Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.6e-65 252.7 137 100.0
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 1.4e-43 179.9 138 76.8
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 3.9e-43 178.3 137 75.2
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 1.8e-40 169.5 134 74.6
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 3.2e-37 158.7 143 70.6
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 6.1e-36 154.5 120 79.2
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 5.1e-35 151.4 153 62.1
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 5.1e-35 151.4 153 62.1
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 8.8e-35 150.6 143 65.7
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 2.0e-34 149.4 157 59.2
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 4.4e-34 148.3 104 83.7
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 5.7e-34 147.9 103 80.6
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 7.4e-34 147.5 103 79.6
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 2.8e-33 145.6 105 81.9
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 4.8e-33 144.8 145 63.4
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 6.3e-33 144.4 131 67.2
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 6.3e-33 144.4 129 69.0
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 8.2e-33 144.1 129 69.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 8.2e-33 144.1 103 75.7
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.4e-32 143.3 104 80.8
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 1.8e-32 142.9 114 74.6
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 1.8e-32 142.9 108 75.9
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 1.8e-32 142.9 104 79.8
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 2.4e-32 142.5 132 68.2
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 4.1e-32 141.7 105 79.0
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 5.3e-32 141.4 111 73.9
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 5.3e-32 141.4 103 79.6
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 5.3e-32 141.4 130 66.9
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 5.3e-32 141.4 115 74.8
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 7.0e-32 141.0 103 79.6
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 9.1e-32 140.6 104 78.8
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.2e-31 140.2 104 80.8
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.5e-31 139.8 147 60.5
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 2.0e-31 139.4 103 79.6
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 3.5e-31 138.7 103 80.6
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 4.5e-31 138.3 106 78.3
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 4.5e-31 138.3 115 73.9
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 4.5e-31 138.3 104 76.9
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 4.5e-31 138.3 104 76.9
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 5.9e-31 137.9 113 75.2
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 7.7e-31 137.5 115 73.0
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 7.7e-31 137.5 115 73.0
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 7.7e-31 137.5 103 75.7
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 7.7e-31 137.5 141 63.1
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 7.7e-31 137.5 139 59.7
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.3e-30 136.7 99 82.8
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.3e-30 136.7 122 69.7
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 1.7e-30 136.3 106 77.4
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 1.7e-30 136.3 102 80.4
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 2.2e-30 136.0 135 62.2
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 2.9e-30 135.6 110 73.6
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 3.8e-30 135.2 103 78.6
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 5.0e-30 134.8 145 59.3
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 5.0e-30 134.8 106 76.4
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 5.0e-30 134.8 106 76.4
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 6.5e-30 134.4 148 62.8
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 6.5e-30 134.4 108 75.0
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 8.5e-30 134.0 102 78.4
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 8.5e-30 134.0 121 66.1
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.1e-29 133.7 107 73.8
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 1.1e-29 133.7 97 80.4
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 1.9e-29 132.9 145 61.4
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 2.5e-29 132.5 123 67.5
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 2.5e-29 132.5 111 73.0
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 2.5e-29 132.5 139 63.3
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 3.2e-29 132.1 103 58.3
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 3.2e-29 132.1 103 75.7
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 3.2e-29 132.1 112 70.5
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 4.2e-29 131.7 98 80.6
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 5.5e-29 131.3 109 73.4
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 7.2e-29 131.0 118 68.6
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 7.2e-29 131.0 103 76.7
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 9.4e-29 130.6 103 74.8
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 9.4e-29 130.6 100 77.0
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 9.4e-29 130.6 100 77.0
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 9.4e-29 130.6 102 75.5
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 9.4e-29 130.6 133 60.2
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 9.4e-29 130.6 103 71.8
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 1.2e-28 130.2 105 73.3
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 2.7e-28 129.0 140 60.0
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 2.7e-28 129.0 180 52.2
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 3.6e-28 128.6 101 76.2
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 4.7e-28 128.3 101 74.3
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 6.1e-28 127.9 104 76.0
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 6.1e-28 127.9 103 76.7
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 8.0e-28 127.5 98 77.6
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 8.0e-28 127.5 100 77.0
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.4e-27 126.7 98 79.6
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 1.8e-27 126.3 102 75.5
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.3e-27 125.9 71 76.1
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 3.0e-27 125.6 99 74.7
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 3.0e-27 125.6 99 74.7
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 1.5e-26 123.2 102 74.5
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 7.4e-26 120.9 88 79.5
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 3.1e-24 115.5 94 76.6
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 2.6e-23 112.5 67 71.6
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.9e-23 111.3 80 82.5
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 3.8e-22 108.6 142 54.9
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 8.5e-22 107.5 85 74.1
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 5.5e-21 104.8 73 86.3
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 4.7e-20 101.7 117 55.6
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 6.1e-20 101.3 139 52.5
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 5.2e-19 98.2 73 82.2
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 8.8e-19 97.4 81 70.4
Gohir.A05G061100 Gossypium hirsutum HOM05D007253 ORTHO05D009055 4.8e-09 65.1 41 70.7


User provided reference genes

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