Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 1.2e-211 739.6 373 100.0
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 1.6e-168 596.3 413 78.0
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 6.9e-159 564.3 372 78.5
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 7.9e-155 550.8 372 76.9
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 2.6e-153 545.8 371 76.8
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.6e-153 545.8 371 77.9
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 3.3e-153 545.4 371 77.9
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 4.4e-153 545.0 370 77.0
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 4.8e-152 541.6 370 75.9
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 6.3e-152 541.2 372 75.5
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 9.1e-151 537.3 372 75.0
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 1.9e-148 529.6 375 73.3
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 4.2e-148 528.5 370 74.1
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 5.5e-148 528.1 334 80.8
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 5.2e-146 521.5 346 76.9
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 8.8e-146 520.8 344 77.6
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 1.1e-145 520.4 372 75.3
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.6e-145 519.2 380 73.9
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 4.4e-145 518.5 375 73.1
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 4.4e-145 518.5 346 76.3
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 4.4e-145 518.5 373 74.0
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 7.4e-145 517.7 381 73.0
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.8e-144 515.8 376 73.4
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 8.2e-144 514.2 373 74.0
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 1.4e-143 513.5 332 78.3
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 5.3e-143 511.5 373 73.7
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 5.3e-143 511.5 377 72.1
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 9.1e-143 510.8 364 74.7
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 2.0e-142 509.6 376 73.9
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.6e-142 509.2 373 71.8
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 2.6e-142 509.2 347 76.4
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.5e-142 508.8 370 73.0
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.5e-142 508.8 381 72.2
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 3.5e-142 508.8 383 71.3
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.0e-141 507.3 384 71.1
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.7e-141 506.5 380 72.6
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.2e-141 506.1 377 72.1
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 3.8e-141 505.4 377 71.6
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 8.5e-141 504.2 377 72.4
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 1.5e-140 503.4 374 71.7
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.5e-140 503.4 337 77.4
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.9e-140 503.1 373 71.8
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.9e-140 503.1 342 75.7
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 4.2e-140 501.9 362 74.0
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 2.1e-139 499.6 355 74.6
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 3.6e-139 498.8 374 72.5
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.7e-139 498.4 381 71.1
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 6.1e-139 498.0 355 74.6
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 8.0e-139 497.7 351 74.4
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.4e-138 496.9 381 71.1
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 1.4e-138 496.9 369 72.1
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 1.8e-138 496.5 377 71.6
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 5.2e-138 495.0 380 71.1
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 8.8e-138 494.2 371 72.2
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.2e-137 493.8 377 71.6
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.2e-137 493.8 377 71.6
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 2.0e-137 493.0 396 69.7
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 3.3e-137 492.3 378 71.4
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 3.3e-137 492.3 378 71.4
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 4.4e-137 491.9 326 77.3
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 1.3e-136 490.3 377 71.6
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.7e-136 490.0 372 71.8
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 1.7e-136 490.0 382 70.2
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 1.7e-136 490.0 352 73.6
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.7e-136 490.0 369 71.8
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.2e-136 489.6 373 71.3
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 2.8e-136 489.2 373 71.8
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 3.7e-136 488.8 370 71.9
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 3.7e-136 488.8 348 74.7
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 4.8e-136 488.4 340 75.3
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 8.2e-136 487.6 327 79.5
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.4e-135 486.1 374 70.9
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 5.3e-135 485.0 387 69.5
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 7.0e-135 484.6 380 69.5
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 7.0e-135 484.6 335 75.8
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.2e-134 483.8 378 70.1
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 2.7e-134 482.6 369 72.6
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 2.9e-133 479.2 378 68.3
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 1.9e-132 476.5 369 69.4
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 4.2e-132 475.3 367 70.3
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 5.5e-132 474.9 360 72.2
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 2.1e-131 473.0 362 70.7
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 4.7e-131 471.9 345 72.2
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 2.3e-130 469.5 372 68.8
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 1.5e-129 466.8 365 69.3
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 3.4e-129 465.7 377 66.6
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 4.4e-129 465.3 373 68.6
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 7.5e-129 464.5 329 72.9
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 9.8e-129 464.2 373 67.3
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.3e-128 463.8 343 70.6
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 2.8e-128 462.6 361 69.8
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.7e-128 462.2 384 67.7
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.4e-127 460.3 330 73.9
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 2.7e-126 456.1 310 75.8
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 1.1e-124 450.7 323 74.3
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 9.5e-124 447.6 275 82.9
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 2.8e-123 446.0 365 67.4
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 5.2e-122 441.8 336 71.7
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.4e-121 438.7 336 71.4
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 2.7e-118 429.5 370 63.8
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 1.0e-117 427.6 283 79.2
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 2.0e-113 413.3 291 73.5
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 9.8e-113 411.0 284 72.2
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.0e-109 401.0 277 71.8
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 3.9e-109 399.1 336 66.4
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 2.8e-107 392.9 330 63.0
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 2.0e-102 376.7 234 83.8
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 4.6e-102 375.6 282 66.3
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 2.2e-96 356.7 287 66.6
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.9e-96 355.5 288 65.3
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 2.6e-89 333.2 207 80.7
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 6.2e-83 312.0 281 59.4
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 3.1e-82 309.7 249 61.0
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 1.4e-79 300.8 264 56.4
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.6e-78 297.4 230 70.9
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 4.8e-75 285.8 276 59.4
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 5.3e-74 282.3 228 67.1
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 4.6e-70 269.2 209 68.4
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.1e-68 264.6 250 60.8
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 3.5e-62 243.0 187 67.9
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 1.3e-59 234.6 156 78.8
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 8.2e-59 231.9 184 67.9
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 2.2e-56 223.8 184 66.3
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 4.6e-54 216.1 190 67.4
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.8e-51 206.8 203 56.7
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 4.1e-50 203.0 116 87.9
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 2.3e-45 187.2 109 85.3
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 5.1e-45 186.0 134 73.9
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.1e-36 158.3 114 68.4
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 6.5e-32 142.5 245 37.1
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 6.1e-30 136.0 238 34.5
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.6e-25 120.6 190 45.3
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 1.3e-24 118.2 241 32.8
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.9e-24 117.1 75 78.7
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.2e-22 111.7 156 44.9
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 1.0e-21 108.6 167 38.3
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 2.4e-18 97.4 85 60.0
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 5.3e-18 96.3 50 92.0
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.7e-17 92.4 62 74.2
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.7e-11 74.7 109 48.6


User provided reference genes

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