Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02273 Striga asiatica HOM05D002932 ORTHO05D003208 9.8e-121 436.8 218 100.0
MSTRG.17303 Avicennia marina HOM05D002932 ORTHO05D003208 5.9e-33 145.2 245 45.7
MSTRG.20870 Avicennia marina HOM05D002932 ORTHO05D003208 1.8e-29 133.7 242 43.0
MSTRG.4831 Avicennia marina HOM05D002932 ORTHO05D003208 5.3e-26 122.1 252 39.7
SalBow3G2518 Salvia bowleyana HOM05D002932 ORTHO05D003208 1.4e-23 114.0 230 37.8
Oeu054360.1 Olea europaea HOM05D002932 ORTHO05D003208 3.0e-21 106.3 265 35.1
SGA_v2.0_scaffold11G05690 Striga asiatica HOM05D002932 ORTHO05D003208 1.7e-19 100.5 249 35.3
Actinidia20171 Actinidia chinensis HOM05D002932 ORTHO05D003208 7.7e-17 91.7 262 33.6
Cc02_g38700 Coffea canephora HOM05D002932 ORTHO05D003208 2.2e-16 90.1 258 31.4
Oeu063673.2 Olea europaea HOM05D002932 ORTHO05D003208 2.2e-16 90.1 253 32.8
unitig_62.g23806 Utricularia gibba HOM05D001977 ORTHO05D002246 1.9e-15 87.0 232 35.8
Dinv43873 Davidia involucrata HOM05D002932 ORTHO05D003208 2.5e-15 86.7 273 31.5
unitig_0.g334 Utricularia gibba HOM05D002932 ORTHO05D003208 4.2e-15 85.9 235 37.4
Gohir.D08G148800 Gossypium hirsutum HOM05D002932 ORTHO05D003208 5.5e-15 85.5 244 32.4
Gorai.004G154500 Gossypium raimondii HOM05D002932 ORTHO05D003208 5.5e-15 85.5 244 32.4
Gohir.A08G127400 Gossypium hirsutum HOM05D002932 ORTHO05D003208 7.2e-15 85.1 244 32.0
CSS0002659 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 2.7e-14 83.2 254 32.7
Migut.B01809 Erythranthe guttata HOM05D002932 ORTHO05D003208 2.7e-14 83.2 171 39.2
Dinv32532 Davidia involucrata HOM05D002932 ORTHO05D003208 1.0e-13 81.3 264 30.7
CSS0013096 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 3.0e-13 79.7 249 32.9
Duzib133G1077 Durio zibethinus HOM05D002932 ORTHO05D003208 3.0e-13 79.7 251 34.3
Nitab4.5_0000305g0360 Nicotiana tabacum HOM05D002932 ORTHO05D003208 2.6e-12 76.6 276 31.5
Manes.01G251500 Manihot esculenta HOM05D002932 ORTHO05D003208 3.3e-12 76.3 252 32.1
PGR031G1724 Punica granatum HOM05D002932 ORTHO05D003208 9.7e-12 74.7 230 32.2
Cpa.g.sc3.12 Carica papaya HOM05D002932 ORTHO05D003208 1.3e-11 74.3 248 30.2
Manes.06G154700 Manihot esculenta HOM05D002932 ORTHO05D003208 2.2e-11 73.6 252 29.0
Hma1.2p1_0783F.1_g216930 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 2.8e-11 73.2 195 33.3
Potri.012G035200 Populus trichocarpa HOM05D002932 ORTHO05D003208 3.7e-11 72.8 252 27.8
Nitab4.5_0009475g0010 Nicotiana tabacum HOM05D002932 ORTHO05D003208 4.8e-11 72.4 274 31.0
DCAR_006952 Daucus carota HOM05D002932 ORTHO05D003208 6.3e-11 72.0 242 30.6
Duzib138G0190 Durio zibethinus HOM05D002932 ORTHO05D003208 6.3e-11 72.0 249 29.7
Atru.chr5.594 Acer truncatum HOM05D002932 ORTHO05D003208 8.2e-11 71.6 253 33.6
