Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 3.6e-67 258.1 127 100.0
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 6.0e-62 240.7 127 91.3
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 6.4e-56 220.7 127 82.7
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 8.4e-56 220.3 127 81.9
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 1.1e-55 219.9 127 81.1
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 4.6e-54 214.5 127 79.5
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 4.6e-54 214.5 127 81.9
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.0e-53 213.4 127 81.9
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 6.6e-53 210.7 127 78.0
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.9e-52 209.1 122 83.6
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 5.6e-52 207.6 121 81.0
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 7.3e-52 207.2 127 75.6
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 6.2e-51 204.1 127 74.8
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 8.1e-51 203.8 127 74.0
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 2.4e-50 202.2 125 78.4
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 3.1e-50 201.8 126 77.0
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 3.1e-50 201.8 128 75.8
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 5.2e-50 201.1 126 76.2
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 2.0e-49 199.1 128 75.0
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.6e-49 198.7 124 76.6
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.6e-49 198.7 124 76.6
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.6e-49 198.7 123 78.9
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 4.4e-49 198.0 124 72.6
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 5.8e-49 197.6 128 76.6
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 5.8e-49 197.6 128 76.6
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 7.6e-49 197.2 128 75.8
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 7.6e-49 197.2 121 76.0
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 9.9e-49 196.8 128 75.0
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 9.9e-49 196.8 127 78.0
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.3e-48 196.4 128 75.8
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 3.8e-48 194.9 122 74.6
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 4.9e-48 194.5 125 76.8
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 8.4e-48 193.7 127 74.0
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 3.2e-47 191.8 127 73.2
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 5.4e-47 191.0 128 75.0
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 9.3e-47 190.3 125 77.6
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 1.6e-46 189.5 127 72.4
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 2.1e-46 189.1 127 75.6
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 3.5e-46 188.3 127 74.0
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 6.0e-46 187.6 128 72.7
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 6.0e-46 187.6 127 72.4
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 7.8e-46 187.2 124 70.2
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 3.0e-45 185.3 123 72.4
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 3.9e-45 184.9 127 72.4
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 6.6e-45 184.1 125 71.2
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 8.7e-45 183.7 125 71.2
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 8.7e-45 183.7 129 69.0
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 1.5e-44 183.0 125 72.0
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 1.9e-44 182.6 125 70.4
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.9e-44 182.6 125 71.2
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 2.5e-44 182.2 120 75.0
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 4.3e-44 181.4 125 66.4
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 5.6e-44 181.0 124 69.4
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 5.6e-44 181.0 127 67.7
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 5.6e-44 181.0 124 73.4
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 7.3e-44 180.6 127 72.4
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 9.6e-44 180.3 124 70.2
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 9.6e-44 180.3 124 68.5
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 9.6e-44 180.3 127 67.7
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.6e-43 179.5 124 72.6
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 1.6e-43 179.5 127 66.9
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.1e-43 179.1 124 69.4
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 2.8e-43 178.7 125 68.0
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 6.2e-43 177.6 123 68.3
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 6.2e-43 177.6 128 68.8
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 8.1e-43 177.2 124 71.8
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 1.1e-42 176.8 127 66.1
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 1.8e-42 176.0 125 68.0
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 1.8e-42 176.0 125 68.0
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 1.8e-42 176.0 124 70.2
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 2.4e-42 175.6 126 67.5
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 2.4e-42 175.6 125 67.2
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 2.4e-42 175.6 125 67.2
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 3.1e-42 175.3 125 69.6
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 5.3e-42 174.5 125 67.2
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 5.3e-42 174.5 129 67.4
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 5.3e-42 174.5 122 68.0
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 6.9e-42 174.1 129 68.2
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 1.2e-41 173.3 123 66.7
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 1.5e-41 172.9 127 63.0
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 2.0e-41 172.6 122 72.1
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 2.0e-41 172.6 123 66.7
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 4.5e-41 171.4 126 66.7
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 4.5e-41 171.4 124 68.5
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 5.8e-41 171.0 127 66.9
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 7.6e-41 170.6 127 67.7
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 9.9e-41 170.2 126 65.9
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 1.3e-40 169.9 128 64.8
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 65.6
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 1.7e-40 169.5 126 64.3
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 1.7e-40 169.5 103 78.6
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 2.9e-40 168.7 131 64.1
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 3.8e-40 168.3 127 62.2
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 4.9e-40 167.9 125 64.8
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 4.9e-40 167.9 125 64.8
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 8.4e-40 167.2 128 64.1
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 8.4e-40 167.2 127 62.2
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 8.4e-40 167.2 126 65.9
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 1.4e-39 166.4 124 65.3
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 1.9e-39 166.0 124 65.3
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 2.4e-39 165.6 122 68.0
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 3.2e-39 165.2 126 65.1
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 5.4e-39 164.5 128 67.2
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 9.3e-39 163.7 130 63.1
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 2.7e-38 162.2 121 66.1
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 4.6e-38 161.4 126 64.3
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 1.5e-36 156.4 126 62.7
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 1.5e-36 156.4 126 62.7
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 1.9e-36 156.0 129 59.7
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.3e-36 155.2 127 62.2
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 1.8e-34 149.4 124 58.9
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 2.0e-33 146.0 127 60.6
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 4.5e-33 144.8 127 56.7
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 1.0e-29 133.7 127 56.7
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 5.6e-28 127.9 97 62.9
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 5.6e-28 127.9 80 73.8
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 5.6e-28 127.9 115 58.3
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 7.4e-28 127.5 100 62.0
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 3.7e-27 125.2 81 70.4
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 8.2e-27 124.0 115 57.4
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 4.9e-24 114.8 79 72.2
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 3.2e-23 112.1 67 77.6
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 3.1e-18 95.5 120 45.8
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 1.2e-17 93.6 134 39.6
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 5.9e-17 91.3 66 65.2
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 2.2e-16 89.4 72 62.5
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 6.5e-16 87.8 124 44.4
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 1.4e-15 86.7 76 48.7
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 1.9e-15 86.3 74 56.8
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.6e-14 83.2 76 55.3
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 6.1e-14 81.3 103 46.6
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 1.4e-13 80.1 125 36.8
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 7.4e-12 74.3 127 35.4
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 1.7e-11 73.2 99 38.4
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 4.8e-11 71.6 132 34.1
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 3.1e-10 68.9 114 39.5
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 3.1e-10 68.9 64 60.9
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 1.9e-07 59.7 79 36.7


User provided reference genes

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