EL10Ac2g03101 Beta vulgaris HOM05D005710 ORTHO05D004657 2.3e-28 131.0 304 37.2
Glyma.08G242700 Glycine max HOM05D005710 ORTHO05D004657 2.3e-28 131.0 358 33.2
TPR.G33463 Trifolium pratense HOM05D005710 ORTHO05D004657 2.3e-28 131.0 370 34.9
AUR62042434 Chenopodium quinoa HOM05D005710 ORTHO05D004657 6.6e-28 129.4 202 45.0
VMungo1383G0251 Vigna mungo HOM05D005710 ORTHO05D004657 1.1e-27 128.6 388 32.5
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 1.5e-27 128.3 256 40.6
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 9.6e-27 125.6 380 30.8
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 9.6e-27 125.6 373 34.3
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 1.3e-26 125.2 381 33.9
Solyc02g088660.4 Solanum lycopersicum HOM05D005710 ORTHO05D004657 3.6e-26 123.6 147 50.3
SalBow2G0426 Salvia bowleyana HOM05D005710 ORTHO05D004657 5.3e-25 119.8 138 50.7
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 2.6e-24 117.5 332 32.8
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.3e-23 115.2 273 36.3
Hund15554 Selenicereus undatus HOM05D005710 ORTHO05D004657 1.7e-23 114.8 227 38.8
SalBow3G1747 Salvia bowleyana HOM05D005710 ORTHO05D004657 6.4e-23 112.8 157 42.7
Phvul.008G035100 Phaseolus vulgaris HOM05D005710 ORTHO05D004657 1.1e-22 112.1 386 31.6
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 5.4e-22 109.8 264 34.5
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 7.1e-22 109.4 273 33.3
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 1.2e-21 108.6 212 36.8
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 1.2e-21 108.6 382 30.6
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 1.2e-21 108.6 382 30.6
ClCG11G004670 Citrullus lanatus HOM05D005710 ORTHO05D004657 1.2e-21 108.6 356 31.5
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 1.6e-21 108.2 302 30.1
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 1.3e-20 105.1 245 34.3
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 1.1e-19 102.1 431 31.3
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.5e-19 101.7 286 29.7
CDE07G0246 Ceratophyllum demersum HOM05D001913 ORTHO05D001880 5.6e-19 99.8 144 38.9
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 7.3e-19 99.4 309 30.1
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 3.6e-18 97.1 383 29.8
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 3.6e-18 97.1 286 33.2
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 3.6e-18 97.1 383 29.8
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 3.6e-18 97.1 286 33.2
MBI16_g30408_MAGBIO Magnolia biondii HOM05D001913 ORTHO05D001880 6.2e-18 96.3 229 33.2
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 1.1e-17 95.5 294 32.0
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 5.3e-17 93.2 242 33.5
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 5.3e-17 93.2 242 33.5
Zm00001eb352990 Zea mays HOM05D005710 ORTHO05D004657 5.3e-17 93.2 114 49.1
Os05g0512400 Oryza sativa ssp. japonica HOM05D005710 ORTHO05D004657 1.2e-16 92.0 100 52.0
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 1.5e-16 91.7 192 38.0
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 2.0e-16 91.3 274 32.5
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 2.6e-16 90.9 227 36.1
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 2.6e-16 90.9 207 35.3
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 4.5e-16 90.1 240 33.3
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 5.8e-16 89.7 226 35.4
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 1.7e-15 88.2 237 32.5
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 1.7e-15 88.2 422 27.3
HPP92_019480 Vanilla planifolia HOM05D005710 ORTHO05D004657 7.9e-13 79.3 223 31.4
Oeu000861.1 Olea europaea HOM05D005710 ORTHO05D004657 2.4e-09 67.8 88 45.5
Oeu033388.1 Olea europaea HOM05D005710 ORTHO05D004657 1.0e-07 62.4 151 30.5


User provided reference genes

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