Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02301 Striga asiatica HOM05D000115 ORTHO05D403219 2.1e-123 445.7 214 100.0
SGA_v2.0_scaffold78G25401 Striga asiatica HOM05D000115 ORTHO05D401109 1.1e-20 104.4 184 39.1
Gohir.D11G309000 Gossypium hirsutum HOM05D000115 ORTHO05D000464 2.6e-09 66.6 111 36.0
CSS0005998 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D000464 9.9e-09 64.7 157 30.6
MSTRG.20406 Avicennia marina HOM05D000115 ORTHO05D000464 1.3e-08 64.3 157 29.9
ClCG02G015410 Citrullus lanatus HOM05D000115 ORTHO05D000464 2.2e-08 63.5 157 29.9
MELO3C004221.2 Cucumis melo HOM05D000115 ORTHO05D000464 2.2e-08 63.5 157 29.9
CsaV3_2G006670 Cucumis sativus L. HOM05D000115 ORTHO05D000464 2.2e-08 63.5 157 29.9
Dinv40352 Davidia involucrata HOM05D000115 ORTHO05D000464 2.2e-08 63.5 157 30.6
Cfa006641 Carpinus fangiana HOM05D000115 ORTHO05D000464 3.8e-08 62.8 154 29.9
Haze_04125 Corylus avellana HOM05D000115 ORTHO05D000464 3.8e-08 62.8 154 29.9
RcHm_v2.0_Chr3g0456301 Rosa chinensis HOM05D000115 ORTHO05D000464 3.8e-08 62.8 157 29.3
Migut.N02093 Erythranthe guttata HOM05D000115 ORTHO05D000464 4.9e-08 62.4 157 29.3
MSTRG.5115 Avicennia marina HOM05D000115 ORTHO05D000464 6.4e-08 62.0 157 28.0
FAN02G2798 Fragaria x ananassa HOM05D000115 ORTHO05D000464 6.4e-08 62.0 159 28.9
TWI56G0644 Tripterygium wilfordii HOM05D000115 ORTHO05D000464 8.4e-08 61.6 157 28.0
FvH4_6g06810 Fragaria vesca HOM05D000115 ORTHO05D000464 1.1e-07 61.2 157 28.7
FAN09G2818 Fragaria x ananassa HOM05D000115 ORTHO05D000464 1.1e-07 61.2 157 28.7
FAN14G2390 Fragaria x ananassa HOM05D000115 ORTHO05D000464 1.1e-07 61.2 157 28.7
Prupe.6G318800 Prunus persica HOM05D000115 ORTHO05D000464 1.4e-07 60.8 154 29.9
MSTRG.27975 Avicennia marina HOM05D000115 ORTHO05D000464 1.9e-07 60.5 157 28.0
BcaNung04747 Brassica carinata HOM05D000115 ORTHO05D000464 1.9e-07 60.5 136 31.6
Cc02_g34320 Coffea canephora HOM05D000115 ORTHO05D000464 1.9e-07 60.5 157 28.7
TAR365G0125 Trochodendron aralioides HOM05D000115 ORTHO05D000464 1.9e-07 60.5 157 28.7
BcaC05g30107 Brassica carinata HOM05D000115 ORTHO05D000464 2.4e-07 60.1 146 29.5
Sed0027230 Sechium edule HOM05D000115 ORTHO05D000464 2.4e-07 60.1 171 28.1
Sc16g0008770 Simmondsia chinensis HOM05D000115 ORTHO05D000464 2.4e-07 60.1 157 28.0
Gohir.A08G208400 Gossypium hirsutum HOM05D000115 ORTHO05D000464 3.2e-07 59.7 157 27.4
Gohir.D08G225200 Gossypium hirsutum HOM05D000115 ORTHO05D000464 3.2e-07 59.7 157 27.4
Gorai.004G239200 Gossypium raimondii HOM05D000115 ORTHO05D000464 3.2e-07 59.7 157 27.4
Dinv30827 Davidia involucrata HOM05D000115 ORTHO05D000464 4.2e-07 59.3 157 28.0
Lsat_1_v5_gn_5_147300 Lactuca sativa HOM05D000115 ORTHO05D000464 4.2e-07 59.3 157 28.0
HanXRQChr10g0299351 Helianthus annuus HOM05D000115 ORTHO05D000464 5.4e-07 58.9 157 28.7
MD04G1198300 Malus domestica HOM05D000115 ORTHO05D000464 5.4e-07 58.9 153 28.8
THA.LOC104802792 Tarenaya hassleriana HOM05D000115 ORTHO05D000464 5.4e-07 58.9 157 28.0
TAR636G1694 Trochodendron aralioides HOM05D000115 ORTHO05D002564 5.4e-07 58.9 157 27.4
Cpa.g.sc48.102 Carica papaya HOM05D000115 ORTHO05D000464 7.1e-07 58.5 157 27.4
MD12G1210900 Malus domestica HOM05D000115 ORTHO05D000464 7.1e-07 58.5 153 28.1
Thhalv10021158m.g Eutrema salsugineum HOM05D000115 ORTHO05D000464 9.3e-07 58.2 153 28.1
SGA_v2.0_scaffold172G38994 Striga asiatica HOM05D000115 ORTHO05D000464 9.3e-07 58.2 153 29.4
Thecc.05G314500 Theobroma cacao HOM05D000115 ORTHO05D000464 9.3e-07 58.2 157 26.8
CiPaw.07G006300 Carya illinoinensis HOM05D000115 ORTHO05D000464 1.2e-06 57.8 128 32.8
COL.COLO4_10537 Corchorus olitorius HOM05D000115 ORTHO05D000464 1.2e-06 57.8 157 27.4
DCAR_029385 Daucus carota HOM05D000115 ORTHO05D000464 1.2e-06 57.8 157 26.8
HanXRQChr16g0513501 Helianthus annuus HOM05D000115 ORTHO05D000464 1.2e-06 57.8 157 27.4
Rhsim05G0137700 Rhododendron simsii HOM05D000115 ORTHO05D000464 1.2e-06 57.8 180 27.2
Hund07107 Selenicereus undatus HOM05D000115 ORTHO05D000464 1.2e-06 57.8 157 28.0
EL10Ac4g09900 Beta vulgaris HOM05D000115 ORTHO05D000464 1.6e-06 57.4 157 27.4
BcaB04g21438 Brassica carinata HOM05D000115 ORTHO05D000464 1.6e-06 57.4 157 28.0
A03p34210 Brassica napus HOM05D000115 ORTHO05D000464 1.6e-06 57.4 157 28.0
BraA01t04481Z Brassica rapa HOM05D000115 ORTHO05D000464 1.6e-06 57.4 157 28.0
BraA03t12595Z Brassica rapa HOM05D000115 ORTHO05D000464 1.6e-06 57.4 157 28.0
