Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02343 Striga asiatica HOM05D000926 ORTHO05D000707 3.6e-41 171.4 102 100.0
MSTRG.2960 Avicennia marina HOM05D000926 ORTHO05D000707 1.9e-18 95.9 99 56.6
Migut.H00568 Erythranthe guttata HOM05D000926 ORTHO05D000707 4.0e-16 88.2 92 60.9
SalBow1G7500 Salvia bowleyana HOM05D000926 ORTHO05D000707 3.7e-14 81.6 97 48.5
MBI15_g03197_MAGBIO Magnolia biondii HOM05D000926 ORTHO05D000707 6.6e-11 70.9 88 42.0
Cfa007731 Carpinus fangiana HOM05D000926 ORTHO05D000707 2.5e-10 68.9 94 41.5
Rhsim08G0078900 Rhododendron simsii HOM05D000926 ORTHO05D000707 7.3e-10 67.4 98 44.9
Haze_14349 Corylus avellana HOM05D000926 ORTHO05D000707 2.1e-09 65.9 94 40.4
Gohir.A07G178200 Gossypium hirsutum HOM05D000926 ORTHO05D000707 4.7e-09 64.7 98 38.8
Gohir.D07G185000 Gossypium hirsutum HOM05D000926 ORTHO05D000707 4.7e-09 64.7 98 39.8
Gorai.001G205500 Gossypium raimondii HOM05D000926 ORTHO05D000707 4.7e-09 64.7 98 39.8
Thecc.04G113000 Theobroma cacao HOM05D000926 ORTHO05D000707 6.2e-09 64.3 100 43.0
Nitab4.5_0002171g0020 Nicotiana tabacum HOM05D000926 ORTHO05D000707 8.0e-09 63.9 87 40.2
Aqoxy3G00596 Aquilegia oxysepala HOM05D000926 ORTHO05D000707 1.8e-08 62.8 97 43.3
Dinv34883 Davidia involucrata HOM05D000926 ORTHO05D000707 2.3e-08 62.4 101 39.6
Nitab4.5_0005612g0030 Nicotiana tabacum HOM05D000926 ORTHO05D000707 2.3e-08 62.4 87 42.5
MD09G1078800 Malus domestica HOM05D000926 ORTHO05D000707 3.1e-08 62.0 100 45.0
TAR629G1973 Trochodendron aralioides HOM05D000926 ORTHO05D000707 3.1e-08 62.0 90 38.9
GSVIVG01036505001 Vitis vinifera HOM05D000926 ORTHO05D000707 5.2e-08 61.2 87 37.9
Eucgr.J01437 Eucalyptus grandis HOM05D000926 ORTHO05D000707 6.8e-08 60.8 91 38.5
Sc11g0008980 Simmondsia chinensis HOM05D000926 ORTHO05D000707 6.8e-08 60.8 92 40.2
Sc10g0000430 Simmondsia chinensis HOM05D000926 ORTHO05D000707 8.9e-08 60.5 103 38.8
Sopen02g034200 Solanum pennellii HOM05D000926 ORTHO05D000707 8.9e-08 60.5 89 39.3
HanXRQChr09g0263271 Helianthus annuus HOM05D000926 ORTHO05D000707 1.2e-07 60.1 91 42.9
Oeu032853.1 Olea europaea HOM05D000926 ORTHO05D000707 1.5e-07 59.7 95 42.1
Duzib138G1671 Durio zibethinus HOM05D000926 ORTHO05D000707 2.0e-07 59.3 99 38.4
FAN05G2979 Fragaria x ananassa HOM05D000926 ORTHO05D000707 2.0e-07 59.3 96 40.6
Prupe.3G245400 Prunus persica HOM05D000926 ORTHO05D000707 2.0e-07 59.3 98 44.9
CAN.G497.36 Capsicum annuum HOM05D000926 ORTHO05D000707 2.6e-07 58.9 92 41.3
CiPaw.03G080200 Carya illinoinensis HOM05D000926 ORTHO05D000707 2.6e-07 58.9 93 39.8
CAN.G93.43 Capsicum annuum HOM05D000926 ORTHO05D000707 3.4e-07 58.5 92 41.3
Solyc02g089460.1 Solanum lycopersicum HOM05D000926 ORTHO05D000707 3.4e-07 58.5 88 38.6
