Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02123 Striga asiatica HOM05D006899 ORTHO05D008566 1.6e-95 352.8 187 100.0
SalBow7G1887 Salvia bowleyana HOM05D006899 ORTHO05D008566 1.2e-63 246.9 188 72.9
MSTRG.12841 Avicennia marina HOM05D006899 ORTHO05D008566 5.2e-62 241.5 187 73.3
Migut.E01772 Erythranthe guttata HOM05D006899 ORTHO05D008566 1.2e-55 220.3 185 67.0
Oeu020934.1 Olea europaea HOM05D006899 ORTHO05D008566 3.6e-55 218.8 188 69.1
Oeu013822.1 Olea europaea HOM05D006899 ORTHO05D008566 4.7e-55 218.4 188 69.1
Nitab4.5_0002251g0050 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.0e-50 203.0 144 76.4
Nitab4.5_0001883g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 8.5e-49 197.6 144 74.3
PGSC0003DMG400017304 Solanum tuberosum HOM05D006899 ORTHO05D008566 3.2e-48 195.7 145 75.2
Peaxi162Scf00111g00221 Petunia axillaris HOM05D006899 ORTHO05D008566 9.4e-48 194.1 144 73.6
Solyc07g056240.3 Solanum lycopersicum HOM05D006899 ORTHO05D008566 9.4e-48 194.1 145 74.5
Sopen07g029600 Solanum pennellii HOM05D006899 ORTHO05D008566 2.7e-47 192.6 145 74.5
Gohir.D07G086300 Gossypium hirsutum HOM05D006899 ORTHO05D008566 4.7e-47 191.8 195 59.5
Cc05_g09700 Coffea canephora HOM05D006899 ORTHO05D008566 8.0e-47 191.0 185 62.7
Gohir.A07G080700 Gossypium hirsutum HOM05D006899 ORTHO05D008566 1.8e-46 189.9 195 58.5
Gorai.001G092300 Gossypium raimondii HOM05D006899 ORTHO05D008566 1.8e-46 189.9 154 68.8
Cfa023072 Carpinus fangiana HOM05D006899 ORTHO05D008566 2.3e-46 189.5 189 61.9
Potri.005G204200 Populus trichocarpa HOM05D006899 ORTHO05D008566 4.0e-46 188.7 181 65.2
QL08p044873 Quercus lobata HOM05D006899 ORTHO05D008566 2.0e-45 186.4 140 72.9
Potri.002G058000 Populus trichocarpa HOM05D006899 ORTHO05D008566 5.7e-45 184.9 154 68.8
CiPaw.04G138700 Carya illinoinensis HOM05D006899 ORTHO05D008566 2.2e-44 183.0 188 59.6
PGR042G1005 Punica granatum HOM05D006899 ORTHO05D008566 2.8e-44 182.6 191 61.3
Rhsim04G0081600 Rhododendron simsii HOM05D006899 ORTHO05D008566 2.8e-44 182.6 146 71.9
MD17G1136600 Malus domestica HOM05D006899 ORTHO05D008566 3.7e-44 182.2 149 67.8
TAR627G0648 Trochodendron aralioides HOM05D006899 ORTHO05D008566 4.9e-44 181.8 188 57.4
CsaV3_4G031920 Cucumis sativus L. HOM05D006899 ORTHO05D008566 6.3e-44 181.4 175 61.1
MD09G1149700 Malus domestica HOM05D006899 ORTHO05D008566 6.3e-44 181.4 149 68.5
MELO3C026968.2 Cucumis melo HOM05D006899 ORTHO05D008566 1.1e-43 180.6 154 68.2
Nn4g26539 Nelumbo nucifera HOM05D006899 ORTHO05D008566 1.1e-43 180.6 194 57.2
LjContig00049g0021241 Lotus japonicus HOM05D006899 ORTHO05D008566 1.8e-43 179.9 187 59.4
VMungo0647G1903 Vigna mungo HOM05D006899 ORTHO05D008566 1.8e-43 179.9 143 71.3
Phvul.008G193700 Phaseolus vulgaris HOM05D006899 ORTHO05D008566 5.4e-43 178.3 143 71.3
Haze_13530 Corylus avellana HOM05D006899 ORTHO05D008566 1.2e-42 177.2 123 78.0
Glyma.02G285100 Glycine max HOM05D006899 ORTHO05D008566 1.6e-42 176.8 143 71.3
Prupe.3G176400 Prunus persica HOM05D006899 ORTHO05D008566 1.6e-42 176.8 145 69.7
GSVIVG01020847001 Vitis vinifera HOM05D006899 ORTHO05D008566 2.0e-42 176.4 194 58.2
Cpa.g.sc50.104 Carica papaya HOM05D006899 ORTHO05D008566 3.5e-42 175.6 138 72.5
Glyma.14G029700 Glycine max HOM05D006899 ORTHO05D008566 3.5e-42 175.6 143 69.9
vmacro09192 Vaccinium macrocarpon HOM05D006899 ORTHO05D008566 3.5e-42 175.6 189 60.3
