Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02282 Striga asiatica HOM05D018457 ORTHO05D000045 2.8e-61 238.4 120 100.0
SGA_v2.0_scaffold24G10705 Striga asiatica HOM05D018457 ORTHO05D000045 1.7e-45 186.0 173 63.6
SGA_v2.0_scaffold32G13337 Striga asiatica HOM05D018457 ORTHO05D000045 2.5e-41 172.2 166 62.0
SGA_v2.0_scaffold160G37714 Striga asiatica HOM05D018457 ORTHO05D000045 2.2e-29 132.5 80 78.8
SGA_v2.0_scaffold33G13378 Striga asiatica HOM05D000096 ORTHO05D000045 4.7e-24 114.8 83 61.4
Cc02_g03810 Coffea canephora HOM05D000096 ORTHO05D000045 9.7e-22 107.1 86 58.1
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 9.7e-22 107.1 81 53.1
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-21 106.7 87 51.7
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.3e-21 104.4 91 52.7
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.3e-21 104.4 91 52.7
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.3e-21 104.4 91 52.7
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.3e-21 104.4 91 52.7
Cc00_g07260 Coffea canephora HOM05D000096 ORTHO05D000045 7.0e-20 100.9 87 55.2
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 5.9e-19 97.8 87 51.7
Cc03_g09110 Coffea canephora HOM05D000096 ORTHO05D000045 8.0e-16 87.4 88 45.5
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 9.8e-14 80.5 88 42.0
Oeu024349.1 Olea europaea HOM05D000096 ORTHO05D000045 9.8e-14 80.5 85 41.2
Cc01_g04040 Coffea canephora HOM05D000096 ORTHO05D000045 1.7e-13 79.7 88 37.5
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.8e-13 79.0 87 39.1
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.8e-13 79.0 87 39.1
Oeu005211.1 Olea europaea HOM05D000423 ORTHO05D000284 2.8e-13 79.0 80 42.5
CAN.G97.48 Capsicum annuum HOM05D000096 ORTHO05D000045 4.8e-13 78.2 86 41.9
Oeu014098.1 Olea europaea HOM05D000096 ORTHO05D000045 4.8e-13 78.2 85 41.2
Atru.chr4.2124 Acer truncatum HOM05D000096 ORTHO05D000045 6.3e-13 77.8 87 37.9
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 6.3e-13 77.8 86 41.9
Oeu039129.1 Olea europaea HOM05D000096 ORTHO05D000045 8.3e-13 77.4 85 40.0
Atru.chr12.1652 Acer truncatum HOM05D000096 ORTHO05D000045 1.1e-12 77.0 83 37.3
CAN.G273.19 Capsicum annuum HOM05D000096 ORTHO05D000045 1.8e-12 76.3 87 41.4
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-12 76.3 86 39.5
CiPaw.06G111300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-12 76.3 86 39.5
CiPaw.15G028600 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.8e-12 76.3 86 39.5
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.8e-12 76.3 86 38.4
Atru.chr3.2970 Acer truncatum HOM05D000096 ORTHO05D000045 2.4e-12 75.9 83 36.1
CiPaw.01G147400 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-12 75.9 83 39.8
Oeu037905.1 Olea europaea HOM05D000096 ORTHO05D000045 2.4e-12 75.9 87 40.2
Oeu062429.1 Olea europaea HOM05D000096 ORTHO05D000045 2.4e-12 75.9 85 37.6
CiPaw.09G168700 Carya illinoinensis HOM05D000096 ORTHO05D000045 3.1e-12 75.5 86 40.7
CANSAT64G1628 Cannabis sativa HOM05D000096 ORTHO05D000045 4.1e-12 75.1 92 43.5
CiPaw.01G296900 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.1e-12 75.1 87 37.9
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.1e-12 75.1 87 36.8
CiPaw.09G160200 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.1e-12 75.1 87 37.9
CiPaw.10G120300 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.1e-12 75.1 87 37.9
CiPaw.13G069100 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.1e-12 75.1 87 37.9
Oeu014096.1 Olea europaea HOM05D000096 ORTHO05D000045 4.1e-12 75.1 85 40.0