Peaxi162Scf00020g00174 Petunia axillaris HOM05D002932 ORTHO05D003208 1.4e-10 70.9 273 32.6
CAN.G78.138 Capsicum annuum HOM05D002932 ORTHO05D003208 2.4e-10 70.1 289 29.4
Actinidia03151 Actinidia chinensis HOM05D002932 ORTHO05D003208 3.1e-10 69.7 253 29.2
Sabra15G0019600 Salix brachista HOM05D002932 ORTHO05D003208 3.1e-10 69.7 254 28.0
Sabra12G0024300 Salix brachista HOM05D002932 ORTHO05D003208 4.1e-10 69.3 248 27.4
Sabra15G0022400 Salix brachista HOM05D002932 ORTHO05D003208 5.3e-10 68.9 254 27.6
PGSC0003DMG402000198 Solanum tuberosum HOM05D002932 ORTHO05D003208 5.3e-10 68.9 278 27.7
Duzib205G0983 Durio zibethinus HOM05D002932 ORTHO05D003208 7.0e-10 68.6 254 28.7
COL.COLO4_30256 Corchorus olitorius HOM05D002932 ORTHO05D003208 1.2e-09 67.8 253 28.9
Dinv35290 Davidia involucrata HOM05D002932 ORTHO05D003208 1.2e-09 67.8 253 29.6
Duzib084G0326 Durio zibethinus HOM05D002932 ORTHO05D003208 1.2e-09 67.8 255 28.6
Manes.14G020200 Manihot esculenta HOM05D002932 ORTHO05D003208 1.2e-09 67.8 249 28.5
GSVIVG01028788001 Vitis vinifera HOM05D003816 ORTHO05D004410 1.2e-09 67.8 257 30.0
Phvul.003G048900 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 1.6e-09 67.4 235 29.8
TAR374G1073 Trochodendron aralioides HOM05D002932 ORTHO05D003208 1.6e-09 67.4 253 28.5
vmacro06597 Vaccinium macrocarpon HOM05D002932 ORTHO05D003208 1.6e-09 67.4 253 27.7
CAN.G959.5 Capsicum annuum HOM05D000001 ORTHO05D014548 2.0e-09 67.0 282 29.8
Ciclev10023540m.g Citrus clementina HOM05D002932 ORTHO05D003208 2.0e-09 67.0 239 33.5
Glyma.09G126400 Glycine max HOM05D002932 ORTHO05D003208 2.0e-09 67.0 251 27.5
CSS0021611 Camellia sinensis var. sinensis HOM05D002932 ORTHO05D003208 2.7e-09 66.6 245 27.8
Sopen01g039030 Solanum pennellii HOM05D002932 ORTHO05D003208 2.7e-09 66.6 273 30.4
FAN10G0880 Fragaria x ananassa HOM05D002932 ORTHO05D003208 3.5e-09 66.2 261 28.7
FAN10G1573 Fragaria x ananassa HOM05D002932 ORTHO05D003208 3.5e-09 66.2 261 28.7
Gohir.D12G255000 Gossypium hirsutum HOM05D002932 ORTHO05D003208 3.5e-09 66.2 252 27.8
Gorai.008G272600 Gossypium raimondii HOM05D002932 ORTHO05D003208 3.5e-09 66.2 252 27.8
MD01G1211600 Malus domestica HOM05D002932 ORTHO05D003208 3.5e-09 66.2 254 25.6
Sabra14G0066400 Salix brachista HOM05D002932 ORTHO05D003208 3.5e-09 66.2 249 30.9
VMungo0464G0277 Vigna mungo HOM05D002932 ORTHO05D003208 4.5e-09 65.9 250 27.6
Dinv28362 Davidia involucrata HOM05D002932 ORTHO05D003208 5.9e-09 65.5 253 30.0
FvH4_7g30650 Fragaria vesca HOM05D002932 ORTHO05D003208 5.9e-09 65.5 263 28.9
FAN06G0995 Fragaria x ananassa HOM05D002932 ORTHO05D003208 5.9e-09 65.5 263 28.9
Phvul.004G102700 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 5.9e-09 65.5 250 27.6