Sed0025977 Sechium edule HOM05D006899 ORTHO05D008566 1.0e-41 174.1 177 61.0
Sabra02G0047300 Salix brachista HOM05D006899 ORTHO05D008566 1.3e-41 173.7 145 69.0
Aa31LG1G24750 Aethionema arabicum HOM05D006899 ORTHO05D008566 2.9e-41 172.6 189 59.3
TPR.G12679 Trifolium pratense HOM05D006899 ORTHO05D008566 2.9e-41 172.6 181 56.9
Atru.chr6.2058 Acer truncatum HOM05D006899 ORTHO05D008566 6.6e-41 171.4 119 78.2
arahy.Tifrunner.gnm1.ann1.SNQ1P9 Arachis hypogaea HOM05D006899 ORTHO05D008566 6.6e-41 171.4 188 57.4
BraA04t18701Z Brassica rapa HOM05D006899 ORTHO05D008566 6.6e-41 171.4 152 65.8
Medtr5g091190 Medicago truncatula HOM05D006899 ORTHO05D008566 6.6e-41 171.4 184 57.6
FAN09G4704 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.6e-41 171.0 185 57.3
Hund24233 Selenicereus undatus HOM05D006899 ORTHO05D008566 8.6e-41 171.0 163 63.2
Thecc.01G170200 Theobroma cacao HOM05D006899 ORTHO05D008566 1.1e-40 170.6 192 58.9
Ciclev10032884m.g Citrus clementina HOM05D006899 ORTHO05D008566 1.5e-40 170.2 120 75.8
TWI59G0652 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.5e-40 170.2 148 66.9
AT2G42975 Arabidopsis thaliana HOM05D006899 ORTHO05D008566 2.5e-40 169.5 197 57.9
arahy.Tifrunner.gnm1.ann1.226PX6 Arachis hypogaea HOM05D006899 ORTHO05D008566 2.5e-40 169.5 188 57.4
CANSAT64G2357 Cannabis sativa HOM05D006899 ORTHO05D008566 3.3e-40 169.1 149 64.4
COL.COLO4_08896 Corchorus olitorius HOM05D006899 ORTHO05D008566 3.3e-40 169.1 157 67.5
FAN05G4631 Fragaria x ananassa HOM05D006899 ORTHO05D008566 3.3e-40 169.1 185 56.8
AL4G41610 Arabidopsis lyrata HOM05D006899 ORTHO05D008566 4.3e-40 168.7 121 77.7
Carub.0004s2544 Capsella rubella HOM05D006899 ORTHO05D008566 5.6e-40 168.3 123 74.8
FvH4_6g38570 Fragaria vesca HOM05D006899 ORTHO05D008566 5.6e-40 168.3 185 56.2
Sp4g25100 Schrenkiella parvula HOM05D006899 ORTHO05D008566 5.6e-40 168.3 194 57.2
BcaC02g07213 Brassica carinata HOM05D006899 ORTHO05D008566 9.5e-40 167.5 135 70.4
BNapus_Darmor_BZH_scaffold_64p00160 Brassica napus HOM05D006899 ORTHO05D008566 9.5e-40 167.5 122 76.2
C04p70000 Brassica napus HOM05D006899 ORTHO05D008566 9.5e-40 167.5 135 70.4
BolC4t28500H Brassica oleracea HOM05D006899 ORTHO05D008566 9.5e-40 167.5 135 70.4
Manes.10G088300 Manihot esculenta HOM05D006899 ORTHO05D008566 2.1e-39 166.4 159 63.5
RcHm_v2.0_Chr2g0151981 Rosa chinensis HOM05D006899 ORTHO05D008566 4.7e-39 165.2 149 63.8
BcaB06g29274 Brassica carinata HOM05D006899 ORTHO05D008566 6.1e-39 164.9 127 74.0
AUR62015134 Chenopodium quinoa HOM05D006899 ORTHO05D008566 8.0e-39 164.5 197 57.9
ClCG11G016470 Citrullus lanatus HOM05D006899 ORTHO05D008566 1.0e-38 164.1 154 64.3
Sc13g0007020 Simmondsia chinensis HOM05D006899 ORTHO05D008566 1.4e-38 163.7 165 57.6
CARHR138030 Cardamine hirsuta HOM05D006899 ORTHO05D008566 2.3e-38 162.9 194 54.6
Thhalv10017256m.g Eutrema salsugineum HOM05D006899 ORTHO05D008566 5.2e-38 161.8 123 73.2
THA.LOC104803370 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 5.2e-38 161.8 145 64.1
FAN02G3475 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.9e-38 161.0 125 69.6
FAN14G2046 Fragaria x ananassa HOM05D006899 ORTHO05D008566 8.9e-38 161.0 125 69.6
EL10Ac9g22843 Beta vulgaris HOM05D006899 ORTHO05D008566 1.2e-37 160.6 153 66.7
Actinidia03641 Actinidia chinensis HOM05D006899 ORTHO05D008566 1.5e-37 160.2 126 70.6
