Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02333 Striga asiatica HOM05D007870 ORTHO05D010015 1.3e-27 126.3 101 100.0
unitig_8.g3804 Utricularia gibba HOM05D007870 ORTHO05D010015 4.8e-14 81.3 83 56.6
SalBow3G1909 Salvia bowleyana HOM05D007870 ORTHO05D010015 2.6e-12 75.5 83 80.7
SalBow1G0457 Salvia bowleyana HOM05D007870 ORTHO05D010015 4.5e-12 74.7 83 88.0
Nn6g33472 Nelumbo nucifera HOM05D007870 ORTHO05D010015 7.7e-12 73.9 83 80.7
Peaxi162Scf00056g00013 Petunia axillaris HOM05D007870 ORTHO05D010015 2.9e-11 72.0 83 86.7
RcHm_v2.0_Chr1g0354641 Rosa chinensis HOM05D007870 ORTHO05D010015 3.8e-11 71.6 83 68.7
DCAR_025186 Daucus carota HOM05D007870 ORTHO05D010015 8.5e-11 70.5 83 50.6
CDE09G0625 Ceratophyllum demersum HOM05D007870 ORTHO05D010015 1.1e-10 70.1 83 61.4
CDE11G0999 Ceratophyllum demersum HOM05D007870 ORTHO05D010015 1.1e-10 70.1 83 66.3
FvH4_7g13990 Fragaria vesca HOM05D007870 ORTHO05D010015 1.9e-10 69.3 83 62.7
vmacro13293 Vaccinium macrocarpon HOM05D007870 ORTHO05D010015 1.9e-10 69.3 84 73.8
vmacro23343 Vaccinium macrocarpon HOM05D007870 ORTHO05D010015 1.9e-10 69.3 84 73.8
Duzib138G1310 Durio zibethinus HOM05D007870 ORTHO05D010015 2.5e-10 68.9 83 81.9
FAN06G1295 Fragaria x ananassa HOM05D007870 ORTHO05D010015 2.5e-10 68.9 83 72.3
Thecc.01G360900 Theobroma cacao HOM05D007870 ORTHO05D010015 2.5e-10 68.9 83 69.9
FAN03G1806 Fragaria x ananassa HOM05D007870 ORTHO05D010015 5.5e-10 67.8 83 75.9
Cc02_g37830 Coffea canephora HOM05D007870 ORTHO05D010015 7.2e-10 67.4 83 69.9
Sopen01g038280 Solanum pennellii HOM05D007870 ORTHO05D010015 7.2e-10 67.4 83 48.2
PGSC0003DMG400000161 Solanum tuberosum HOM05D007870 ORTHO05D010015 7.2e-10 67.4 83 48.2
TAR375G0654 Trochodendron aralioides HOM05D007870 ORTHO05D010015 7.2e-10 67.4 83 84.3
Aqoxy7G00343 Aquilegia oxysepala HOM05D007870 ORTHO05D010015 9.4e-10 67.0 83 79.5
ATR0680G221 Amborella trichopoda HOM05D007870 ORTHO05D010015 1.6e-09 66.2 84 83.3
Lalb_Chr10g0097081 Lupinus albus HOM05D007870 ORTHO05D010015 1.6e-09 66.2 83 67.5
Dinv43804 Davidia involucrata HOM05D007870 ORTHO05D010015 2.1e-09 65.9 83 65.1
FAN01G0023 Fragaria x ananassa HOM05D007870 ORTHO05D010015 2.1e-09 65.9 83 77.1
FAN06G2504 Fragaria x ananassa HOM05D007870 ORTHO05D010015 2.1e-09 65.9 83 77.1
BcaC02g07064 Brassica carinata HOM05D007870 ORTHO05D010015 2.7e-09 65.5 83 65.1
C04p71900 Brassica napus HOM05D007870 ORTHO05D010015 2.7e-09 65.5 83 65.1
BolC4t28688H Brassica oleracea HOM05D007870 ORTHO05D010015 2.7e-09 65.5 83 48.2
Lalb_Chr04g0256851 Lupinus albus HOM05D007870 ORTHO05D010015 3.6e-09 65.1 83 79.5
Medtr8g031040 Medicago truncatula HOM05D007870 ORTHO05D010015 3.6e-09 65.1 83 79.5
TWI23G0891 Tripterygium wilfordii HOM05D007870 ORTHO05D010015 3.6e-09 65.1 83 69.9
BraA04t18871Z Brassica rapa HOM05D007870 ORTHO05D010015 6.1e-09 64.3 83 62.7
