Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 9.8e-121 436.8 219 100.0
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 4.0e-106 388.3 232 87.1
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 5.2e-106 387.9 232 86.6
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 1.7e-104 382.9 232 85.8
SGA_v2.0_scaffold46G17409 Striga asiatica HOM05D021043 ORTHO05D399715 6.3e-59 231.5 165 77.0
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 3.5e-33 146.0 227 40.5
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-22 110.9 116 48.3
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-22 109.4 82 59.8
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-20 101.7 183 33.3
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 1.3e-19 100.9 185 37.3
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-19 99.4 118 41.5
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-18 95.1 156 37.2
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 1.1e-15 87.8 209 28.7
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-15 86.7 156 34.6
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 5.7e-12 75.5 251 26.7
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 3.7e-11 72.8 142 26.8
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-10 69.7 137 31.4
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-09 67.8 277 22.7
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 1.6e-09 67.4 56 42.9
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-09 67.0 79 41.8
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 2.0e-09 67.0 102 37.3
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-09 66.6 100 36.0
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-09 66.6 100 36.0
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 4.5e-09 65.9 219 23.3
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 5.0e-08 62.4 119 24.4
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.9e-07 60.5 85 34.1
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-06 57.8 88 33.0


User provided reference genes

Program Settings