Eucgr.A02015 Eucalyptus grandis HOM05D006899 ORTHO05D008566 1.5e-37 160.2 159 64.2
Aqoxy1G02918 Aquilegia oxysepala HOM05D006899 ORTHO05D008566 3.4e-37 159.1 125 68.8
CSS0032532 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 5.7e-37 158.3 150 62.0
THA.LOC104802283 Tarenaya hassleriana HOM05D006899 ORTHO05D008566 9.8e-37 157.5 155 62.6
Duzib138G0065 Durio zibethinus HOM05D006899 ORTHO05D008566 1.7e-36 156.8 136 66.2
AUR62017595 Chenopodium quinoa HOM05D006899 ORTHO05D008566 3.7e-36 155.6 197 54.8
Dinv09142 Davidia involucrata HOM05D006899 ORTHO05D008566 1.8e-35 153.3 125 69.6
ECA233G0523 Erigeron canadensis HOM05D006899 ORTHO05D008566 1.8e-35 153.3 144 65.3
HanXRQChr17g0554721 Helianthus annuus HOM05D006899 ORTHO05D008566 7.0e-35 151.4 140 62.9
Lalb_Chr04g0248871 Lupinus albus HOM05D006899 ORTHO05D008566 1.6e-34 150.2 98 78.6
Lj1P601T16 Lonicera japonica HOM05D006899 ORTHO05D008566 7.8e-34 147.9 89 84.3
MBI10_g21113_MAGBIO Magnolia biondii HOM05D006899 ORTHO05D008566 1.7e-33 146.7 193 53.9
Ah.01g013620 Amaranthus hybridus HOM05D006899 ORTHO05D008566 3.9e-33 145.6 100 79.0
Lsat_1_v5_gn_8_137860 Lactuca sativa HOM05D006899 ORTHO05D008566 2.1e-31 139.8 140 60.7
CSS0025344 Camellia sinensis var. sinensis HOM05D006899 ORTHO05D008566 2.3e-30 136.3 148 56.1
Duzib133G1045 Durio zibethinus HOM05D006899 ORTHO05D008566 1.7e-28 130.2 187 47.1
PSO478G1301 Papaver somniferum HOM05D006899 ORTHO05D008566 2.4e-27 126.3 145 56.6
PSO675G8667 Papaver somniferum HOM05D006899 ORTHO05D008566 2.4e-27 126.3 145 56.6
Os01g0666600 Oryza sativa ssp. japonica HOM05D006899 ORTHO05D008566 7.0e-27 124.8 161 52.8
PSO541G6147 Papaver somniferum HOM05D006899 ORTHO05D008566 1.7e-25 120.2 125 59.2
HPP92_010055 Vanilla planifolia HOM05D006899 ORTHO05D008566 5.0e-25 118.6 121 57.9
Nitab4.5_0004243g0030 Nicotiana tabacum HOM05D006899 ORTHO05D008566 1.1e-24 117.5 84 75.0
Zm00001eb157430 Zea mays HOM05D006899 ORTHO05D008566 7.3e-24 114.8 133 51.9
ATR0585G139 Amborella trichopoda HOM05D006899 ORTHO05D008566 9.5e-24 114.4 124 55.6
Hund24244 Selenicereus undatus HOM05D006899 ORTHO05D008566 1.6e-23 113.6 97 64.9
CDE05G0801 Ceratophyllum demersum HOM05D006899 ORTHO05D008566 4.7e-23 112.1 125 52.0
Nitab4.5_0004950g0010 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.3e-22 109.8 82 73.2
Nitab4.5_0009604g0020 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.3e-22 109.8 82 73.2
unitig_60.g25592 Utricularia gibba HOM05D006899 ORTHO05D008566 5.2e-22 108.6 157 48.4
Mapoly0120s0054 Marchantia polymorpha HOM05D006899 ORTHO05D008566 1.0e-17 94.4 191 38.2
Pp3c13_6560 Physcomitrium patens HOM05D006899 ORTHO05D008566 6.6e-17 91.7 159 40.9
TWI23G0441 Tripterygium wilfordii HOM05D006899 ORTHO05D008566 1.1e-16 90.9 88 60.2
Nitab4.5_0002251g0080 Nicotiana tabacum HOM05D006899 ORTHO05D008566 2.1e-15 86.7 91 56.0
AagrBONN_evm.TU.Sc2ySwM_368.298 Anthoceros agrestis HOM05D006899 ORTHO05D008566 5.2e-14 82.0 194 35.1
Medtr5g016040 Medicago truncatula HOM05D006899 ORTHO05D008566 1.7e-12 77.0 80 56.2
SMO353G0201 Selaginella moellendorffii HOM05D006899 ORTHO05D008566 3.5e-10 69.3 90 45.6
Medtr7g035145 Medicago truncatula HOM05D006899 ORTHO05D008566 1.1e-06 57.8 69 39.1


User provided reference genes

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