Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 6.1e-83 310.8 164 100.0
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 2.6e-73 278.9 164 88.4
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 4.4e-65 251.5 161 80.1
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 2.8e-64 248.8 165 80.6
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 1.7e-61 239.6 184 71.2
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 3.4e-57 225.3 155 75.5
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 4.1e-55 218.4 157 73.9
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 5.4e-55 218.0 156 70.5
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 1.6e-54 216.5 157 70.7
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 2.0e-54 216.1 158 72.8
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 4.5e-54 214.9 156 69.9
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 1.3e-53 213.4 155 72.3
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.3e-53 213.4 153 70.6
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 1.7e-53 213.0 155 69.0
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 2.3e-53 212.6 158 70.9
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 2.3e-53 212.6 152 73.0
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 2.9e-53 212.2 159 71.1
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 3.8e-53 211.8 157 70.7
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 3.8e-53 211.8 156 69.2
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 6.5e-53 211.1 157 71.3
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 6.5e-53 211.1 155 69.7
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 6.5e-53 211.1 153 71.9
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 2.5e-52 209.1 156 67.9
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 2.5e-52 209.1 154 69.5
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 2.5e-52 209.1 154 69.5
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 2.5e-52 209.1 161 68.3
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 3.3e-52 208.8 159 70.4
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 4.2e-52 208.4 156 67.9
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 7.2e-52 207.6 153 71.2
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 7.2e-52 207.6 157 69.4
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 9.5e-52 207.2 153 71.2
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 1.2e-51 206.8 153 71.2
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 1.2e-51 206.8 153 71.2
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 1.6e-51 206.5 152 69.1
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 2.1e-51 206.1 153 69.9
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 2.8e-51 205.7 153 70.6
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 6.1e-51 204.5 156 66.7
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 6.1e-51 204.5 153 70.6
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 6.1e-51 204.5 148 69.6
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 8.0e-51 204.1 146 71.9
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 8.0e-51 204.1 152 68.4
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 1.0e-50 203.8 146 71.2
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 1.4e-50 203.4 163 66.9
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 1.4e-50 203.4 160 67.5
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 2.3e-50 202.6 153 67.3
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 2.3e-50 202.6 146 70.5
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 3.0e-50 202.2 161 67.1
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 3.0e-50 202.2 156 66.0
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 3.0e-50 202.2 155 67.7
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 5.2e-50 201.4 152 65.8
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 5.2e-50 201.4 152 65.8
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 5.2e-50 201.4 153 66.0
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 1.2e-49 200.3 159 67.9
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 1.2e-49 200.3 153 66.0
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 1.5e-49 199.9 155 68.4
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 1.5e-49 199.9 156 67.3
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 2.0e-49 199.5 156 65.4
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 2.6e-49 199.1 151 66.9
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 5.7e-49 198.0 161 65.2
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 5.7e-49 198.0 161 65.2
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 5.7e-49 198.0 129 77.5
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 7.5e-49 197.6 165 63.0
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 9.8e-49 197.2 168 61.9
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 1.7e-48 196.4 165 62.4
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 1.7e-48 196.4 149 67.1
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 1.7e-48 196.4 127 80.3
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 2.2e-48 196.1 156 67.9
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 3.7e-48 195.3 151 66.9
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 3.7e-48 195.3 147 67.3
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 4.9e-48 194.9 144 68.8
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 6.3e-48 194.5 144 68.8
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 1.8e-47 193.0 152 67.1
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 4.1e-47 191.8 156 66.0
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 5.4e-47 191.4 147 66.7
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 7.0e-47 191.0 149 66.4
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 7.0e-47 191.0 145 69.7
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 7.0e-47 191.0 147 66.0
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 1.2e-46 190.3 190 57.9
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 1.6e-46 189.9 150 66.7
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 2.0e-46 189.5 166 62.7
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 3.5e-46 188.7 166 62.7
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 7.8e-46 187.6 126 77.8
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 1.3e-45 186.8 153 62.1
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 1.7e-45 186.4 166 62.0
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 2.9e-45 185.7 166 61.4
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 2.9e-45 185.7 166 61.4
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 6.6e-45 184.5 190 56.3
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 1.1e-44 183.7 165 60.6
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 1.9e-44 183.0 149 65.1
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 3.3e-44 182.2 152 63.8
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 3.3e-44 182.2 153 62.1
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 5.6e-44 181.4 136 67.6
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 7.3e-44 181.0 117 78.6
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 9.5e-44 180.6 119 75.6
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 9.5e-44 180.6 152 63.8
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 2.1e-43 179.5 163 61.3
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 4.7e-43 178.3 135 68.1
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 8.0e-43 177.6 147 63.9
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 4.0e-42 175.3 153 60.8
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 5.2e-42 174.9 147 63.3
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 5.2e-42 174.9 147 63.3
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 8.9e-42 174.1 130 70.8
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 2.0e-41 172.9 154 60.4
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 9.8e-41 170.6 132 69.7
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 4.9e-40 168.3 150 59.3
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 2.4e-39 166.0 160 58.1
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 6.0e-38 161.4 108 77.8
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 8.6e-37 157.5 130 65.4
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 3.3e-36 155.6 99 78.8
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 5.6e-36 154.8 130 64.6
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 2.3e-34 149.4 110 70.0
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 4.0e-34 148.7 96 77.1
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 1.2e-33 147.1 115 64.3
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 3.4e-33 145.6 129 60.5
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 5.8e-33 144.8 93 77.4
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 6.4e-32 141.4 98 72.4
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 6.4e-32 141.4 99 75.8
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 1.4e-31 140.2 117 60.7
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 1.7e-29 133.3 103 67.0
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 8.6e-29 131.0 126 56.3
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 1.5e-28 130.2 116 53.4
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 2.5e-28 129.4 110 59.1
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 4.0e-26 122.1 84 73.8
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 2.7e-22 109.4 78 74.4
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 1.0e-21 107.5 73 75.3
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.4e-18 97.1 91 58.2
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 8.9e-18 94.4 130 40.8
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 7.6e-17 91.3 59 76.3
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 1.7e-16 90.1 131 42.7
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 9.2e-15 84.3 109 43.1
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 1.2e-14 84.0 123 42.3
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 1.9e-12 76.6 137 40.1
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 1.1e-10 70.9 46 76.1
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 1.7e-08 63.5 49 63.3
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 1.7e-08 63.5 49 63.3
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 2.2e-08 63.2 47 66.0
Prupe.5G038700 Prunus persica HOM05D005569 ORTHO05D007052 5.4e-07 58.5 39 69.2


User provided reference genes

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