Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02233 Striga asiatica HOM05D008423 ORTHO05D010599 3.1e-63 245.0 126 100.0
Migut.N01658 Erythranthe guttata HOM05D008423 ORTHO05D010599 6.6e-29 131.0 129 58.9
MSTRG.28099 Avicennia marina HOM05D008423 ORTHO05D010599 9.0e-18 94.0 127 48.0
Hma1.2p1_0505F.1_g168150 Hydrangea macrophylla HOM05D008423 ORTHO05D010599 5.4e-15 84.7 130 42.3
SalBow4G0198 Salvia bowleyana HOM05D008423 ORTHO05D010599 5.4e-15 84.7 111 46.8
Peaxi162Scf00245g01314 Petunia axillaris HOM05D008423 ORTHO05D010599 2.3e-13 79.3 127 44.9
Nitab4.5_0000050g0280 Nicotiana tabacum HOM05D008423 ORTHO05D010599 8.7e-13 77.4 120 45.0
Actinidia31712 Actinidia chinensis HOM05D008423 ORTHO05D010599 1.9e-12 76.3 135 43.0
Cc02_g26950 Coffea canephora HOM05D008423 ORTHO05D010599 3.3e-12 75.5 111 45.9
Nn7g36010 Nelumbo nucifera HOM05D008423 ORTHO05D010599 9.6e-12 73.9 104 44.2
Manes.10G151900 Manihot esculenta HOM05D008423 ORTHO05D010599 8.1e-11 70.9 128 39.1
COL.COLO4_25062 Corchorus olitorius HOM05D008423 ORTHO05D010599 1.1e-10 70.5 61 62.3
Potri.001G230200 Populus trichocarpa HOM05D008423 ORTHO05D010599 1.8e-10 69.7 116 40.5
Rhsim07G0049900 Rhododendron simsii HOM05D008423 ORTHO05D010599 9.0e-10 67.4 137 41.6
Duzib114G0357 Durio zibethinus HOM05D008423 ORTHO05D010599 2.0e-09 66.2 65 52.3
Thecc.01G416500 Theobroma cacao HOM05D008423 ORTHO05D010599 2.6e-09 65.9 67 52.2
CANSAT11G0957 Cannabis sativa HOM05D008423 ORTHO05D010599 3.4e-09 65.5 129 35.7
QL04p001302 Quercus lobata HOM05D008423 ORTHO05D010599 4.5e-09 65.1 75 52.0
unitig_8.g3323 Utricularia gibba HOM05D008423 ORTHO05D010599 5.8e-09 64.7 111 37.8
QL04p001438 Quercus lobata HOM05D008423 ORTHO05D010599 7.6e-09 64.3 137 39.4
Solyc10g045320.2 Solanum lycopersicum HOM05D008423 ORTHO05D010599 7.6e-09 64.3 96 39.6
Lj3g0025495 Lotus japonicus HOM05D008423 ORTHO05D010599 1.7e-08 63.2 103 38.8
Prupe.2G003000 Prunus persica HOM05D008423 ORTHO05D010599 1.7e-08 63.2 125 35.2
GSVIVG01001359001 Vitis vinifera HOM05D008423 ORTHO05D010599 1.7e-08 63.2 68 51.5
FvH4_7g00090 Fragaria vesca HOM05D008423 ORTHO05D010599 2.9e-08 62.4 96 42.7
FAN06G2169 Fragaria x ananassa HOM05D008423 ORTHO05D010599 2.9e-08 62.4 96 42.7
Ciclev10033102m.g Citrus clementina HOM05D008423 ORTHO05D010599 3.8e-08 62.0 65 53.8
Lalb_Chr25g0283631 Lupinus albus HOM05D008423 ORTHO05D010599 3.8e-08 62.0 65 52.3
Sopen10g014490 Solanum pennellii HOM05D008423 ORTHO05D010599 3.8e-08 62.0 96 38.5
FAN01G1593 Fragaria x ananassa HOM05D008423 ORTHO05D010599 6.4e-08 61.2 89 42.7
FAN03G2952 Fragaria x ananassa HOM05D008423 ORTHO05D010599 6.4e-08 61.2 89 42.7
Psat1g127160 Pisum sativum HOM05D008423 ORTHO05D010599 6.4e-08 61.2 77 50.6
Lsat_1_v5_gn_7_35900 Lactuca sativa HOM05D008423 ORTHO05D010599 1.4e-07 60.1 99 38.4
Medtr2g061490 Medicago truncatula HOM05D008423 ORTHO05D010599 1.9e-07 59.7 71 49.3
Medtr2g061510 Medicago truncatula HOM05D008423 ORTHO05D010599 1.9e-07 59.7 71 49.3
TPR.G16173 Trifolium pratense HOM05D008423 ORTHO05D010599 2.4e-07 59.3 71 49.3
Glyma.08G157600 Glycine max HOM05D008423 ORTHO05D010599 3.2e-07 58.9 77 44.2
TWI73G0904 Tripterygium wilfordii HOM05D008423 ORTHO05D010599 1.2e-06 57.0 40 62.5
PSO384G0182 Papaver somniferum HOM05D008423 ORTHO05D010599 1.6e-06 56.6 130 35.4
Phvul.005G041500 Phaseolus vulgaris HOM05D008423 ORTHO05D010599 2.1e-06 56.2 68 47.1
MD02G1319200 Malus domestica HOM05D008423 ORTHO05D010599 6.0e-06 54.7 87 39.1
ClCG09G003740 Citrullus lanatus HOM05D008423 ORTHO05D010599 7.9e-06 54.3 116 33.6
ECA236G1240 Erigeron canadensis HOM05D008423 ORTHO05D010599 7.9e-06 54.3 85 38.8


User provided reference genes

Program Settings