Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02202 Striga asiatica HOM05D008143 ORTHO05D010256 7.0e-64 247.3 139 100.0
Oeu020235.1 Olea europaea HOM05D008143 ORTHO05D010256 4.0e-19 98.6 137 51.8
PGSC0003DMG400001819 Solanum tuberosum HOM05D008143 ORTHO05D010256 2.0e-18 96.3 78 69.2
Nitab4.5_0001209g0030 Nicotiana tabacum HOM05D008143 ORTHO05D010256 2.6e-18 95.9 125 55.2
Solyc01g080950.3 Solanum lycopersicum HOM05D008143 ORTHO05D010256 7.6e-18 94.4 78 69.2
Sopen01g032540 Solanum pennellii HOM05D008143 ORTHO05D010256 7.6e-18 94.4 78 69.2
CAN.G700.4 Capsicum annuum HOM05D008143 ORTHO05D010256 1.9e-16 89.7 106 55.7
Migut.N01697 Erythranthe guttata HOM05D008143 ORTHO05D010256 4.2e-16 88.6 162 42.0
MSTRG.28120 Avicennia marina HOM05D008143 ORTHO05D010256 1.2e-15 87.0 135 49.6
Dinv43549 Davidia involucrata HOM05D000307 ORTHO05D010256 2.1e-15 86.3 70 68.6
Dinv43557 Davidia involucrata HOM05D008143 ORTHO05D010256 2.1e-15 86.3 70 68.6
Migut.N01814 Erythranthe guttata HOM05D008143 ORTHO05D010256 2.7e-15 85.9 69 69.6
Dinv43993 Davidia involucrata HOM05D008143 ORTHO05D010256 2.3e-14 82.8 89 57.3
Cc02_g26140 Coffea canephora HOM05D008143 ORTHO05D010256 8.7e-14 80.9 137 46.7
Aqoxy3G02407 Aquilegia oxysepala HOM05D008143 ORTHO05D010256 3.3e-13 79.0 76 61.8
Ca_26206_v3 Cicer arietinum L. HOM05D008143 ORTHO05D010256 4.3e-13 78.6 70 60.0
Peaxi162Scf01110g00012 Petunia axillaris HOM05D008143 ORTHO05D010256 5.6e-13 78.2 132 51.5
Sed0007849 Sechium edule HOM05D000473 ORTHO05D009707 9.6e-13 77.4 114 50.0
Ciclev10023977m.g Citrus clementina HOM05D008143 ORTHO05D010256 1.3e-12 77.0 80 56.2
HanXRQChr01g0020571 Helianthus annuus HOM05D008143 ORTHO05D010256 2.1e-12 76.3 77 53.2
Atru.chr5.8 Acer truncatum HOM05D008143 ORTHO05D010256 2.8e-12 75.9 70 60.0
Medtr7g034335 Medicago truncatula HOM05D008143 ORTHO05D010256 2.8e-12 75.9 89 51.7
TAR636G2193 Trochodendron aralioides HOM05D008143 ORTHO05D010256 2.8e-12 75.9 115 54.8
Cpa.g.sc41.41 Carica papaya HOM05D008143 ORTHO05D010256 3.6e-12 75.5 97 50.5
ECA248G2885 Erigeron canadensis HOM05D008143 ORTHO05D010256 8.1e-12 74.3 76 53.9
Sabra14G0137200 Salix brachista HOM05D008143 ORTHO05D010256 1.1e-11 73.9 70 68.6
CiPaw.14G012000 Carya illinoinensis HOM05D008143 ORTHO05D010256 1.4e-11 73.6 106 48.1
ClCG05G002660 Citrullus lanatus HOM05D008143 ORTHO05D010256 1.8e-11 73.2 74 70.3
Hma1.2p1_0076F.1_g039560 Hydrangea macrophylla HOM05D008143 ORTHO05D010256 1.8e-11 73.2 85 55.3
TWI59G0267 Tripterygium wilfordii HOM05D008143 ORTHO05D010256 2.4e-11 72.8 70 62.9
Sabra14G0139000 Salix brachista HOM05D008143 ORTHO05D010256 4.0e-11 72.0 70 67.1
GSVIVG01026763001 Vitis vinifera HOM05D008143 ORTHO05D010256 4.0e-11 72.0 73 57.5
