Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02364 Striga asiatica HOM05D007347 ORTHO05D009296 1.1e-134 483.8 353 100.0
SGA_v2.0_scaffold204G41666 Striga asiatica HOM05D007347 ORTHO05D009296 1.9e-57 227.3 122 93.4
Migut.H00560 Erythranthe guttata HOM05D007347 ORTHO05D009296 1.4e-39 167.9 125 64.8
Eucgr.I02100 Eucalyptus grandis HOM05D007347 ORTHO05D009296 1.9e-33 147.5 120 56.7
Prupe.6G186200 Prunus persica HOM05D007347 ORTHO05D009296 7.3e-33 145.6 120 58.3
MD15G1324700 Malus domestica HOM05D007347 ORTHO05D009296 5.2e-31 139.4 120 57.5
CAN.G71.18 Capsicum annuum HOM05D007347 ORTHO05D009296 8.9e-31 138.7 125 52.8
Solyc04g050550.3 Solanum lycopersicum HOM05D007347 ORTHO05D009296 8.9e-31 138.7 135 50.4
Sopen04g021380 Solanum pennellii HOM05D007347 ORTHO05D009296 4.4e-30 136.3 135 49.6
Peaxi162Scf00004g02628 Petunia axillaris HOM05D007347 ORTHO05D009296 5.8e-30 136.0 114 56.1
COL.COLO4_37044 Corchorus olitorius HOM05D007347 ORTHO05D009296 1.7e-29 134.4 120 55.0
COL.COLO4_23655 Corchorus olitorius HOM05D007347 ORTHO05D009296 4.9e-29 132.9 120 54.2
Atru.chr10.1870 Acer truncatum HOM05D007347 ORTHO05D009296 1.9e-28 131.0 114 54.4
Sed0006376 Sechium edule HOM05D007347 ORTHO05D009296 1.9e-25 120.9 130 47.7
MSTRG.24902 Avicennia marina HOM05D007347 ORTHO05D009296 3.3e-25 120.2 90 58.9
DCAR_010986 Daucus carota HOM05D007347 ORTHO05D009296 6.8e-23 112.5 243 60.9
CsaV3_5G013240 Cucumis sativus L. HOM05D007347 ORTHO05D009296 1.5e-22 111.3 122 45.9
MELO3C026797.2 Cucumis melo HOM05D007347 ORTHO05D009296 2.6e-22 110.5 122 45.1
Psat4g145840 Pisum sativum HOM05D007347 ORTHO05D009296 5.8e-22 109.4 108 49.1
CDE05G1387 Ceratophyllum demersum HOM05D007347 ORTHO05D009296 4.1e-20 103.2 124 38.7
Glyma.15G236300 Glycine max HOM05D007347 ORTHO05D009296 2.1e-19 100.9 108 43.5
BcaB06g27240 Brassica carinata HOM05D007347 ORTHO05D009296 4.6e-19 99.8 101 51.5
CSS0000287 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 7.8e-19 99.0 83 54.2
CSS0049471 Camellia sinensis var. sinensis HOM05D007347 ORTHO05D009296 7.8e-19 99.0 83 54.2
SGA_v2.0_scaffold204G41677 Striga asiatica HOM05D007347 ORTHO05D009296 1.5e-17 94.7 131 47.3
SalBow1G8225 Salvia bowleyana HOM05D007347 ORTHO05D009296 1.9e-17 94.4 64 70.3
Ciclev10011342m.g Citrus clementina HOM05D007347 ORTHO05D009296 8.9e-15 85.5 63 58.7
Oeu033427.1 Olea europaea HOM05D007347 ORTHO05D009296 1.2e-14 85.1 63 61.9
RcHm_v2.0_Chr2g0114451 Rosa chinensis HOM05D007347 ORTHO05D009296 4.9e-13 79.7 67 50.7
RcHm_v2.0_Chr6g0269561 Rosa chinensis HOM05D007347 ORTHO05D009296 8.4e-13 79.0 64 53.1
Cc07_g04830 Coffea canephora HOM05D007347 ORTHO05D009296 1.1e-12 78.6 62 58.1
CARHR264050 Cardamine hirsuta HOM05D007347 ORTHO05D009296 1.9e-12 77.8 67 52.2
MBI03_g44528_MAGBIO Magnolia biondii HOM05D007347 ORTHO05D009296 1.9e-12 77.8 122 32.8
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 2.4e-12 77.4 62 56.5