Thhalv10001707m.g Eutrema salsugineum HOM05D007870 ORTHO05D010015 6.1e-09 64.3 83 48.2
Psat4g155360 Pisum sativum HOM05D007870 ORTHO05D010015 6.1e-09 64.3 83 69.9
Actinidia10023 Actinidia chinensis HOM05D007870 ORTHO05D010015 1.0e-08 63.5 79 83.5
AL4G45070 Arabidopsis lyrata HOM05D007870 ORTHO05D010015 1.0e-08 63.5 83 63.9
BcaC02g12172 Brassica carinata HOM05D007870 ORTHO05D010015 1.0e-08 63.5 83 79.5
C04p06780 Brassica napus HOM05D007870 ORTHO05D010015 1.0e-08 63.5 83 71.1
Sp4g27930 Schrenkiella parvula HOM05D007870 ORTHO05D010015 1.0e-08 63.5 83 65.1
BcaB02g09002 Brassica carinata HOM05D007870 ORTHO05D010015 1.8e-08 62.8 83 47.0
A04p34100 Brassica napus HOM05D007870 ORTHO05D010015 1.8e-08 62.8 83 63.9
MD01G1056300 Malus domestica HOM05D007870 ORTHO05D010015 1.8e-08 62.8 83 73.5
Oeu056365.2 Olea europaea HOM05D007870 ORTHO05D010015 1.8e-08 62.8 111 40.5
A05p05830 Brassica napus HOM05D007870 ORTHO05D010015 2.3e-08 62.4 83 62.7
Carub.0004s2856 Capsella rubella HOM05D007870 ORTHO05D010015 2.3e-08 62.4 83 47.0
Gorai.004G158100 Gossypium raimondii HOM05D007870 ORTHO05D010015 2.3e-08 62.4 83 81.9
MBI18_g40941_MAGBIO Magnolia biondii HOM05D007870 ORTHO05D010015 4.0e-08 61.6 83 83.1
arahy.Tifrunner.gnm1.ann1.52J70V Arachis hypogaea HOM05D007870 ORTHO05D010015 5.2e-08 61.2 83 45.8
arahy.Tifrunner.gnm1.ann1.LLY2P5 Arachis hypogaea HOM05D007870 ORTHO05D010015 5.2e-08 61.2 83 45.8
Manes.05G036400 Manihot esculenta HOM05D007870 ORTHO05D010015 5.2e-08 61.2 83 77.1
Potri.014G082300 Populus trichocarpa HOM05D007870 ORTHO05D010015 5.2e-08 61.2 83 80.7
TPR.G39935 Trifolium pratense HOM05D007870 ORTHO05D010015 5.2e-08 61.2 83 81.9
BolC4t22300H Brassica oleracea HOM05D007870 ORTHO05D010015 6.7e-08 60.8 83 50.6
Lj3g0023390 Lotus japonicus HOM05D007870 ORTHO05D010015 6.7e-08 60.8 81 72.8
Os02g0824400 Oryza sativa ssp. japonica HOM05D007870 ORTHO05D010015 8.8e-08 60.5 83 45.8
BraA05t19548Z Brassica rapa HOM05D007870 ORTHO05D010015 1.5e-07 59.7 83 63.9
Zm00001eb190830 Zea mays HOM05D007870 ORTHO05D010015 1.5e-07 59.7 83 59.0
CAN.G78.34 Capsicum annuum HOM05D007870 ORTHO05D010015 2.0e-07 59.3 83 83.1
MELO3C006117.2 Cucumis melo HOM05D007870 ORTHO05D010015 3.3e-07 58.5 83 51.8
QL08p049047 Quercus lobata HOM05D007870 ORTHO05D010015 3.3e-07 58.5 82 45.1
Aa31LG10G15580 Aethionema arabicum HOM05D007870 ORTHO05D010015 4.4e-07 58.2 85 45.9
Phvul.010G097100 Phaseolus vulgaris HOM05D007870 ORTHO05D010015 7.5e-07 57.4 83 43.4
MBI18_g19072_MAGBIO Magnolia biondii HOM05D007870 ORTHO05D010015 1.3e-06 56.6 83 81.9
PGR031G0106 Punica granatum HOM05D007870 ORTHO05D010015 1.3e-06 56.6 83 77.1
Lsat_1_v5_gn_3_137021 Lactuca sativa HOM05D007870 ORTHO05D010015 6.3e-06 54.3 79 74.7
HPP92_014735 Vanilla planifolia HOM05D007870 ORTHO05D010015 8.2e-06 53.9 81 43.2


User provided reference genes

Program Settings