Nn1g00548 Nelumbo nucifera HOM05D008143 ORTHO05D010256 5.3e-11 71.6 70 65.7
SHI04152 Sapria himalayana HOM05D008143 ORTHO05D010256 6.9e-11 71.2 96 50.0
MELO3C006232.2 Cucumis melo HOM05D008143 ORTHO05D010256 9.0e-11 70.9 117 55.6
Sed0022797 Sechium edule HOM05D008143 ORTHO05D010256 2.0e-10 69.7 62 74.2
Lj1g0022952 Lotus japonicus HOM05D008143 ORTHO05D010256 2.6e-10 69.3 70 54.3
CiPaw.13G019200 Carya illinoinensis HOM05D008143 ORTHO05D010256 3.4e-10 68.9 97 53.6
Prupe.2G109300 Prunus persica HOM05D008143 ORTHO05D010256 3.4e-10 68.9 109 43.1
PGR042G2567 Punica granatum HOM05D008143 ORTHO05D010256 3.4e-10 68.9 80 50.0
Psat3g161880 Pisum sativum HOM05D008143 ORTHO05D010256 4.4e-10 68.6 70 52.9
Nn6g33614 Nelumbo nucifera HOM05D008143 ORTHO05D010256 5.8e-10 68.2 69 63.8
CsaV3_3G010110 Cucumis sativus L. HOM05D008143 ORTHO05D010256 7.6e-10 67.8 112 52.7
Duzib128G1063 Durio zibethinus HOM05D008143 ORTHO05D010256 7.6e-10 67.8 85 57.6
Glyma.06G310300 Glycine max HOM05D008143 ORTHO05D010256 1.7e-09 66.6 71 54.9
Glyma.04G128500 Glycine max HOM05D008143 ORTHO05D010256 2.2e-09 66.2 98 42.9
FAN10G1551 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.8e-09 65.5 81 49.4
Thecc.10G157800 Theobroma cacao HOM05D008143 ORTHO05D010256 3.8e-09 65.5 74 59.5
QL04p024258 Quercus lobata HOM05D008143 ORTHO05D010256 4.9e-09 65.1 95 44.2
Potri.014G178900 Populus trichocarpa HOM05D008143 ORTHO05D010256 8.4e-09 64.3 118 47.5
FvH4_7g08030 Fragaria vesca HOM05D008143 ORTHO05D010256 1.1e-08 63.9 90 44.4
FAN01G0067 Fragaria x ananassa HOM05D008143 ORTHO05D010256 1.1e-08 63.9 90 44.4
DCAR_015763 Daucus carota HOM05D008143 ORTHO05D010256 1.4e-08 63.5 70 55.7
MD00G1098100 Malus domestica HOM05D008143 ORTHO05D010256 1.9e-08 63.2 105 41.9
Actinidia21604 Actinidia chinensis HOM05D008143 ORTHO05D010256 3.2e-08 62.4 110 45.5
FAN03G3180 Fragaria x ananassa HOM05D008143 ORTHO05D010256 3.2e-08 62.4 81 46.9
PSO017G2691 Papaver somniferum HOM05D008143 ORTHO05D010256 7.1e-08 61.2 86 46.5
arahy.Tifrunner.gnm1.ann1.3N3IDJ Arachis hypogaea HOM05D008143 ORTHO05D010256 9.3e-08 60.8 110 40.9
arahy.Tifrunner.gnm1.ann1.H93UBA Arachis hypogaea HOM05D008143 ORTHO05D010256 1.6e-07 60.1 110 40.9
RcHm_v2.0_Chr1g0341271 Rosa chinensis HOM05D008143 ORTHO05D010256 2.7e-07 59.3 100 43.0
Lalb_Chr19g0126471 Lupinus albus HOM05D008143 ORTHO05D010256 6.0e-07 58.2 96 40.6
PSO170G4801 Papaver somniferum HOM05D008143 ORTHO05D010256 6.0e-07 58.2 86 51.2
Phvul.005G016300 Phaseolus vulgaris HOM05D008143 ORTHO05D010256 6.0e-07 58.2 82 50.0
Sabra05G0099100 Salix brachista HOM05D008143 ORTHO05D010256 1.3e-06 57.0 64 62.5


User provided reference genes

Program Settings