ClCG07G016190 Citrullus lanatus HOM05D000926 ORTHO05D000707 5.8e-07 57.8 96 42.7
Nn3g17603 Nelumbo nucifera HOM05D000926 ORTHO05D000707 5.8e-07 57.8 98 33.7
PGSC0003DMG400001477 Solanum tuberosum HOM05D000926 ORTHO05D000707 5.8e-07 57.8 84 41.7
CSS0017323 Camellia sinensis var. sinensis HOM05D000926 ORTHO05D000707 7.5e-07 57.4 86 38.4
Lj1g0009060 Lotus japonicus HOM05D000926 ORTHO05D000707 9.8e-07 57.0 98 37.8
Manes.01G105900 Manihot esculenta HOM05D000926 ORTHO05D000707 9.8e-07 57.0 90 37.8
Oeu049341.1 Olea europaea HOM05D000926 ORTHO05D000707 9.8e-07 57.0 98 41.8
Potri.017G107300 Populus trichocarpa HOM05D000926 ORTHO05D000707 9.8e-07 57.0 99 34.3
HanXRQChr14g0447991 Helianthus annuus HOM05D000926 ORTHO05D000707 1.3e-06 56.6 100 40.0
CiPaw.03G080100 Carya illinoinensis HOM05D000926 ORTHO05D000707 1.7e-06 56.2 102 39.2
Manes.02G062400 Manihot esculenta HOM05D000926 ORTHO05D000707 1.7e-06 56.2 95 35.8
RcHm_v2.0_Chr2g0164151 Rosa chinensis HOM05D000926 ORTHO05D000707 1.7e-06 56.2 101 39.6
Sabra17G0090100 Salix brachista HOM05D000926 ORTHO05D000707 1.7e-06 56.2 82 39.0
TAR374G1048 Trochodendron aralioides HOM05D000926 ORTHO05D000707 1.7e-06 56.2 98 38.8
Eucgr.J01435 Eucalyptus grandis HOM05D000926 ORTHO05D000707 2.2e-06 55.8 91 36.3
FvH4_6g45911 Fragaria vesca HOM05D000926 ORTHO05D000707 2.2e-06 55.8 90 36.7
FAN05G2016 Fragaria x ananassa HOM05D000926 ORTHO05D000707 2.2e-06 55.8 90 36.7
PGSC0003DMG400001478 Solanum tuberosum HOM05D000926 ORTHO05D000707 2.9e-06 55.5 86 37.2
Lju361C12T10 Lonicera japonica HOM05D000926 ORTHO05D000707 3.7e-06 55.1 100 39.0
Potri.017G107200 Populus trichocarpa HOM05D000926 ORTHO05D000707 3.7e-06 55.1 82 39.0
PGR042G1069 Punica granatum HOM05D000926 ORTHO05D000707 3.7e-06 55.1 78 50.0
EL10Ac2g04400 Beta vulgaris HOM05D000926 ORTHO05D000707 4.9e-06 54.7 94 37.2
CAN.G497.35 Capsicum annuum HOM05D000926 ORTHO05D000707 4.9e-06 54.7 89 36.0
Cpa.g.sc70.7 Carica papaya HOM05D000926 ORTHO05D000707 4.9e-06 54.7 100 38.0
AUR62009442 Chenopodium quinoa HOM05D000926 ORTHO05D000368 4.9e-06 54.7 90 33.3
MD09G1078900 Malus domestica HOM05D000926 ORTHO05D000707 4.9e-06 54.7 99 38.4
Oeu032854.1 Olea europaea HOM05D000926 ORTHO05D000707 4.9e-06 54.7 82 42.7
Dinv38621 Davidia involucrata HOM05D000926 ORTHO05D000707 6.4e-06 54.3 86 37.2
ECA232G0239 Erigeron canadensis HOM05D000926 ORTHO05D000707 6.4e-06 54.3 91 37.4
Lalb_Chr10g0092481 Lupinus albus HOM05D000926 ORTHO05D000707 6.4e-06 54.3 102 34.3
Eucgr.J01438 Eucalyptus grandis HOM05D000926 ORTHO05D000707 8.3e-06 53.9 88 38.6
Lsat_1_v5_gn_3_95661 Lactuca sativa HOM05D000926 ORTHO05D000707 8.3e-06 53.9 87 36.8


User provided reference genes

Program Settings