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 3.2e-12 77.0 60 55.0
CARHR283670 Cardamine hirsuta HOM05D007347 ORTHO05D009296 9.2e-12 75.5 73 75.3
Actinidia18106 Actinidia chinensis HOM05D007347 ORTHO05D009296 1.2e-11 75.1 63 54.0
Medtr8g039270 Medicago truncatula HOM05D007347 ORTHO05D009296 2.1e-11 74.3 85 41.2
Migut.M00355 Erythranthe guttata HOM05D005973 ORTHO05D007285 2.7e-11 73.9 63 55.6
FAN26G2104 Fragaria x ananassa HOM05D007347 ORTHO05D009296 6.0e-11 72.8 61 52.5
Dinv34879 Davidia involucrata HOM05D007347 ORTHO05D009296 7.8e-11 72.4 57 57.9
Manes.02G063016 Manihot esculenta HOM05D002460 ORTHO05D002716 3.0e-10 70.5 61 52.5
Nitab4.5_0007154g0010 Nicotiana tabacum HOM05D007347 ORTHO05D009296 3.9e-10 70.1 49 61.2
Hma1.2p1_1364F.1_g278380 Hydrangea macrophylla HOM05D007347 ORTHO05D009296 5.1e-10 69.7 55 56.4
Aa31LG9G16920 Aethionema arabicum HOM05D007347 ORTHO05D009296 8.7e-10 68.9 62 51.6
FvH4_1g20970 Fragaria vesca HOM05D007347 ORTHO05D009296 1.1e-09 68.6 57 52.6
FAN19G1358 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.1e-09 68.6 57 52.6
FAN23G0923 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.1e-09 68.6 57 52.6
GSVIVG01036486001 Vitis vinifera HOM05D007347 ORTHO05D009296 1.1e-09 68.6 61 52.5
Aqoxy3G04330 Aquilegia oxysepala HOM05D007347 ORTHO05D009296 4.3e-09 66.6 61 45.9
Ah.16g102100 Amaranthus hybridus HOM05D007347 ORTHO05D009296 9.6e-09 65.5 63 47.6
Thecc.04G145700 Theobroma cacao HOM05D007347 ORTHO05D009296 1.6e-08 64.7 46 60.9
Duzib138G0808 Durio zibethinus HOM05D007347 ORTHO05D009296 2.1e-08 64.3 46 58.7
Manes.18G103700 Manihot esculenta HOM05D007347 ORTHO05D009296 2.1e-08 64.3 55 52.7
ClCG11G001180 Citrullus lanatus HOM05D007347 ORTHO05D009296 2.8e-08 63.9 62 48.4
TAR629G3514 Trochodendron aralioides HOM05D007347 ORTHO05D009296 2.8e-08 63.9 59 44.1
ATR0124G055 Amborella trichopoda HOM05D007347 ORTHO05D009296 3.6e-08 63.5 99 35.4
CiPaw.03G007800 Carya illinoinensis HOM05D007347 ORTHO05D009296 4.7e-08 63.2 57 49.1
Phvul.011G207300 Phaseolus vulgaris HOM05D007347 ORTHO05D009296 4.7e-08 63.2 67 40.3
Nn3g18549 Nelumbo nucifera HOM05D007347 ORTHO05D009296 6.2e-08 62.8 61 42.6
FAN28G0832 Fragaria x ananassa HOM05D007347 ORTHO05D009296 1.1e-07 62.0 73 56.2
MD01G1028900 Malus domestica HOM05D051265 ORTHO05D048662 1.1e-07 62.0 41 65.9
VMungo1127G1072 Vigna mungo HOM05D007347 ORTHO05D009296 1.8e-07 61.2 68 38.2
TPR.G30433 Trifolium pratense HOM05D007347 ORTHO05D009296 4.0e-07 60.1 62 45.2
TAR371G0226 Trochodendron aralioides HOM05D007347 ORTHO05D009296 4.0e-07 60.1 56 42.9
CANSAT64G0714 Cannabis sativa HOM05D007347 ORTHO05D009296 9.0e-07 58.9 46 52.2
HanXRQChr14g0448021 Helianthus annuus HOM05D007347 ORTHO05D009296 2.6e-06 57.4 45 53.3
Potri.017G108600 Populus trichocarpa HOM05D007347 ORTHO05D009296 3.4e-06 57.0 42 54.8
THA.LOC104805542 Tarenaya hassleriana HOM05D007347 ORTHO05D009296 9.9e-06 55.5 55 43.6


User provided reference genes

Program Settings