Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 6.8e-128 460.7 234 100.0
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 2.3e-99 365.9 286 72.0
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 3.0e-59 232.6 233 60.5
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 3.0e-59 232.6 233 60.5
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 6.7e-59 231.5 233 60.1
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 6.7e-59 231.5 233 60.1
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.1e-58 230.7 234 59.4
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.1e-58 230.7 233 59.7
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 1.1e-58 230.7 233 60.1
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.1e-58 230.7 233 60.1
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.1e-58 230.7 233 60.1
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 1.1e-58 230.7 233 59.7
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.1e-58 230.7 233 59.7
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.9e-58 229.9 233 59.7
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 1.9e-58 229.9 233 59.7
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 3.3e-58 229.2 233 59.7
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 3.3e-58 229.2 233 59.2
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 3.3e-58 229.2 233 59.2
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.3e-58 228.8 233 58.8
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 4.3e-58 228.8 233 59.7
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 4.3e-58 228.8 234 59.4
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 4.3e-58 228.8 233 59.2
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 4.3e-58 228.8 233 59.7
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 5.7e-58 228.4 233 58.4
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 5.7e-58 228.4 233 59.7
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 7.4e-58 228.0 233 58.8
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.3e-57 227.3 233 58.8
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.3e-57 227.3 239 57.7
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 1.3e-57 227.3 233 58.4
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 1.6e-57 226.9 234 59.0
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 1.6e-57 226.9 233 58.8
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.6e-57 226.9 233 58.4
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 2.1e-57 226.5 233 58.8
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.1e-57 226.5 233 58.8
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.8e-57 226.1 233 57.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 2.8e-57 226.1 233 58.8
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 4.8e-57 225.3 233 58.4
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 4.8e-57 225.3 233 59.2
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 4.8e-57 225.3 227 59.5
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 6.3e-57 224.9 233 57.9
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 6.3e-57 224.9 233 57.9
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 6.3e-57 224.9 234 58.5
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 6.3e-57 224.9 233 58.8
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 8.2e-57 224.6 233 57.9
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.4e-56 223.8 231 57.1
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.4e-56 223.8 231 58.4
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 1.4e-56 223.8 231 58.4
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 1.4e-56 223.8 231 58.4
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.4e-56 223.8 233 57.9
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 1.8e-56 223.4 239 58.2
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.8e-56 223.4 233 57.9
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 2.4e-56 223.0 233 57.9
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 2.4e-56 223.0 233 57.1
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 4.1e-56 222.2 233 57.9
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 5.3e-56 221.9 233 57.5
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 5.3e-56 221.9 233 57.5
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 5.3e-56 221.9 233 57.5
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 5.3e-56 221.9 233 57.5
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 5.3e-56 221.9 232 57.8
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 6.9e-56 221.5 229 57.6
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 1.2e-55 220.7 233 57.1
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.5e-55 220.3 233 57.5
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 2.0e-55 219.9 233 57.1
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 2.6e-55 219.5 233 55.4
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 5.0e-54 215.3 246 54.5
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 6.5e-54 214.9 231 56.3
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 8.5e-54 214.5 233 57.5
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.4e-53 213.8 232 57.3
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 1.9e-53 213.4 246 54.1
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 4.2e-53 212.2 233 54.9
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.5e-53 211.8 227 54.6
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 7.2e-53 211.5 233 54.5
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 7.2e-53 211.5 231 53.2
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.2e-52 210.7 232 56.5
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.6e-52 210.3 228 55.3
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 2.1e-52 209.9 251 53.4
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 6.1e-52 208.4 220 57.7
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 2.5e-50 203.0 220 54.5
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 5.7e-50 201.8 230 53.0
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.6e-49 200.3 225 55.6
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.8e-49 199.5 240 54.2
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 4.8e-49 198.7 214 57.0
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.6e-47 193.0 227 53.3
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 5.9e-47 191.8 210 56.7
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 7.7e-47 191.4 215 54.9
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.3e-46 190.7 210 56.7
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 1.3e-46 190.7 214 54.7
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 2.9e-46 189.5 232 48.7
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.9e-46 189.5 210 56.2
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 1.0e-43 181.0 101 91.1
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 5.1e-43 178.7 95 94.7
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 5.1e-43 178.7 95 94.7
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.0e-42 176.8 95 93.7
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.0e-42 176.8 95 93.7
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.6e-42 176.4 250 51.2
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 3.3e-42 176.0 203 53.2
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 9.7e-42 174.5 202 54.0
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.7e-41 173.7 202 53.0
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 2.8e-41 172.9 203 53.7
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 8.2e-41 171.4 202 53.0
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 2.0e-39 166.8 101 82.2
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.6e-36 157.1 191 52.4
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 2.7e-36 156.4 233 46.8
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 6.7e-35 151.8 233 45.9
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 7.4e-34 148.3 231 44.6
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 5.3e-32 142.1 75 93.3
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 9.1e-32 141.4 75 93.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 3.5e-31 139.4 232 37.9
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.2e-28 131.0 233 39.1
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 1.0e-27 127.9 229 38.0
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 1.3e-25 120.9 73 82.2
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.8e-24 117.1 172 46.5
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 1.6e-23 114.0 173 46.2
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 6.5e-14 82.0 41 92.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 8.6e-14 81.6 40 92.5
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.8e-12 76.6 38 86.8
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 2.6e-10 70.1 44 81.8
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.5e-10 68.6 39 79.5
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 6.3e-09 65.5 35 85.7
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 1.0e-06 58.2 55 58.2


User provided reference genes

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