CANSAT56G4396 Cannabis sativa HOM05D000096 ORTHO05D000045 5.4e-12 74.7 98 36.7
CANSAT78G0229 Cannabis sativa HOM05D000096 ORTHO05D000045 5.4e-12 74.7 98 37.8
Oeu049717.1 Olea europaea HOM05D000096 ORTHO05D000045 5.4e-12 74.7 87 37.9
CANSAT64G1799 Cannabis sativa HOM05D000096 ORTHO05D000045 9.1e-12 73.9 92 42.4
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 9.1e-12 73.9 90 36.7
Oeu005870.1 Olea europaea HOM05D000096 ORTHO05D000045 9.1e-12 73.9 85 38.8
Oeu007778.1 Olea europaea HOM05D000096 ORTHO05D000045 9.1e-12 73.9 87 37.9
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-11 73.6 86 39.5
Oeu049649.1 Olea europaea HOM05D000096 ORTHO05D000045 1.2e-11 73.6 83 39.8
Oeu029244.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-11 72.8 87 36.8
Oeu031952.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-11 72.8 87 36.8
Oeu038389.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-11 72.8 87 37.9
EL10Ac6g15055 Beta vulgaris HOM05D000096 ORTHO05D000045 2.7e-11 72.4 83 42.2
CANSAT80G1195 Cannabis sativa HOM05D000096 ORTHO05D000045 2.7e-11 72.4 98 35.7
Oeu017669.1 Olea europaea HOM05D000096 ORTHO05D000045 2.7e-11 72.4 87 37.9
Oeu027785.3 Olea europaea HOM05D000096 ORTHO05D000045 2.7e-11 72.4 87 37.9
Oeu053705.1 Olea europaea HOM05D001043 ORTHO05D001555 2.7e-11 72.4 83 36.1
Atru.chr2.1644 Acer truncatum HOM05D000096 ORTHO05D000045 3.5e-11 72.0 83 39.8
Oeu032904.1 Olea europaea HOM05D000096 ORTHO05D000045 3.5e-11 72.0 87 36.8
Oeu032961.1 Olea europaea HOM05D000096 ORTHO05D000045 3.5e-11 72.0 87 37.9
Oeu017741.1 Olea europaea HOM05D000096 ORTHO05D000045 4.5e-11 71.6 87 39.1
CiPaw.01G182600 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.9e-11 71.2 83 38.6
Oeu057797.1 Olea europaea HOM05D000096 ORTHO05D000045 5.9e-11 71.2 85 38.8
EL10Ac8g20308 Beta vulgaris HOM05D000096 ORTHO05D000045 7.7e-11 70.9 83 41.0
Oeu054130.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-10 70.1 85 35.3
Oeu063187.1 Olea europaea HOM05D000096 ORTHO05D000045 1.3e-10 70.1 80 41.2
EL10Ac8g19546 Beta vulgaris HOM05D000096 ORTHO05D000045 1.7e-10 69.7 83 41.0
Oeu031271.1 Olea europaea HOM05D000096 ORTHO05D000045 1.7e-10 69.7 87 35.6
Oeu051178.1 Olea europaea HOM05D000096 ORTHO05D000045 2.9e-10 68.9 87 35.6
CiPaw.15G180000 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.0e-10 68.2 86 37.2
Nn4g25156 Nelumbo nucifera HOM05D000096 ORTHO05D000045 6.6e-10 67.8 87 34.5
Oeu007468.1 Olea europaea HOM05D000096 ORTHO05D000045 6.6e-10 67.8 87 32.2
Oeu061729.1 Olea europaea HOM05D000096 ORTHO05D000045 8.6e-10 67.4 91 34.1
SGA_v2.0_scaffold1G00565 Striga asiatica HOM05D018457 ORTHO05D000045 8.6e-10 67.4 45 66.7
CiPaw.10G120400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-09 67.0 86 37.2
EL10Ac7g17652 Beta vulgaris HOM05D000096 ORTHO05D000045 1.5e-09 66.6 87 32.2
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 1.9e-09 66.2 91 38.5
CAN.G297.5 Capsicum annuum HOM05D000096 ORTHO05D000045 1.9e-09 66.2 93 37.6
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 2.5e-09 65.9 83 37.3
Oeu024546.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-09 65.9 65 46.2
Oeu043599.1 Olea europaea HOM05D000096 ORTHO05D000045 2.5e-09 65.9 83 36.1
EL10Ac5g10500 Beta vulgaris HOM05D000096 ORTHO05D000045 3.3e-09 65.5 89 34.8
CAN.G93.7 Capsicum annuum HOM05D000096 ORTHO05D000045 3.3e-09 65.5 83 36.1
Oeu007626.1 Olea europaea HOM05D000096 ORTHO05D000045 3.3e-09 65.5 76 39.5
Oeu054515.1 Olea europaea HOM05D000096 ORTHO05D000045 3.3e-09 65.5 88 35.2