Solyc01g095240.3 Solanum lycopersicum HOM05D002932 ORTHO05D003208 5.9e-09 65.5 274 30.3
QL09p012032 Quercus lobata HOM05D002932 ORTHO05D003208 7.7e-09 65.1 258 27.5
RcHm_v2.0_Chr1g0379591 Rosa chinensis HOM05D002932 ORTHO05D003208 7.7e-09 65.1 259 27.4
Ah.07g206300 Amaranthus hybridus HOM05D002932 ORTHO05D003208 1.0e-08 64.7 254 31.1
TPR.G7742 Trifolium pratense HOM05D002932 ORTHO05D003208 1.0e-08 64.7 256 29.7
Potri.014G091500 Populus trichocarpa HOM05D002932 ORTHO05D003208 1.3e-08 64.3 251 28.7
TAR629G3108 Trochodendron aralioides HOM05D002932 ORTHO05D003208 1.3e-08 64.3 250 31.2
COL.COLO4_06371 Corchorus olitorius HOM05D002932 ORTHO05D003208 1.7e-08 63.9 191 33.5
Potri.015G026600 Populus trichocarpa HOM05D002932 ORTHO05D003208 1.7e-08 63.9 252 27.0
Ah.13g069610 Amaranthus hybridus HOM05D002932 ORTHO05D003208 2.2e-08 63.5 251 27.9
EL10Ac3g05377 Beta vulgaris HOM05D002932 ORTHO05D003208 2.2e-08 63.5 256 30.5
FAN03G0587 Fragaria x ananassa HOM05D002932 ORTHO05D003208 2.2e-08 63.5 258 27.5
CANSAT21G2430 Cannabis sativa HOM05D002932 ORTHO05D003208 3.8e-08 62.8 260 26.2
Haze_15577 Corylus avellana HOM05D002932 ORTHO05D003208 3.8e-08 62.8 242 32.2
Haze_15582 Corylus avellana HOM05D002932 ORTHO05D003208 3.8e-08 62.8 242 32.2
Hma1.2p1_0142F.1_g064300 Hydrangea macrophylla HOM05D002932 ORTHO05D003208 3.8e-08 62.8 245 28.2
Sopen10g005630 Solanum pennellii HOM05D002932 ORTHO05D003208 3.8e-08 62.8 235 28.1
VMungo0251G1401 Vigna mungo HOM05D002932 ORTHO05D003208 3.8e-08 62.8 229 30.1
Gohir.A12G254433 Gossypium hirsutum HOM05D002932 ORTHO05D003208 5.0e-08 62.4 253 27.7
Thecc.03G188500 Theobroma cacao HOM05D002932 ORTHO05D003208 5.0e-08 62.4 254 27.6
Lalb_Chr01g0009541 Lupinus albus HOM05D002932 ORTHO05D003208 6.5e-08 62.0 249 26.9
Psat1g099240 Pisum sativum HOM05D002932 ORTHO05D003208 6.5e-08 62.0 258 27.9
Prupe.2G304400 Prunus persica HOM05D002932 ORTHO05D003208 6.5e-08 62.0 254 28.0
Sed0008251 Sechium edule HOM05D002932 ORTHO05D003208 6.5e-08 62.0 252 29.0
Cfa016327 Carpinus fangiana HOM05D002932 ORTHO05D003208 8.5e-08 61.6 255 28.2
Duzib068G0647 Durio zibethinus HOM05D002932 ORTHO05D003208 8.5e-08 61.6 254 28.0
Nn7g37319 Nelumbo nucifera HOM05D002932 ORTHO05D003208 8.5e-08 61.6 251 28.7
TAR636G0499 Trochodendron aralioides HOM05D002932 ORTHO05D003208 8.5e-08 61.6 249 27.7
Actinidia08604 Actinidia chinensis HOM05D002932 ORTHO05D003208 1.1e-07 61.2 252 27.8
CAN.G694.15 Capsicum annuum HOM05D001716 ORTHO05D003208 1.1e-07 61.2 268 31.0
Glyma.16G173400 Glycine max HOM05D002932 ORTHO05D003208 1.5e-07 60.8 251 27.9
MELO3C006960.2 Cucumis melo HOM05D002932 ORTHO05D003208 1.9e-07 60.5 259 29.3
CsaV3_3G021720 Cucumis sativus L. HOM05D002932 ORTHO05D003208 1.9e-07 60.5 259 29.3
