Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 3.5e-310 1067.4 521 100.0
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 2.3e-237 825.5 521 77.9
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 2.2e-235 818.9 532 75.4
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 1.4e-226 789.6 531 74.2
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 2.4e-226 788.9 487 77.6
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 1.3e-224 783.1 513 74.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 3.9e-224 781.6 455 79.8
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 4.3e-223 778.1 519 72.8
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 9.5e-223 776.9 491 76.2
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 1.2e-222 776.5 521 71.8
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.8e-221 772.7 500 72.8
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 3.1e-221 771.9 521 71.4
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 1.2e-220 770.0 523 71.3
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 2.0e-220 769.2 519 72.1
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.4e-220 768.1 460 77.8
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 4.4e-220 768.1 520 71.3
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 7.5e-220 767.3 520 72.5
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 7.5e-220 767.3 457 78.8
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 1.3e-219 766.5 472 76.7
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 2.2e-219 765.8 522 71.3
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.1e-218 763.5 515 73.4
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 1.1e-218 763.5 471 75.2
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 1.4e-218 763.1 465 77.4
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 1.9e-218 762.7 524 70.8
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 1.9e-218 762.7 521 71.0
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 4.1e-218 761.5 455 77.6
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 4.1e-218 761.5 466 76.0
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.4e-218 761.1 477 74.6
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 9.2e-218 760.4 488 74.8
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 9.2e-218 760.4 508 72.4
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 2.1e-217 759.2 504 71.4
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 4.6e-217 758.1 466 75.1
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 6.0e-217 757.7 521 69.9
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 7.8e-217 757.3 465 75.9
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 1.0e-216 756.9 455 77.6
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.0e-216 756.9 521 71.6
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.3e-216 756.5 466 75.5
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 2.3e-216 755.7 503 71.6
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 2.3e-216 755.7 466 74.5
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 3.9e-216 755.0 524 71.8
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 1.5e-215 753.1 521 70.6
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 1.9e-215 752.7 454 78.0
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 2.5e-215 752.3 506 71.7
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 2.5e-215 752.3 524 71.4
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 3.3e-215 751.9 496 73.4
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 5.6e-215 751.1 497 71.8
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 7.3e-215 750.7 452 77.7
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 1.6e-214 749.6 489 73.0
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 2.8e-214 748.8 493 72.4
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 2.8e-214 748.8 532 70.1
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 6.2e-214 747.7 478 73.6
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 8.1e-214 747.3 453 77.9
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.1e-213 746.9 484 73.1
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 2.3e-213 745.7 499 72.1
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 3.1e-213 745.3 513 71.2
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 3.1e-213 745.3 457 75.9
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 4.0e-213 745.0 521 70.2
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 8.9e-213 743.8 475 73.5
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 8.9e-213 743.8 532 69.4
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 1.2e-212 743.4 481 74.8
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 2.0e-212 742.7 455 76.0
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 2.6e-212 742.3 512 70.3
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 2.6e-212 742.3 517 69.2
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 4.4e-212 741.5 512 70.1
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 5.8e-212 741.1 512 70.5
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 7.5e-212 740.7 533 67.2
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 2.2e-211 739.2 512 70.3
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 2.9e-211 738.8 512 70.1
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 2.9e-211 738.8 499 70.9
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 3.7e-211 738.4 490 71.8
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 6.0e-209 731.1 490 70.4
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 3.0e-208 728.8 465 74.6
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 3.0e-208 728.8 505 69.7
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 3.9e-208 728.4 465 74.6
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 3.3e-207 725.3 548 65.9
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 4.3e-207 724.9 471 71.3
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 7.3e-207 724.2 443 75.8
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 2.8e-206 722.2 465 71.6
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 8.1e-206 720.7 450 73.3
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 3.1e-205 718.8 491 72.7
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 4.0e-205 718.4 484 69.2
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.2e-205 718.0 465 72.7
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 8.9e-205 717.2 524 67.4
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.2e-204 716.8 454 74.7
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 9.9e-204 713.8 453 74.2
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 5.4e-202 708.0 456 72.6
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 3.5e-201 705.3 454 71.8
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 4.6e-201 704.9 473 72.5
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 7.3e-199 697.6 464 69.4
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 3.8e-195 685.3 496 66.1
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 6.0e-193 677.9 483 65.0
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 3.0e-192 675.6 521 66.8
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.4e-189 666.8 456 70.2
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 8.4e-187 657.5 465 67.3
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 7.9e-185 651.0 447 67.6
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 6.7e-184 647.9 451 66.3
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 3.7e-182 642.1 521 63.7
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 1.1e-173 614.0 463 65.4
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 3.1e-173 612.5 521 58.7
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 4.0e-173 612.1 488 60.5
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.2e-169 600.5 366 77.0
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 7.7e-164 581.3 383 72.3
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.0e-163 580.9 413 68.8
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 4.0e-136 489.2 485 55.3
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 1.7e-134 483.8 330 71.2
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 3.6e-129 466.1 461 50.1
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 1.2e-119 434.5 476 48.3
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 3.4e-119 433.0 323 68.1
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 8.3e-110 401.7 300 65.7
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 8.6e-107 391.7 505 43.8
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.3e-81 308.1 449 39.2
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 2.1e-44 184.5 226 43.4
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 2.2e-41 174.5 100 77.0
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 3.0e-35 154.1 95 75.8
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 3.0e-35 154.1 95 75.8
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 3.0e-35 154.1 95 75.8
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 3.0e-35 154.1 95 75.8
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 9.1e-32 142.5 280 35.4
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 9.7e-26 122.5 78 70.5
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 1.8e-19 101.7 63 74.6
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 2.3e-11 74.7 43 83.7
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 6.3e-09 66.6 40 72.5
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 7.0e-08 63.2 121 39.7


User provided reference genes

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