CiPaw.01G058000 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.2e-09 65.1 86 37.2
SGA_v2.0_scaffold75G24967 Striga asiatica HOM05D018457 ORTHO05D000045 4.2e-09 65.1 41 75.6
EL10Ac4g09359 Beta vulgaris HOM05D000096 ORTHO05D000045 5.5e-09 64.7 89 34.8
CiPaw.11G156500 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.5e-09 64.7 90 34.4
Oeu050616.1 Olea europaea HOM05D000096 ORTHO05D000045 5.5e-09 64.7 65 43.1
EL10Ac5g11733 Beta vulgaris HOM05D000096 ORTHO05D000045 7.2e-09 64.3 89 34.8
EL10Ac5g11745 Beta vulgaris HOM05D000096 ORTHO05D000045 7.2e-09 64.3 74 41.9
EL10Ac5g12706 Beta vulgaris HOM05D000096 ORTHO05D000045 7.2e-09 64.3 89 34.8
PGSC0003DMG400042276 Solanum tuberosum HOM05D000096 ORTHO05D000045 7.2e-09 64.3 92 33.7
EL10Ac4g07894 Beta vulgaris HOM05D000096 ORTHO05D000045 9.5e-09 63.9 89 33.7
CANSAT25G0821 Cannabis sativa HOM05D000096 ORTHO05D000045 1.2e-08 63.5 88 37.5
EL10Ac1g01711 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-08 62.8 89 33.7
EL10Ac1g02310 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-08 62.8 70 41.4
EL10Ac6g13732 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-08 62.8 83 36.1
EL10Ac8g19574 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-08 62.8 83 36.1
EL10Ac8g20587 Beta vulgaris HOM05D000096 ORTHO05D000045 2.1e-08 62.8 83 36.1
Oeu003460.1 Olea europaea HOM05D000096 ORTHO05D000045 2.1e-08 62.8 80 36.2
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 2.1e-08 62.8 89 36.0
EL10Ac7g16756 Beta vulgaris HOM05D000096 ORTHO05D000045 2.8e-08 62.4 89 34.8
Oeu046629.1 Olea europaea HOM05D000096 ORTHO05D000045 2.8e-08 62.4 65 43.1
SGA_v2.0_scaffold4G02506 Striga asiatica HOM05D000096 ORTHO05D000045 2.8e-08 62.4 86 41.9
ECA233G5367 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-08 62.0 87 33.3
EL10Ac1g01110 Beta vulgaris HOM05D000096 ORTHO05D000045 4.7e-08 61.6 83 36.1
ECA246G2596 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.7e-08 61.6 87 32.2
Zm00001eb381320 Zea mays HOM05D008064 ORTHO05D000045 8.0e-08 60.8 106 31.1
CAN.G741.30 Capsicum annuum HOM05D000096 ORTHO05D000045 1.4e-07 60.1 83 34.9
ECA240G0844 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.4e-07 60.1 87 32.2
Oeu040938.1 Olea europaea HOM05D000096 ORTHO05D000045 1.4e-07 60.1 72 37.5
Zm00001eb009210 Zea mays HOM05D008270 ORTHO05D000045 3.0e-07 58.9 106 29.2
Zm00001eb185320 Zea mays HOM05D008270 ORTHO05D010684 6.8e-07 57.8 106 29.2
SGA_v2.0_scaffold30G12441 Striga asiatica HOM05D000096 ORTHO05D000045 8.9e-07 57.4 41 68.3
EL10Ac5g11439 Beta vulgaris HOM05D000096 ORTHO05D000045 1.2e-06 57.0 70 38.6
SGA_v2.0_scaffold142G35702 Striga asiatica HOM05D000096 ORTHO05D000045 1.2e-06 57.0 90 33.3
CANSAT64G0254 Cannabis sativa HOM05D000096 ORTHO05D000045 1.5e-06 56.6 66 34.8
CiPaw.09G061200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-06 56.6 66 39.4
CiPaw.10G073400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-06 56.6 66 39.4
AUR62027939 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.5e-06 56.6 83 32.5
Zm00001eb246380 Zea mays HOM05D043488 ORTHO05D441847 1.5e-06 56.6 73 43.8
Oeu025879.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-06 56.2 72 36.1
Oeu029175.1 Olea europaea HOM05D000096 ORTHO05D000045 2.0e-06 56.2 69 36.2
EL10Ac2g03134 Beta vulgaris HOM05D000096 ORTHO05D000045 2.6e-06 55.8 70 34.3
CANSAT01G2209 Cannabis sativa HOM05D000096 ORTHO05D000045 7.5e-06 54.3 66 33.3
Rhsim01G0079700 Rhododendron simsii HOM05D000096 ORTHO05D000045 7.5e-06 54.3 55 43.6


User provided reference genes

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