Lalb_Chr04g0256131 Lupinus albus HOM05D002932 ORTHO05D003208 1.9e-07 60.5 244 28.7
Nn1g01736 Nelumbo nucifera HOM05D002932 ORTHO05D003208 1.9e-07 60.5 251 27.9
ClCG05G008540 Citrullus lanatus HOM05D002932 ORTHO05D003208 2.5e-07 60.1 255 30.2
Psat1g099320 Pisum sativum HOM05D002932 ORTHO05D003208 3.2e-07 59.7 255 24.3
Glyma.20G164000 Glycine max HOM05D002932 ORTHO05D003208 4.2e-07 59.3 249 26.1
Medtr1g099440 Medicago truncatula HOM05D002932 ORTHO05D003208 4.2e-07 59.3 252 29.0
Sed0015119 Sechium edule HOM05D002932 ORTHO05D003208 4.2e-07 59.3 256 29.7
Lj2g0001659 Lotus japonicus HOM05D002932 ORTHO05D003208 5.5e-07 58.9 253 26.5
Actinidia31853 Actinidia chinensis HOM05D002932 ORTHO05D003208 7.2e-07 58.5 199 29.1
CiPaw.02G036300 Carya illinoinensis HOM05D002932 ORTHO05D003208 7.2e-07 58.5 271 29.9
Haze_00079 Corylus avellana HOM05D002932 ORTHO05D003208 7.2e-07 58.5 256 27.3
Sopen03g003700 Solanum pennellii HOM05D002932 ORTHO05D003208 9.4e-07 58.2 242 25.6
Psat1g099360 Pisum sativum HOM05D002932 ORTHO05D003208 1.2e-06 57.8 258 27.1
Eucgr.K00306 Eucalyptus grandis HOM05D002932 ORTHO05D003208 1.6e-06 57.4 261 26.8
Phvul.007G077100 Phaseolus vulgaris HOM05D002932 ORTHO05D003208 1.6e-06 57.4 249 26.1
Solyc03g007775.2 Solanum lycopersicum HOM05D002932 ORTHO05D003208 1.6e-06 57.4 241 25.7
Glyma.08G299600 Glycine max HOM05D002932 ORTHO05D003208 2.1e-06 57.0 244 29.5
Glyma.10G229200 Glycine max HOM05D002932 ORTHO05D003208 2.1e-06 57.0 252 26.6
CiPaw.06G005800 Carya illinoinensis HOM05D002932 ORTHO05D003208 2.7e-06 56.6 256 26.2
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.7e-06 56.6 222 28.4
Psat0s694g0080 Pisum sativum HOM05D002932 ORTHO05D003208 2.7e-06 56.6 256 28.9
Ciclev10005884m.g Citrus clementina HOM05D002932 ORTHO05D003208 3.6e-06 56.2 205 27.3
Glyma.01G045900 Glycine max HOM05D002932 ORTHO05D003208 3.6e-06 56.2 241 28.6
Glyma.02G106200 Glycine max HOM05D002932 ORTHO05D003208 4.7e-06 55.8 242 29.8
CAN.G1578.6 Capsicum annuum HOM05D000129 ORTHO05D000997 6.1e-06 55.5 228 29.8
Glyma.18G121000 Glycine max HOM05D002932 ORTHO05D003208 6.1e-06 55.5 244 27.9
Psat1g106560 Pisum sativum HOM05D002932 ORTHO05D003208 6.1e-06 55.5 258 26.7
Rhsim03G0196300 Rhododendron simsii HOM05D002932 ORTHO05D003208 6.1e-06 55.5 256 25.4
Sed0004021 Sechium edule HOM05D002932 ORTHO05D003208 6.1e-06 55.5 237 29.1
PGSC0003DMG400019420 Solanum tuberosum HOM05D002932 ORTHO05D003208 6.1e-06 55.5 238 27.7
HanXRQChr16g0523761 Helianthus annuus HOM05D002932 ORTHO05D003208 8.0e-06 55.1 237 29.5
VMungo0720G0620 Vigna mungo HOM05D002932 ORTHO05D003208 8.0e-06 55.1 253 24.5


User provided reference genes

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