Eucgr.H04547 Eucalyptus grandis HOM05D000115 ORTHO05D000464 1.6e-06 57.4 153 28.1
Nn3g21518 Nelumbo nucifera HOM05D000115 ORTHO05D000464 1.6e-06 57.4 157 28.0
Sp2g20960 Schrenkiella parvula HOM05D000115 ORTHO05D000464 1.6e-06 57.4 157 28.0
Actinidia21501 Actinidia chinensis HOM05D000115 ORTHO05D000464 2.1e-06 57.0 153 28.1
Aa31LG11G9590 Aethionema arabicum HOM05D000115 ORTHO05D000464 2.1e-06 57.0 157 28.0
CARHR080010 Cardamine hirsuta HOM05D000115 ORTHO05D000464 2.1e-06 57.0 157 28.0
CiPaw.07G022800 Carya illinoinensis HOM05D000115 ORTHO05D000464 2.1e-06 57.0 153 27.5
Sp3g04450 Schrenkiella parvula HOM05D000115 ORTHO05D000464 2.1e-06 57.0 157 28.0
THA.LOC104818727 Tarenaya hassleriana HOM05D000115 ORTHO05D000464 2.1e-06 57.0 153 28.1
C03p41600 Brassica napus HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 28.0
BolC3t16441H Brassica oleracea HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 28.0
CSS0048412 Camellia sinensis var. sinensis HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 28.0
Duzib106G1973 Durio zibethinus HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 27.4
Migut.B01015 Erythranthe guttata HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 27.4
Medtr7g112870 Medicago truncatula HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 26.8
Nn4g25780 Nelumbo nucifera HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 27.4
Potri.013G014700 Populus trichocarpa HOM05D000115 ORTHO05D000464 2.7e-06 56.6 157 28.0
AL3G16210 Arabidopsis lyrata HOM05D000115 ORTHO05D000464 3.5e-06 56.2 157 28.0
BcaC09g47831 Brassica carinata HOM05D000115 ORTHO05D000464 3.5e-06 56.2 157 28.0
BolC1t05685H Brassica oleracea HOM05D000115 ORTHO05D000464 3.5e-06 56.2 157 28.0
ECA234G1191 Erigeron canadensis HOM05D000115 ORTHO05D000464 3.5e-06 56.2 157 27.4
SalBow7G0476 Salvia bowleyana HOM05D000115 ORTHO05D000464 3.5e-06 56.2 157 26.8
SGA_v2.0_scaffold54G19471 Striga asiatica HOM05D000115 ORTHO05D000464 3.5e-06 56.2 129 31.8
AT3G05580 Arabidopsis thaliana HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 28.0
BcaB04g19689 Brassica carinata HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
BcaC03g17809 Brassica carinata HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
A02p38780 Brassica napus HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
C02p58330 Brassica napus HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
C05p61630 Brassica napus HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
BolC2t11897H Brassica oleracea HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
BolC5t34821H Brassica oleracea HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
BraA05t22957Z Brassica rapa HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 27.4
Carub.0003s0489 Capsella rubella HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 28.0
Glyma.03G234700 Glycine max HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 28.0
Lj5C370G3 Lonicera japonica HOM05D000115 ORTHO05D000464 4.6e-06 55.8 153 27.5
Nitab4.5_0003113g0090 Nicotiana tabacum HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 28.0
Nitab4.5_0007800g0040 Nicotiana tabacum HOM05D000115 ORTHO05D000464 4.6e-06 55.8 157 28.0
Oeu017268.1 Olea europaea HOM05D000115 ORTHO05D000464 4.6e-06 55.8 153 28.1
Phvul.006G088900 Phaseolus vulgaris HOM05D000115 ORTHO05D000464 4.6e-06 55.8 153 28.8
Sabra13G0012600 Salix brachista HOM05D000115 ORTHO05D000464 4.6e-06 55.8 154 27.9
AL6G39100 Arabidopsis lyrata HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
A06p37300 Brassica napus HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
C07p41160 Brassica napus HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
BolC7t44644H Brassica oleracea HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
BraA06t26653Z Brassica rapa HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
Duzib177G0540 Durio zibethinus HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 26.8
Eucgr.B01909 Eucalyptus grandis HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
Thhalv10004612m.g Eutrema salsugineum HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
Sc06g0003900 Simmondsia chinensis HOM05D000115 ORTHO05D000464 6.0e-06 55.5 157 27.4
Sabra05G0029500 Salix brachista HOM05D000115 ORTHO05D000464 7.8e-06 55.1 157 27.4
vmacro19697 Vaccinium macrocarpon HOM05D000115 ORTHO05D000464 7.8e-06 55.1 157 27.4


User provided reference genes

Program Settings